RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 KCNQ3O43525 872 aa26.97■■□□□ 1.91
CLN6-201ENST00000249806 RBM25P49756 843 aaKnown RBP26.97■■□□□ 1.91
CLN6-201ENST00000249806 PLEKHO1Q53GL0 409 aaPredicted RBP26.97■■□□□ 1.91
CLN6-201ENST00000249806 PHAXQ9H814 394 aaKnown RBP26.97■■□□□ 1.91
CLN6-201ENST00000249806 AKAP4Q5JQC9 854 aa26.96■■□□□ 1.91
CLN6-201ENST00000249806 SPRYD3Q8NCJ5 442 aa26.96■■□□□ 1.91
CLN6-201ENST00000249806 EIF2S2P20042 333 aaKnown RBP26.96■■□□□ 1.91
CLN6-201ENST00000249806 EIF4A1P60842 406 aaKnown RBP26.96■■□□□ 1.91
CLN6-201ENST00000249806 ANTXR1Q9H6X2 564 aa26.96■■□□□ 1.91
CLN6-201ENST00000249806 GNAI2P04899 355 aa26.95■■□□□ 1.9
CLN6-201ENST00000249806 DDX17Q92841 729 aaKnown RBP26.95■■□□□ 1.9
CLN6-201ENST00000249806 HMMRO75330 724 aa26.94■■□□□ 1.9
CLN6-201ENST00000249806 ZC3H6P61129 1189 aaKnown RBP26.94■■□□□ 1.9
CLN6-201ENST00000249806 TEFQ10587 303 aa26.93■■□□□ 1.9
CLN6-201ENST00000249806 TTC22Q5TAA0 569 aa26.93■■□□□ 1.9
CLN6-201ENST00000249806 MED1Q15648 1581 aaPredicted RBP26.92■■□□□ 1.9
CLN6-201ENST00000249806 BTBD11A6QL63 1104 aa26.92■■□□□ 1.9
CLN6-201ENST00000249806 AMOTQ4VCS5 1084 aa26.92■■□□□ 1.9
CLN6-201ENST00000249806 CDC45O75419 566 aa26.91■■□□□ 1.9
CLN6-201ENST00000249806 ATF3P18847 181 aa26.91■■□□□ 1.9
CLN6-201ENST00000249806 TMEM94Q12767 1356 aa26.91■■□□□ 1.9
CLN6-201ENST00000249806 PXDNQ92626 1479 aa26.91■■□□□ 1.9
CLN6-201ENST00000249806 LMO7Q8WWI1 1683 aa26.9■■□□□ 1.9
CLN6-201ENST00000249806 RGPD5Q99666 1765 aa26.9■■□□□ 1.9
CLN6-201ENST00000249806 C1orf141Q5JVX7 400 aa26.9■■□□□ 1.9
CLN6-201ENST00000249806 KIF1AQ12756 1690 aa26.9■■□□□ 1.9
CLN6-201ENST00000249806 GNAI3P08754 354 aa26.89■■□□□ 1.9
CLN6-201ENST00000249806 NCAPD2Q15021 1401 aa26.89■■□□□ 1.9
CLN6-201ENST00000249806 RNMTO43148 476 aaKnown RBP26.89■■□□□ 1.89
CLN6-201ENST00000249806 EXOC6BQ9Y2D4 811 aa26.89■■□□□ 1.89
CLN6-201ENST00000249806 PNMA6EA0A0J9YXQ4 647 aa26.88■■□□□ 1.89
CLN6-201ENST00000249806 USP44Q9H0E7 712 aa26.88■■□□□ 1.89
CLN6-201ENST00000249806 CHPF2Q9P2E5 772 aa26.88■■□□□ 1.89
CLN6-201ENST00000249806 KDM3BQ7LBC6 1761 aa26.88■■□□□ 1.89
CLN6-201ENST00000249806 KIF2CQ99661 725 aa26.88■■□□□ 1.89
CLN6-201ENST00000249806 MST1RQ04912 1400 aa26.87■■□□□ 1.89
CLN6-201ENST00000249806 STRCP1A6NGW2 1772 aa26.87■■□□□ 1.89
CLN6-201ENST00000249806 DNAJC5Q9H3Z4 198 aa26.86■■□□□ 1.89
CLN6-201ENST00000249806 LRRFIP2Q9Y608 721 aaKnown RBP26.86■■□□□ 1.89
CLN6-201ENST00000249806 ANXA1P04083 346 aa26.85■■□□□ 1.89
CLN6-201ENST00000249806 ATP8B2P98198 1209 aa26.85■■□□□ 1.89
CLN6-201ENST00000249806 ERBB3P21860 1342 aa26.85■■□□□ 1.89
CLN6-201ENST00000249806 SDSP20132 328 aa26.85■■□□□ 1.89
CLN6-201ENST00000249806 HSCBQ8IWL3 235 aa26.85■■□□□ 1.89
CLN6-201ENST00000249806 ALS2Q96Q42 1657 aa26.84■■□□□ 1.89
CLN6-201ENST00000249806 HOXB7P09629 217 aa26.84■■□□□ 1.89
CLN6-201ENST00000249806 HSPA2P54652 639 aa26.82■■□□□ 1.88
CLN6-201ENST00000249806 CABLES1Q8TDN4 633 aa26.82■■□□□ 1.88
CLN6-201ENST00000249806 PXDNLA1KZ92 1463 aa26.82■■□□□ 1.88
CLN6-201ENST00000249806 UBTFL1P0CB47 393 aaPredicted RBP26.81■■□□□ 1.88
CLN6-201ENST00000249806 N4BP2Q86UW6 1770 aaPredicted RBP26.8■■□□□ 1.88
CLN6-201ENST00000249806 PI4KAP2A4QPH2 592 aa26.8■■□□□ 1.88
CLN6-201ENST00000249806 PI4KAP1Q8N8J0 262 aa26.8■■□□□ 1.88
CLN6-201ENST00000249806 SNX21Q969T3 373 aa26.8■■□□□ 1.88
CLN6-201ENST00000249806 SRCIN1Q9C0H9 1055 aa26.8■■□□□ 1.88
CLN6-201ENST00000249806 CAMTA1Q9Y6Y1 1673 aa26.8■■□□□ 1.88
CLN6-201ENST00000249806 PDE1AP54750 535 aa26.8■■□□□ 1.88
CLN6-201ENST00000249806 RBM42Q9BTD8 480 aaKnown RBP26.8■■□□□ 1.88
CLN6-201ENST00000249806 NLRP2Q9NX02 1062 aa26.79■■□□□ 1.88
CLN6-201ENST00000249806 PRAMEF22A3QJZ6 481 aa26.78■■□□□ 1.88
CLN6-201ENST00000249806 LRRCC1Q9C099 1032 aa26.78■■□□□ 1.88
CLN6-201ENST00000249806 GSE1Q14687 1217 aa26.78■■□□□ 1.88
CLN6-201ENST00000249806 TSHZ3Q63HK5 1081 aa26.78■■□□□ 1.88
CLN6-201ENST00000249806 GIGYF1O75420 1035 aaPredicted RBP26.77■■□□□ 1.88
CLN6-201ENST00000249806 DNAAF4Q8WXU2 420 aa26.77■■□□□ 1.88
CLN6-201ENST00000249806 OSBPL3Q9H4L5 887 aa26.77■■□□□ 1.88
CLN6-201ENST00000249806 CD2BP2O95400 341 aaKnown RBP26.77■■□□□ 1.88
CLN6-201ENST00000249806 NBPF7P0C2Y1 421 aaPredicted RBP26.76■■□□□ 1.87
CLN6-201ENST00000249806 BEND3Q5T5X7 828 aa26.76■■□□□ 1.87
CLN6-201ENST00000249806 CHMP4AQ9BY43 222 aa26.76■■□□□ 1.87
CLN6-201ENST00000249806 CADPS2Q86UW7 1296 aa26.75■■□□□ 1.87
CLN6-201ENST00000249806 IBTKQ9P2D0 1353 aaPredicted RBP26.75■■□□□ 1.87
CLN6-201ENST00000249806 RAPGEF4Q8WZA2 1011 aa26.75■■□□□ 1.87
CLN6-201ENST00000249806 DBF4Q9UBU7 674 aaPredicted RBP26.75■■□□□ 1.87
CLN6-201ENST00000249806 CHRNA2Q15822 529 aa26.74■■□□□ 1.87
CLN6-201ENST00000249806 PROSER3Q2NL68 480 aa26.74■■□□□ 1.87
CLN6-201ENST00000249806 DCCP43146 1447 aa26.74■■□□□ 1.87
CLN6-201ENST00000249806 OVOS2A0A0G2JMS6 1433 aa26.74■■□□□ 1.87
CLN6-201ENST00000249806 SALL3Q9BXA9 1300 aa26.74■■□□□ 1.87
CLN6-201ENST00000249806 USP26Q9BXU7 913 aa26.74■■□□□ 1.87
CLN6-201ENST00000249806 ADCY9O60503 1353 aa26.73■■□□□ 1.87
CLN6-201ENST00000249806 NPHP3Q7Z494 1330 aa26.73■■□□□ 1.87
CLN6-201ENST00000249806 PPP1R42Q7Z4L9 355 aa26.73■■□□□ 1.87
CLN6-201ENST00000249806 HEG1Q9ULI3 1381 aa26.73■■□□□ 1.87
CLN6-201ENST00000249806 CHMP5Q9NZZ3 219 aa26.73■■□□□ 1.87
CLN6-201ENST00000249806 SSH3Q8TE77 659 aa26.72■■□□□ 1.87
CLN6-201ENST00000249806 NCOA3Q9Y6Q9 1424 aa26.71■■□□□ 1.87
CLN6-201ENST00000249806 CSB-PGBD3P0DP91 1061 aa26.71■■□□□ 1.87
CLN6-201ENST00000249806 CASC1Q6TDU7 716 aa26.71■■□□□ 1.87
CLN6-201ENST00000249806 SIPA1L3O60292 1781 aaPredicted RBP26.71■■□□□ 1.87
CLN6-201ENST00000249806 HSP90AB1P08238 724 aaKnown RBP26.7■■□□□ 1.87
CLN6-201ENST00000249806 MX1P20591 662 aa26.7■■□□□ 1.86
CLN6-201ENST00000249806 SLC39A6Q13433 755 aa26.7■■□□□ 1.86
CLN6-201ENST00000249806 TATP17735 454 aaPredicted RBP26.69■■□□□ 1.86
CLN6-201ENST00000249806 COL18A1P39060 1754 aa26.69■■□□□ 1.86
CLN6-201ENST00000249806 EIF5BO60841 1220 aaKnown RBP26.69■■□□□ 1.86
CLN6-201ENST00000249806 IL1RAPL2Q9NP60 686 aa26.69■■□□□ 1.86
CLN6-201ENST00000249806 MAP3K2Q9Y2U5 619 aa26.69■■□□□ 1.86
CLN6-201ENST00000249806 TNS3Q68CZ2 1445 aa26.68■■□□□ 1.86
CLN6-201ENST00000249806 SRGAP3O43295 1099 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms