RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 TRAK2O60296 914 aa7.97□□□□□ -1.13
AFP-201ENST00000226359 RBM6P78332 1123 aaKnown RBP7.97□□□□□ -1.13
AFP-201ENST00000226359 COL22A1Q8NFW1 1626 aaPredicted RBP7.97□□□□□ -1.13
AFP-201ENST00000226359 FBXW7Q969H0 707 aa7.96□□□□□ -1.13
AFP-201ENST00000226359 ZDHHC16Q969W1 377 aa7.96□□□□□ -1.13
AFP-201ENST00000226359 CARD11Q9BXL7 1154 aa7.96□□□□□ -1.13
AFP-201ENST00000226359 QTRT2Q9H974 415 aaKnown RBP7.96□□□□□ -1.13
AFP-201ENST00000226359 ATP7BP35670 1465 aa7.96□□□□□ -1.14
AFP-201ENST00000226359 CDK12Q9NYV4 1490 aaPredicted RBP7.96□□□□□ -1.14
AFP-201ENST00000226359 PRR36Q9H6K5 1346 aa7.95□□□□□ -1.14
AFP-201ENST00000226359 ITSN1Q15811 1721 aa7.95□□□□□ -1.14
AFP-201ENST00000226359 FAM161AQ3B820 660 aa7.95□□□□□ -1.14
AFP-201ENST00000226359 C6orf132Q5T0Z8 1188 aa7.95□□□□□ -1.14
AFP-201ENST00000226359 CCER1Q8TC90 406 aaPredicted RBP7.95□□□□□ -1.14
AFP-201ENST00000226359 CLSPNQ9HAW4 1339 aa7.95□□□□□ -1.14
AFP-201ENST00000226359 TK2O00142 265 aa7.94□□□□□ -1.14
AFP-201ENST00000226359 BRD4O60885 1362 aaPredicted RBP7.94□□□□□ -1.14
AFP-201ENST00000226359 ATAD2Q6PL18 1390 aa7.94□□□□□ -1.14
AFP-201ENST00000226359 RALGAPBQ86X10 1494 aa7.94□□□□□ -1.14
AFP-201ENST00000226359 TRPM1Q7Z4N2 1603 aa7.94□□□□□ -1.14
AFP-201ENST00000226359 PPIP5K1Q6PFW1 1433 aa7.94□□□□□ -1.14
AFP-201ENST00000226359 A6NJR5 290 aa7.93□□□□□ -1.14
AFP-201ENST00000226359 AMHR2Q16671 573 aa7.93□□□□□ -1.14
AFP-201ENST00000226359 FNBP4Q8N3X1 1017 aaPredicted RBP7.93□□□□□ -1.14
AFP-201ENST00000226359 ACEP12821 1306 aa7.93□□□□□ -1.14
AFP-201ENST00000226359 LAPTM4AQ15012 233 aa7.93□□□□□ -1.14
AFP-201ENST00000226359 USP32Q8NFA0 1604 aa7.93□□□□□ -1.14
AFP-201ENST00000226359 ATRNO75882 1429 aa7.92□□□□□ -1.14
AFP-201ENST00000226359 UNC5CLQ8IV45 518 aa7.92□□□□□ -1.14
AFP-201ENST00000226359 PRDM11Q9NQV5 511 aa7.92□□□□□ -1.14
AFP-201ENST00000226359 QRICH2Q9H0J4 1663 aa7.92□□□□□ -1.14
AFP-201ENST00000226359 POLR3AO14802 1390 aaPredicted RBP7.92□□□□□ -1.14
AFP-201ENST00000226359 NBPF8Q3BBV2 869 aa7.91□□□□□ -1.14
AFP-201ENST00000226359 PADI6Q6TGC4 694 aa7.91□□□□□ -1.14
AFP-201ENST00000226359 SBNO2Q9Y2G9 1366 aa7.91□□□□□ -1.14
AFP-201ENST00000226359 MYT1Q01538 1121 aa7.91□□□□□ -1.14
AFP-201ENST00000226359 PHOX2BQ99453 314 aa7.91□□□□□ -1.14
AFP-201ENST00000226359 HDGFL2Q7Z4V5 671 aaPredicted RBP7.9□□□□□ -1.14
AFP-201ENST00000226359 NLRP13Q86W25 1043 aa7.9□□□□□ -1.14
AFP-201ENST00000226359 ABTB2Q8N961 1025 aa7.9□□□□□ -1.14
AFP-201ENST00000226359 CABLES1Q8TDN4 633 aa7.9□□□□□ -1.14
AFP-201ENST00000226359 NLRP7Q8WX94 980 aa7.9□□□□□ -1.14
AFP-201ENST00000226359 KCTD12Q96CX2 325 aaKnown RBP7.9□□□□□ -1.14
AFP-201ENST00000226359 RGS12O14924 1447 aa7.9□□□□□ -1.14
AFP-201ENST00000226359 TOPAZ1Q8N9V7 1692 aa7.9□□□□□ -1.15
AFP-201ENST00000226359 ARHGAP33O14559 1287 aa7.9□□□□□ -1.15
AFP-201ENST00000226359 COL9A1P20849 921 aa7.9□□□□□ -1.15
AFP-201ENST00000226359 TTLL12Q14166 644 aaPredicted RBP7.9□□□□□ -1.15
AFP-201ENST00000226359 PPP4R3BQ5MIZ7 849 aa7.9□□□□□ -1.15
AFP-201ENST00000226359 KCTD17Q8N5Z5 321 aa7.9□□□□□ -1.15
AFP-201ENST00000226359 GJD4Q96KN9 370 aaPredicted RBP7.9□□□□□ -1.15
AFP-201ENST00000226359 SLIT2O94813 1529 aa7.89□□□□□ -1.15
AFP-201ENST00000226359 MCM6Q14566 821 aa7.89□□□□□ -1.15
AFP-201ENST00000226359 VPS72Q15906 364 aa7.89□□□□□ -1.15
AFP-201ENST00000226359 REPIN1Q9BWE0 567 aaKnown RBP7.89□□□□□ -1.15
AFP-201ENST00000226359 CABP1Q9NZU7 370 aa7.89□□□□□ -1.15
AFP-201ENST00000226359 TTC21AQ8NDW8 1320 aa7.88□□□□□ -1.15
AFP-201ENST00000226359 MS4A1P11836 297 aa7.88□□□□□ -1.15
AFP-201ENST00000226359 USP6P35125 1406 aa7.88□□□□□ -1.15
AFP-201ENST00000226359 CDCA8Q53HL2 280 aa7.88□□□□□ -1.15
AFP-201ENST00000226359 NUTM2GQ5VZR2 741 aa7.88□□□□□ -1.15
AFP-201ENST00000226359 TMC1Q8TDI8 760 aa7.88□□□□□ -1.15
AFP-201ENST00000226359 TRPM3Q9HCF6 1732 aaPredicted RBP7.88□□□□□ -1.15
AFP-201ENST00000226359 TERF2IPQ9NYB0 399 aa7.88□□□□□ -1.15
AFP-201ENST00000226359 AXIN2Q9Y2T1 843 aa7.88□□□□□ -1.15
AFP-201ENST00000226359 NINLQ9Y2I6 1382 aa7.88□□□□□ -1.15
AFP-201ENST00000226359 RGPD8O14715 1765 aaPredicted RBP7.88□□□□□ -1.15
AFP-201ENST00000226359 BCL9LQ86UU0 1499 aa7.88□□□□□ -1.15
AFP-201ENST00000226359 BCL2L12Q9HB09 334 aa7.88□□□□□ -1.15
AFP-201ENST00000226359 GOPCQ9HD26 462 aa7.88□□□□□ -1.15
AFP-201ENST00000226359 BTG4Q9NY30 223 aa7.88□□□□□ -1.15
AFP-201ENST00000226359 ALS2Q96Q42 1657 aa7.87□□□□□ -1.15
AFP-201ENST00000226359 COL14A1Q05707 1796 aaKnown RBP7.87□□□□□ -1.15
AFP-201ENST00000226359 HRO43593 1189 aa7.87□□□□□ -1.15
AFP-201ENST00000226359 EVA1CP58658 441 aa7.87□□□□□ -1.15
AFP-201ENST00000226359 POTEEQ6S8J3 1075 aa7.87□□□□□ -1.15
AFP-201ENST00000226359 CDCA7LQ96GN5 454 aa7.87□□□□□ -1.15
AFP-201ENST00000226359 POM121Q96HA1 1249 aa7.87□□□□□ -1.15
AFP-201ENST00000226359 PUS7Q96PZ0 661 aaKnown RBP7.87□□□□□ -1.15
AFP-201ENST00000226359 KTN1Q86UP2 1357 aaKnown RBP7.87□□□□□ -1.15
AFP-201ENST00000226359 KIAA0232Q92628 1395 aa7.87□□□□□ -1.15
AFP-201ENST00000226359 USP47Q96K76 1375 aa7.87□□□□□ -1.15
AFP-201ENST00000226359 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.87□□□□□ -1.15
AFP-201ENST00000226359 MARF1Q9Y4F3 1742 aaKnown RBP7.87□□□□□ -1.15
AFP-201ENST00000226359 USP19O94966 1318 aa7.86□□□□□ -1.15
AFP-201ENST00000226359 PSDA5PKW4 1024 aaPredicted RBP7.86□□□□□ -1.15
AFP-201ENST00000226359 TMF1P82094 1093 aa7.86□□□□□ -1.15
AFP-201ENST00000226359 SF3B2Q13435 895 aaKnown RBP7.86□□□□□ -1.15
AFP-201ENST00000226359 METTL3Q86U44 580 aaKnown RBP7.86□□□□□ -1.15
AFP-201ENST00000226359 KCNH5Q8NCM2 988 aa7.86□□□□□ -1.15
AFP-201ENST00000226359 PCMTD1Q96MG8 357 aaPredicted RBP7.86□□□□□ -1.15
AFP-201ENST00000226359 FAM198AQ9UFP1 575 aa7.86□□□□□ -1.15
AFP-201ENST00000226359 ABCA3Q99758 1704 aa7.86□□□□□ -1.15
AFP-201ENST00000226359 NWD2Q9ULI1 1742 aa7.86□□□□□ -1.15
AFP-201ENST00000226359 FAM83GA6ND36 823 aa7.86□□□□□ -1.15
AFP-201ENST00000226359 PRSS12P56730 875 aa7.86□□□□□ -1.15
AFP-201ENST00000226359 ZC3H6P61129 1189 aaKnown RBP7.86□□□□□ -1.15
AFP-201ENST00000226359 GIGYF2Q6Y7W6 1299 aaKnown RBP7.86□□□□□ -1.15
AFP-201ENST00000226359 AEBP1Q8IUX7 1158 aa7.86□□□□□ -1.15
AFP-201ENST00000226359 STRN4Q9NRL3 753 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms