RNA–Protein interactions for RNA: ENST00000216455.8

PSMA3-201, Transcript of proteasome subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA3, Length 970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-201ENST00000216455 WDR97A6NE52 1622 aa10.59□□□□□ -0.71
PSMA3-201ENST00000216455 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.59□□□□□ -0.71
PSMA3-201ENST00000216455 A0A1W2PRU2 124 aa10.59□□□□□ -0.71
PSMA3-201ENST00000216455 RASA1P20936 1047 aa10.59□□□□□ -0.71
PSMA3-201ENST00000216455 POLMQ9NP87 494 aaPredicted RBP10.59□□□□□ -0.71
PSMA3-201ENST00000216455 GMPR2Q9P2T1 348 aaKnown RBP10.59□□□□□ -0.71
PSMA3-201ENST00000216455 PCDHGA11Q9Y5H2 935 aa10.59□□□□□ -0.71
PSMA3-201ENST00000216455 GNRH1P01148 92 aa10.58□□□□□ -0.72
PSMA3-201ENST00000216455 CLDN10P78369 228 aa10.58□□□□□ -0.72
PSMA3-201ENST00000216455 KANK4Q5T7N3 995 aaPredicted RBP10.58□□□□□ -0.72
PSMA3-201ENST00000216455 OGFOD1Q8N543 542 aa10.58□□□□□ -0.72
PSMA3-201ENST00000216455 DNAAF2Q9NVR5 837 aaKnown RBP10.58□□□□□ -0.72
PSMA3-201ENST00000216455 SOGA1O94964 1423 aa10.58□□□□□ -0.72
PSMA3-201ENST00000216455 SYNJ1O43426 1573 aa10.57□□□□□ -0.72
PSMA3-201ENST00000216455 ATP1A2P50993 1020 aa10.57□□□□□ -0.72
PSMA3-201ENST00000216455 LARP1Q6PKG0 1096 aaKnown RBP10.57□□□□□ -0.72
PSMA3-201ENST00000216455 NLRP3Q96P20 1036 aa10.57□□□□□ -0.72
PSMA3-201ENST00000216455 KIAA1024Q9UPX6 916 aa10.57□□□□□ -0.72
PSMA3-201ENST00000216455 SPINT1O43278 529 aa10.56□□□□□ -0.72
PSMA3-201ENST00000216455 CTSOP43234 321 aaPredicted RBP10.56□□□□□ -0.72
PSMA3-201ENST00000216455 TPCN2Q8NHX9 752 aa10.56□□□□□ -0.72
PSMA3-201ENST00000216455 ETNK1Q9HBU6 452 aa10.56□□□□□ -0.72
PSMA3-201ENST00000216455 ZNF608Q9ULD9 1512 aaPredicted RBP10.56□□□□□ -0.72
PSMA3-201ENST00000216455 RAD54L2Q9Y4B4 1467 aa10.55□□□□□ -0.72
PSMA3-201ENST00000216455 POTECB2RU33 542 aa10.55□□□□□ -0.72
PSMA3-201ENST00000216455 GDF10P55107 478 aa10.55□□□□□ -0.72
PSMA3-201ENST00000216455 CRTC2Q53ET0 693 aaPredicted RBP10.55□□□□□ -0.72
PSMA3-201ENST00000216455 FIGNL2A6NMB9 653 aa10.54□□□□□ -0.72
PSMA3-201ENST00000216455 EIF4G3O43432 1585 aaKnown RBP10.54□□□□□ -0.72
PSMA3-201ENST00000216455 IL2RAP01589 272 aa10.54□□□□□ -0.72
PSMA3-201ENST00000216455 SCNN1DP51172 638 aa10.54□□□□□ -0.72
PSMA3-201ENST00000216455 CLN3Q13286 438 aa10.54□□□□□ -0.72
PSMA3-201ENST00000216455 ESCO1Q5FWF5 840 aa10.54□□□□□ -0.72
PSMA3-201ENST00000216455 CCDC102BQ68D86 513 aa10.54□□□□□ -0.72
PSMA3-201ENST00000216455 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.54□□□□□ -0.72
PSMA3-201ENST00000216455 CNKSR1Q969H4 720 aa10.54□□□□□ -0.72
PSMA3-201ENST00000216455 SENP2Q9HC62 589 aa10.54□□□□□ -0.72
PSMA3-201ENST00000216455 SERTAD1Q9UHV2 236 aa10.54□□□□□ -0.72
PSMA3-201ENST00000216455 RBM19Q9Y4C8 960 aaKnown RBP10.54□□□□□ -0.72
PSMA3-201ENST00000216455 ABCA10Q8WWZ4 1543 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 TTLL8A6PVC2 850 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 SOBPA7XYQ1 873 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 USP17L15C9J2P7 530 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 USP17L10C9JJH3 530 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 USP17L13C9JLJ4 530 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 C11orf95C9JLR9 678 aaPredicted RBP10.53□□□□□ -0.72
PSMA3-201ENST00000216455 USP17L12C9JPN9 530 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 USP17L11C9JVI0 530 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 USP17L21D6R901 530 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 USP17L18D6R9N7 530 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 USP17L22D6RA61 530 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 USP17L17D6RBQ6 530 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 USP17L19D6RCP7 530 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 USP17L20D6RJB6 530 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 ZBTB7BO15156 539 aaPredicted RBP10.53□□□□□ -0.72
PSMA3-201ENST00000216455 USP17L24Q0WX57 530 aa10.53□□□□□ -0.72
PSMA3-201ENST00000216455 LARGE2Q8N3Y3 721 aa10.52□□□□□ -0.73
PSMA3-201ENST00000216455 PBXIP1Q96AQ6 731 aa10.52□□□□□ -0.73
PSMA3-201ENST00000216455 ESYT1Q9BSJ8 1104 aa10.52□□□□□ -0.73
PSMA3-201ENST00000216455 TMEM229AB2RXF0 380 aa10.51□□□□□ -0.73
PSMA3-201ENST00000216455 MAN1A2O60476 641 aa10.51□□□□□ -0.73
PSMA3-201ENST00000216455 INHAP05111 366 aa10.51□□□□□ -0.73
PSMA3-201ENST00000216455 SNRPBP14678 240 aaKnown RBP10.51□□□□□ -0.73
PSMA3-201ENST00000216455 PTK7Q13308 1070 aa10.51□□□□□ -0.73
PSMA3-201ENST00000216455 SLC27A3Q5K4L6 730 aa10.51□□□□□ -0.73
PSMA3-201ENST00000216455 FOXD4L5Q5VV16 416 aaPredicted RBP10.51□□□□□ -0.73
PSMA3-201ENST00000216455 KIFC2Q96AC6 838 aa10.51□□□□□ -0.73
PSMA3-201ENST00000216455 TRIM47Q96LD4 638 aa10.51□□□□□ -0.73
PSMA3-201ENST00000216455 SOS2Q07890 1332 aaPredicted RBP10.51□□□□□ -0.73
PSMA3-201ENST00000216455 AQRO60306 1485 aaKnown RBP eCLIP10.5□□□□□ -0.731e-10■■■■■ 54.7
PSMA3-201ENST00000216455 SFI1A8K8P3 1242 aa10.5□□□□□ -0.73
PSMA3-201ENST00000216455 XAGE2Q96GT9 111 aa10.5□□□□□ -0.73
PSMA3-201ENST00000216455 ZNF358Q9NW07 568 aa10.5□□□□□ -0.73
PSMA3-201ENST00000216455 ABCA5Q8WWZ7 1642 aa10.49□□□□□ -0.73
PSMA3-201ENST00000216455 FAM196BA6NMK8 535 aa10.49□□□□□ -0.73
PSMA3-201ENST00000216455 SRPK2P78362 688 aaKnown RBP10.49□□□□□ -0.73
PSMA3-201ENST00000216455 CENPCQ03188 943 aa10.49□□□□□ -0.73
PSMA3-201ENST00000216455 DPYDQ12882 1025 aa10.49□□□□□ -0.73
PSMA3-201ENST00000216455 TLR1Q15399 786 aa10.49□□□□□ -0.73
PSMA3-201ENST00000216455 RNF217Q8TC41 542 aa10.49□□□□□ -0.73
PSMA3-201ENST00000216455 DNMT3LQ9UJW3 386 aa10.49□□□□□ -0.73
PSMA3-201ENST00000216455 RNF144AP50876 292 aaPredicted RBP10.48□□□□□ -0.73
PSMA3-201ENST00000216455 ZNF787Q6DD87 383 aa10.48□□□□□ -0.73
PSMA3-201ENST00000216455 PRICKLE2Q7Z3G6 844 aa10.48□□□□□ -0.73
PSMA3-201ENST00000216455 ANKMY2Q8IV38 441 aa10.48□□□□□ -0.73
PSMA3-201ENST00000216455 SIX5Q8N196 739 aa10.48□□□□□ -0.73
PSMA3-201ENST00000216455 NOVA2Q9UNW9 492 aaKnown RBP10.48□□□□□ -0.73
PSMA3-201ENST00000216455 TDRD9Q8NDG6 1382 aaKnown RBP10.48□□□□□ -0.73
PSMA3-201ENST00000216455 GRIN2BQ13224 1484 aa10.47□□□□□ -0.73
PSMA3-201ENST00000216455 GAPVD1Q14C86 1478 aa10.47□□□□□ -0.73
PSMA3-201ENST00000216455 BACH1O14867 736 aa10.46□□□□□ -0.73
PSMA3-201ENST00000216455 LGR5O75473 907 aa10.46□□□□□ -0.73
PSMA3-201ENST00000216455 SEC13P55735 322 aa10.46□□□□□ -0.73
PSMA3-201ENST00000216455 TNS4Q8IZW8 715 aa10.46□□□□□ -0.73
PSMA3-201ENST00000216455 TSEN2Q8NCE0 465 aaKnown RBP10.46□□□□□ -0.73
PSMA3-201ENST00000216455 ZSCAN10Q96SZ4 725 aaPredicted RBP10.46□□□□□ -0.73
PSMA3-201ENST00000216455 WASLO00401 505 aaPredicted RBP10.45□□□□□ -0.74
PSMA3-201ENST00000216455 DKK1O94907 266 aa10.45□□□□□ -0.74
PSMA3-201ENST00000216455 RHOQP17081 205 aa10.45□□□□□ -0.74
PSMA3-201ENST00000216455 GTF2E1P29083 439 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms