RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 PDCL2Q8N4E4 241 aa9.61□□□□□ -0.87
SCG3-201ENST00000220478 KDM4CQ9H3R0 1056 aa9.61□□□□□ -0.87
SCG3-201ENST00000220478 UNCXA6NJT0 531 aa9.6□□□□□ -0.87
SCG3-201ENST00000220478 ADCY5O95622 1261 aa9.6□□□□□ -0.87
SCG3-201ENST00000220478 IPO4Q8TEX9 1081 aaKnown RBP9.6□□□□□ -0.87
SCG3-201ENST00000220478 KIF20BQ96Q89 1820 aa9.6□□□□□ -0.87
SCG3-201ENST00000220478 TSPYL6Q8N831 410 aa9.6□□□□□ -0.87
SCG3-201ENST00000220478 EFCAB6Q5THR3 1501 aa9.6□□□□□ -0.87
SCG3-201ENST00000220478 RTL1A6NKG5 1358 aa9.59□□□□□ -0.87
SCG3-201ENST00000220478 MBD3O95983 291 aa9.59□□□□□ -0.87
SCG3-201ENST00000220478 SDSP20132 328 aa9.59□□□□□ -0.87
SCG3-201ENST00000220478 TMX3Q96JJ7 454 aa9.59□□□□□ -0.87
SCG3-201ENST00000220478 GDPD2Q9HCC8 539 aa9.59□□□□□ -0.87
SCG3-201ENST00000220478 PNPLA6Q8IY17 1366 aa9.59□□□□□ -0.87
SCG3-201ENST00000220478 FAM135BQ49AJ0 1406 aa9.59□□□□□ -0.87
SCG3-201ENST00000220478 FANCAO15360 1455 aa9.59□□□□□ -0.87
SCG3-201ENST00000220478 VAMP4O75379 141 aa9.59□□□□□ -0.87
SCG3-201ENST00000220478 ZMYND10O75800 440 aa9.59□□□□□ -0.87
SCG3-201ENST00000220478 NAA30Q147X3 362 aaPredicted RBP9.59□□□□□ -0.87
SCG3-201ENST00000220478 SETD1AO15047 1707 aaKnown RBP9.58□□□□□ -0.88
SCG3-201ENST00000220478 NSD2O96028 1365 aa9.58□□□□□ -0.88
SCG3-201ENST00000220478 ERBB3P21860 1342 aa9.58□□□□□ -0.88
SCG3-201ENST00000220478 UVSSAQ2YD98 709 aa9.58□□□□□ -0.88
SCG3-201ENST00000220478 IL17RAQ96F46 866 aa9.58□□□□□ -0.88
SCG3-201ENST00000220478 DCTPP1Q9H773 170 aa9.58□□□□□ -0.88
SCG3-201ENST00000220478 CGNQ9P2M7 1197 aaKnown RBP9.58□□□□□ -0.88
SCG3-201ENST00000220478 TMEM87AQ8NBN3 555 aa9.58□□□□□ -0.88
SCG3-201ENST00000220478 CAPN2P17655 700 aa9.57□□□□□ -0.88
SCG3-201ENST00000220478 ARHGAP45Q92619 1136 aa9.57□□□□□ -0.88
SCG3-201ENST00000220478 DDX41Q9UJV9 622 aaKnown RBP9.57□□□□□ -0.88
SCG3-201ENST00000220478 CLTCQ00610 1675 aaKnown RBP9.57□□□□□ -0.88
SCG3-201ENST00000220478 USP48Q86UV5 1035 aa9.57□□□□□ -0.88
SCG3-201ENST00000220478 PALD1Q9ULE6 856 aa9.57□□□□□ -0.88
SCG3-201ENST00000220478 RIPOR2Q9Y4F9 1068 aa9.57□□□□□ -0.88
SCG3-201ENST00000220478 TULP2O00295 520 aa9.57□□□□□ -0.88
SCG3-201ENST00000220478 FEZ1Q99689 392 aa9.57□□□□□ -0.88
SCG3-201ENST00000220478 OGFRQ9NZT2 677 aa9.57□□□□□ -0.88
SCG3-201ENST00000220478 HCLS1P14317 486 aaPredicted RBP9.56□□□□□ -0.88
SCG3-201ENST00000220478 MORC2Q9Y6X9 1032 aaPredicted RBP9.56□□□□□ -0.88
SCG3-201ENST00000220478 MAP2P11137 1827 aaKnown RBP9.56□□□□□ -0.88
SCG3-201ENST00000220478 SPAG9O60271 1321 aaKnown RBP9.56□□□□□ -0.88
SCG3-201ENST00000220478 IPO8O15397 1037 aaKnown RBP9.56□□□□□ -0.88
SCG3-201ENST00000220478 DNTTIP2Q5QJE6 756 aaKnown RBP9.56□□□□□ -0.88
SCG3-201ENST00000220478 EXOC8Q8IYI6 725 aa9.56□□□□□ -0.88
SCG3-201ENST00000220478 ABCA9Q8IUA7 1624 aa9.56□□□□□ -0.88
SCG3-201ENST00000220478 A0A1W2PP64 1363 aa9.56□□□□□ -0.88
SCG3-201ENST00000220478 DCAF8L1A6NGE4 600 aa9.56□□□□□ -0.88
SCG3-201ENST00000220478 PTMAP06454 111 aaKnown RBP9.55□□□□□ -0.88
SCG3-201ENST00000220478 SLC20A2Q08357 652 aa9.55□□□□□ -0.88
SCG3-201ENST00000220478 FAM43BQ6ZT52 329 aaPredicted RBP9.55□□□□□ -0.88
SCG3-201ENST00000220478 MAFGO15525 162 aa9.55□□□□□ -0.88
SCG3-201ENST00000220478 ZNF853P0CG23 659 aa9.55□□□□□ -0.88
SCG3-201ENST00000220478 TERF2Q15554 542 aa9.55□□□□□ -0.88
SCG3-201ENST00000220478 TAF3Q5VWG9 929 aa9.55□□□□□ -0.88
SCG3-201ENST00000220478 SPATA32Q96LK8 384 aa9.55□□□□□ -0.88
SCG3-201ENST00000220478 SIGLEC1Q9BZZ2 1709 aa9.55□□□□□ -0.88
SCG3-201ENST00000220478 SALL3Q9BXA9 1300 aa9.55□□□□□ -0.88
SCG3-201ENST00000220478 GABPB1Q06547 395 aaPredicted RBP9.54□□□□□ -0.88
SCG3-201ENST00000220478 SYCP1Q15431 976 aa9.54□□□□□ -0.88
SCG3-201ENST00000220478 INTS3Q68E01 1043 aaKnown RBP9.54□□□□□ -0.88
SCG3-201ENST00000220478 FAM184AQ8NB25 1140 aa9.54□□□□□ -0.88
SCG3-201ENST00000220478 CFAP53Q96M91 514 aa9.54□□□□□ -0.88
SCG3-201ENST00000220478 ST18O60284 1047 aa9.54□□□□□ -0.88
SCG3-201ENST00000220478 ANKRD13AQ8IZ07 590 aa9.54□□□□□ -0.88
SCG3-201ENST00000220478 KIF18AQ8NI77 898 aa9.54□□□□□ -0.88
SCG3-201ENST00000220478 U3KPZ7 1027 aaPredicted RBP9.54□□□□□ -0.88
SCG3-201ENST00000220478 PIK3C2BO00750 1634 aa9.54□□□□□ -0.88
SCG3-201ENST00000220478 FLIIQ13045 1269 aa9.54□□□□□ -0.88
SCG3-201ENST00000220478 IL25Q9H293 177 aa9.54□□□□□ -0.88
SCG3-201ENST00000220478 AMOTL2Q9Y2J4 779 aa9.54□□□□□ -0.88
SCG3-201ENST00000220478 CRYBG1Q9Y4K1 1723 aa9.53□□□□□ -0.88
SCG3-201ENST00000220478 KIF24Q5T7B8 1368 aa9.53□□□□□ -0.88
SCG3-201ENST00000220478 ERCC6L2Q5T890 1561 aa9.53□□□□□ -0.88
SCG3-201ENST00000220478 GPATCH11Q8N954 259 aa9.53□□□□□ -0.88
SCG3-201ENST00000220478 INTS4Q96HW7 963 aaKnown RBP9.53□□□□□ -0.88
SCG3-201ENST00000220478 SRCIN1Q9C0H9 1055 aa9.53□□□□□ -0.88
SCG3-201ENST00000220478 THUMPD2Q9BTF0 503 aaKnown RBP9.53□□□□□ -0.88
SCG3-201ENST00000220478 ST7Q9NRC1 585 aa9.53□□□□□ -0.88
SCG3-201ENST00000220478 TRAK1Q9UPV9 953 aa9.53□□□□□ -0.88
SCG3-201ENST00000220478 CFAP65Q6ZU64 1925 aaKnown RBP9.52□□□□□ -0.88
SCG3-201ENST00000220478 FRMPD1Q5SYB0 1578 aa9.52□□□□□ -0.88
SCG3-201ENST00000220478 ABCC3O15438 1527 aa9.52□□□□□ -0.89
SCG3-201ENST00000220478 MARCH6O60337 910 aa9.52□□□□□ -0.89
SCG3-201ENST00000220478 MX1P20591 662 aa9.52□□□□□ -0.89
SCG3-201ENST00000220478 KRT24Q2M2I5 525 aa9.52□□□□□ -0.89
SCG3-201ENST00000220478 NFATC2IPQ8NCF5 419 aa9.52□□□□□ -0.89
SCG3-201ENST00000220478 IGSF5Q9NSI5 407 aa9.52□□□□□ -0.89
SCG3-201ENST00000220478 CDK12Q9NYV4 1490 aaPredicted RBP9.52□□□□□ -0.89
SCG3-201ENST00000220478 KIAA0232Q92628 1395 aa9.52□□□□□ -0.89
SCG3-201ENST00000220478 ATP7AQ04656 1500 aa9.52□□□□□ -0.89
SCG3-201ENST00000220478 LMTK2Q8IWU2 1503 aa9.52□□□□□ -0.89
SCG3-201ENST00000220478 ONECUT3O60422 494 aaPredicted RBP9.52□□□□□ -0.89
SCG3-201ENST00000220478 CCDC183Q5T5S1 534 aa9.52□□□□□ -0.89
SCG3-201ENST00000220478 CCDC97Q96F63 343 aaPredicted RBP9.52□□□□□ -0.89
SCG3-201ENST00000220478 PHACTR3Q96KR7 559 aa9.52□□□□□ -0.89
SCG3-201ENST00000220478 C14orf93Q9H972 538 aaKnown RBP9.52□□□□□ -0.89
SCG3-201ENST00000220478 CNPY2Q9Y2B0 182 aa9.52□□□□□ -0.89
SCG3-201ENST00000220478 N4BP2Q86UW6 1770 aaPredicted RBP9.51□□□□□ -0.89
SCG3-201ENST00000220478 RBM6P78332 1123 aaKnown RBP9.51□□□□□ -0.89
SCG3-201ENST00000220478 MKRN4PQ13434 485 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms