RNA–Protein interactions for RNA: ENST00000216121.11

NIPSNAP1-201, Transcript of nipsnap homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP1, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-201ENST00000216121 LTN1O94822 1766 aa27.18■■□□□ 1.94
NIPSNAP1-201ENST00000216121 ATP8B2P98198 1209 aa27.17■■□□□ 1.94
NIPSNAP1-201ENST00000216121 IP6K1Q92551 441 aa27.17■■□□□ 1.94
NIPSNAP1-201ENST00000216121 PXDNLA1KZ92 1463 aa27.16■■□□□ 1.94
NIPSNAP1-201ENST00000216121 REC8O95072 547 aa27.16■■□□□ 1.94
NIPSNAP1-201ENST00000216121 FOXD4L1Q9NU39 408 aa27.16■■□□□ 1.94
NIPSNAP1-201ENST00000216121 SALL3Q9BXA9 1300 aa27.15■■□□□ 1.94
NIPSNAP1-201ENST00000216121 NECTIN2Q92692 538 aa27.15■■□□□ 1.94
NIPSNAP1-201ENST00000216121 EXOC6BQ9Y2D4 811 aa27.15■■□□□ 1.94
NIPSNAP1-201ENST00000216121 PTMSP20962 102 aa27.14■■□□□ 1.94
NIPSNAP1-201ENST00000216121 C14orf37Q86TY3 774 aa27.14■■□□□ 1.94
NIPSNAP1-201ENST00000216121 ERC2O15083 957 aa27.14■■□□□ 1.94
NIPSNAP1-201ENST00000216121 CEMIPQ8WUJ3 1361 aa27.14■■□□□ 1.93
NIPSNAP1-201ENST00000216121 LRRCC1Q9C099 1032 aa27.13■■□□□ 1.93
NIPSNAP1-201ENST00000216121 NFAT5O94916 1531 aa27.13■■□□□ 1.93
NIPSNAP1-201ENST00000216121 XRCC6P12956 609 aaKnown RBP eCLIP27.13■■□□□ 1.93
NIPSNAP1-201ENST00000216121 CLEC17AQ6ZS10 378 aa27.13■■□□□ 1.93
NIPSNAP1-201ENST00000216121 USHBP1Q8N6Y0 703 aa27.13■■□□□ 1.93
NIPSNAP1-201ENST00000216121 PNMA6EA0A0J9YXQ4 647 aa27.12■■□□□ 1.93
NIPSNAP1-201ENST00000216121 ANKLE2Q86XL3 938 aa27.12■■□□□ 1.93
NIPSNAP1-201ENST00000216121 IBTKQ9P2D0 1353 aaPredicted RBP27.12■■□□□ 1.93
NIPSNAP1-201ENST00000216121 TUBGCP6Q96RT7 1819 aa27.11■■□□□ 1.93
NIPSNAP1-201ENST00000216121 SKOR2Q2VWA4 1001 aaPredicted RBP27.11■■□□□ 1.93
NIPSNAP1-201ENST00000216121 USP44Q9H0E7 712 aa27.1■■□□□ 1.93
NIPSNAP1-201ENST00000216121 HDGFL1Q5TGJ6 251 aa27.1■■□□□ 1.93
NIPSNAP1-201ENST00000216121 NBPF6Q5VWK0 638 aa27.09■■□□□ 1.93
NIPSNAP1-201ENST00000216121 FAM43AQ8N2R8 423 aa27.09■■□□□ 1.93
NIPSNAP1-201ENST00000216121 NBPF4Q96M43 638 aa27.09■■□□□ 1.93
NIPSNAP1-201ENST00000216121 ISY1Q9ULR0 285 aaKnown RBP27.09■■□□□ 1.93
NIPSNAP1-201ENST00000216121 LRRFIP2Q9Y608 721 aaKnown RBP27.09■■□□□ 1.93
NIPSNAP1-201ENST00000216121 MED1Q15648 1581 aaPredicted RBP27.09■■□□□ 1.93
NIPSNAP1-201ENST00000216121 SSFA2P28290 1259 aa27.08■■□□□ 1.93
NIPSNAP1-201ENST00000216121 MX1P20591 662 aa27.08■■□□□ 1.92
NIPSNAP1-201ENST00000216121 ST18O60284 1047 aa27.07■■□□□ 1.92
NIPSNAP1-201ENST00000216121 KCNH5Q8NCM2 988 aa27.07■■□□□ 1.92
NIPSNAP1-201ENST00000216121 STAP2Q9UGK3 403 aa27.06■■□□□ 1.92
NIPSNAP1-201ENST00000216121 PHRF1Q9P1Y6 1649 aaKnown RBP27.06■■□□□ 1.92
NIPSNAP1-201ENST00000216121 PSME1Q06323 249 aa27.06■■□□□ 1.92
NIPSNAP1-201ENST00000216121 ADGRL3Q9HAR2 1447 aa27.06■■□□□ 1.92
NIPSNAP1-201ENST00000216121 HOXB7P09629 217 aa27.05■■□□□ 1.92
NIPSNAP1-201ENST00000216121 UBTFL1P0CB47 393 aaPredicted RBP27.05■■□□□ 1.92
NIPSNAP1-201ENST00000216121 MRE11P49959 708 aa27.05■■□□□ 1.92
NIPSNAP1-201ENST00000216121 SRCIN1Q9C0H9 1055 aa27.05■■□□□ 1.92
NIPSNAP1-201ENST00000216121 PHAXQ9H814 394 aaKnown RBP27.05■■□□□ 1.92
NIPSNAP1-201ENST00000216121 SETD1BQ9UPS6 1966 aaKnown RBP27.05■■□□□ 1.92
NIPSNAP1-201ENST00000216121 EIF4A1P60842 406 aaKnown RBP27.05■■□□□ 1.92
NIPSNAP1-201ENST00000216121 NUCB2P80303 420 aa27.04■■□□□ 1.92
NIPSNAP1-201ENST00000216121 SSH3Q8TE77 659 aa27.04■■□□□ 1.92
NIPSNAP1-201ENST00000216121 CHMP4AQ9BY43 222 aa27.04■■□□□ 1.92
NIPSNAP1-201ENST00000216121 ZNF142P52746 1687 aaPredicted RBP27.04■■□□□ 1.92
NIPSNAP1-201ENST00000216121 KDM3BQ7LBC6 1761 aa27.03■■□□□ 1.92
NIPSNAP1-201ENST00000216121 ESCO1Q5FWF5 840 aa27.03■■□□□ 1.92
NIPSNAP1-201ENST00000216121 TSHZ3Q63HK5 1081 aa27.03■■□□□ 1.92
NIPSNAP1-201ENST00000216121 LGR6Q9HBX8 967 aa27.03■■□□□ 1.92
NIPSNAP1-201ENST00000216121 CWC22Q9HCG8 908 aaKnown RBP27.03■■□□□ 1.92
NIPSNAP1-201ENST00000216121 RBM33Q96EV2 1170 aaKnown RBP27.02■■□□□ 1.92
NIPSNAP1-201ENST00000216121 ESYT1Q9BSJ8 1104 aa27.02■■□□□ 1.92
NIPSNAP1-201ENST00000216121 ARXQ96QS3 562 aa27.02■■□□□ 1.92
NIPSNAP1-201ENST00000216121 AOX1Q06278 1338 aa27.01■■□□□ 1.91
NIPSNAP1-201ENST00000216121 GOLGA6L22H0YM25 854 aa27.01■■□□□ 1.91
NIPSNAP1-201ENST00000216121 BAG4O95429 457 aaKnown RBP27.01■■□□□ 1.91
NIPSNAP1-201ENST00000216121 CYP2E1P05181 493 aaPredicted RBP27.01■■□□□ 1.91
NIPSNAP1-201ENST00000216121 AK9Q5TCS8 1911 aa27.01■■□□□ 1.91
NIPSNAP1-201ENST00000216121 LMO7Q8WWI1 1683 aa27.01■■□□□ 1.91
NIPSNAP1-201ENST00000216121 RGPD2P0DJD1 1756 aa27.01■■□□□ 1.91
NIPSNAP1-201ENST00000216121 AKAP4Q5JQC9 854 aa27■■□□□ 1.91
NIPSNAP1-201ENST00000216121 CHMLP26374 656 aa26.99■■□□□ 1.91
NIPSNAP1-201ENST00000216121 POLA2Q14181 598 aa26.99■■□□□ 1.91
NIPSNAP1-201ENST00000216121 PANK2Q9BZ23 570 aa26.99■■□□□ 1.91
NIPSNAP1-201ENST00000216121 GRPEL1Q9HAV7 217 aa26.99■■□□□ 1.91
NIPSNAP1-201ENST00000216121 RAB11FIP3O75154 756 aa26.98■■□□□ 1.91
NIPSNAP1-201ENST00000216121 EIF2S2P20042 333 aaKnown RBP26.98■■□□□ 1.91
NIPSNAP1-201ENST00000216121 PLEKHO1Q53GL0 409 aaPredicted RBP26.97■■□□□ 1.91
NIPSNAP1-201ENST00000216121 ZNF530Q6P9A1 599 aaPredicted RBP26.96■■□□□ 1.91
NIPSNAP1-201ENST00000216121 PPP1R42Q7Z4L9 355 aa26.96■■□□□ 1.91
NIPSNAP1-201ENST00000216121 CHPF2Q9P2E5 772 aa26.96■■□□□ 1.91
NIPSNAP1-201ENST00000216121 TRIM6-TRIM34B2RNG4 842 aa26.96■■□□□ 1.91
NIPSNAP1-201ENST00000216121 TEFQ10587 303 aa26.96■■□□□ 1.91
NIPSNAP1-201ENST00000216121 AMOTQ4VCS5 1084 aa26.96■■□□□ 1.91
NIPSNAP1-201ENST00000216121 LRRC59Q96AG4 307 aaKnown RBP26.96■■□□□ 1.91
NIPSNAP1-201ENST00000216121 NCAPD2Q15021 1401 aa26.95■■□□□ 1.91
NIPSNAP1-201ENST00000216121 KCNQ3O43525 872 aa26.95■■□□□ 1.9
NIPSNAP1-201ENST00000216121 BEND3Q5T5X7 828 aa26.95■■□□□ 1.9
NIPSNAP1-201ENST00000216121 DNAAF4Q8WXU2 420 aa26.95■■□□□ 1.9
NIPSNAP1-201ENST00000216121 RILPL2Q969X0 211 aa26.95■■□□□ 1.9
NIPSNAP1-201ENST00000216121 ARHGEF25Q86VW2 580 aa26.94■■□□□ 1.9
NIPSNAP1-201ENST00000216121 ZBTB7CA1YPR0 619 aa26.94■■□□□ 1.9
NIPSNAP1-201ENST00000216121 BTBD11A6QL63 1104 aa26.94■■□□□ 1.9
NIPSNAP1-201ENST00000216121 MCCP23508 829 aa26.94■■□□□ 1.9
NIPSNAP1-201ENST00000216121 ANAPC15P60006 121 aa26.94■■□□□ 1.9
NIPSNAP1-201ENST00000216121 GCP02774 474 aa26.93■■□□□ 1.9
NIPSNAP1-201ENST00000216121 KLHL40Q2TBA0 621 aa26.93■■□□□ 1.9
NIPSNAP1-201ENST00000216121 IL17RAQ96F46 866 aa26.93■■□□□ 1.9
NIPSNAP1-201ENST00000216121 SLIT3O75094 1523 aa26.93■■□□□ 1.9
NIPSNAP1-201ENST00000216121 PI4KAP2A4QPH2 592 aa26.93■■□□□ 1.9
NIPSNAP1-201ENST00000216121 SURF6O75683 361 aaKnown RBP26.93■■□□□ 1.9
NIPSNAP1-201ENST00000216121 MCM2P49736 904 aa26.93■■□□□ 1.9
NIPSNAP1-201ENST00000216121 ZGPATQ8N5A5 531 aaKnown RBP26.93■■□□□ 1.9
NIPSNAP1-201ENST00000216121 PI4KAP1Q8N8J0 262 aa26.93■■□□□ 1.9
NIPSNAP1-201ENST00000216121 IL1RAPL2Q9NP60 686 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms