RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 CCDC73Q6ZRK6 1079 aa13.77□□□□□ -0.21
DNMT3B-201ENST00000201963 MADDQ8WXG6 1647 aa13.77□□□□□ -0.21
DNMT3B-201ENST00000201963 IFIT2P09913 472 aaKnown RBP13.77□□□□□ -0.21
DNMT3B-201ENST00000201963 ZNF830Q96NB3 372 aaPredicted RBP13.77□□□□□ -0.21
DNMT3B-201ENST00000201963 HDAC5Q9UQL6 1122 aa13.77□□□□□ -0.21
DNMT3B-201ENST00000201963 KIDINS220Q9ULH0 1771 aa13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 ADGBQ8N7X0 1667 aa13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 ZKSCAN5Q9Y2L8 839 aa13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 ERICH4A6NGS2 130 aa13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 SMARCA5O60264 1052 aaPredicted RBP13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 SURF6O75683 361 aaKnown RBP13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 PRIM1P49642 420 aaKnown RBP13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 GAS2L2Q8NHY3 880 aa13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 MCM5P33992 734 aa13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 CGNQ9P2M7 1197 aaKnown RBP13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 DCTN1Q14203 1278 aa13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 DDB1Q16531 1140 aa13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 FMNL2Q96PY5 1086 aa13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 SDF4Q9BRK5 362 aa13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 MAP3K4Q9Y6R4 1608 aa13.76□□□□□ -0.21
DNMT3B-201ENST00000201963 ABCC11Q96J66 1382 aa13.75□□□□□ -0.21
DNMT3B-201ENST00000201963 RAB3GAP1Q15042 981 aa13.75□□□□□ -0.21
DNMT3B-201ENST00000201963 MIS18AQ9NYP9 233 aa13.75□□□□□ -0.21
DNMT3B-201ENST00000201963 TESK2Q96S53 571 aa13.75□□□□□ -0.21
DNMT3B-201ENST00000201963 CHMP4AQ9BY43 222 aa13.75□□□□□ -0.21
DNMT3B-201ENST00000201963 PLA2R1Q13018 1463 aa13.74□□□□□ -0.21
DNMT3B-201ENST00000201963 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
DNMT3B-201ENST00000201963 QTRT2Q9H974 415 aaKnown RBP13.74□□□□□ -0.21
DNMT3B-201ENST00000201963 C9orf78Q9NZ63 289 aaPredicted RBP13.74□□□□□ -0.21
DNMT3B-201ENST00000201963 WWC3Q9ULE0 1092 aa13.74□□□□□ -0.21
DNMT3B-201ENST00000201963 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
DNMT3B-201ENST00000201963 CEBPZQ03701 1054 aaKnown RBP13.74□□□□□ -0.21
DNMT3B-201ENST00000201963 FILIP1Q7Z7B0 1213 aa13.74□□□□□ -0.21
DNMT3B-201ENST00000201963 UBTFL1P0CB47 393 aaPredicted RBP13.73□□□□□ -0.21
DNMT3B-201ENST00000201963 SMC5Q8IY18 1101 aa13.73□□□□□ -0.21
DNMT3B-201ENST00000201963 SNX21Q969T3 373 aa13.73□□□□□ -0.21
DNMT3B-201ENST00000201963 TNMDQ9H2S6 317 aa13.73□□□□□ -0.21
DNMT3B-201ENST00000201963 EXOC6BQ9Y2D4 811 aa13.73□□□□□ -0.21
DNMT3B-201ENST00000201963 ARHGAP31Q2M1Z3 1444 aa13.73□□□□□ -0.21
DNMT3B-201ENST00000201963 MAP4K4O95819 1239 aaPredicted RBP13.73□□□□□ -0.21
DNMT3B-201ENST00000201963 HDAC1Q13547 482 aaPredicted RBP13.73□□□□□ -0.21
DNMT3B-201ENST00000201963 CAMSAP1Q5T5Y3 1602 aa13.73□□□□□ -0.21
DNMT3B-201ENST00000201963 ADCY5O95622 1261 aa13.72□□□□□ -0.21
DNMT3B-201ENST00000201963 LRSAM1Q6UWE0 723 aa13.72□□□□□ -0.21
DNMT3B-201ENST00000201963 RALGAPBQ86X10 1494 aa13.72□□□□□ -0.21
DNMT3B-201ENST00000201963 TULP1O00294 542 aaPredicted RBP13.72□□□□□ -0.21
DNMT3B-201ENST00000201963 GNAI3P08754 354 aa13.72□□□□□ -0.21
DNMT3B-201ENST00000201963 FERMT3Q86UX7 667 aa13.72□□□□□ -0.21
DNMT3B-201ENST00000201963 TMX4Q9H1E5 349 aaPredicted RBP13.72□□□□□ -0.21
DNMT3B-201ENST00000201963 SETD1BQ9UPS6 1966 aaKnown RBP13.72□□□□□ -0.21
DNMT3B-201ENST00000201963 IGSF3O75054 1194 aa13.72□□□□□ -0.21
DNMT3B-201ENST00000201963 HCLS1P14317 486 aaPredicted RBP13.72□□□□□ -0.21
DNMT3B-201ENST00000201963 KRT85P78386 507 aa13.72□□□□□ -0.21
DNMT3B-201ENST00000201963 BICDL1Q6ZP65 573 aa13.72□□□□□ -0.21
DNMT3B-201ENST00000201963 GNAI2P04899 355 aa13.71□□□□□ -0.21
DNMT3B-201ENST00000201963 PDCP20941 246 aa13.71□□□□□ -0.21
DNMT3B-201ENST00000201963 MCM10Q7L590 875 aa13.71□□□□□ -0.21
DNMT3B-201ENST00000201963 TTC12Q9H892 705 aaPredicted RBP13.71□□□□□ -0.21
DNMT3B-201ENST00000201963 NUCB1Q02818 461 aa13.71□□□□□ -0.21
DNMT3B-201ENST00000201963 RPAP2Q8IXW5 612 aaPredicted RBP13.71□□□□□ -0.21
DNMT3B-201ENST00000201963 CNTROBQ8N137 903 aa13.71□□□□□ -0.21
DNMT3B-201ENST00000201963 TMOD3Q9NYL9 352 aa13.71□□□□□ -0.21
DNMT3B-201ENST00000201963 TAF7LQ5H9L4 462 aa13.71□□□□□ -0.22
DNMT3B-201ENST00000201963 C16orf45Q96MC5 204 aaPredicted RBP13.71□□□□□ -0.22
DNMT3B-201ENST00000201963 LRRCC1Q9C099 1032 aa13.71□□□□□ -0.22
DNMT3B-201ENST00000201963 IL1RAPL2Q9NP60 686 aa13.71□□□□□ -0.22
DNMT3B-201ENST00000201963 CEP152O94986 1710 aa13.71□□□□□ -0.22
DNMT3B-201ENST00000201963 CAMK4Q16566 473 aa13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 LARP1BQ659C4 914 aaKnown RBP13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 CCDC183Q5T5S1 534 aa13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 NUP62CLQ9H1M0 184 aa13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 PLXNC1O60486 1568 aa13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 KINO60870 393 aaKnown RBP13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 AEBP1Q8IUX7 1158 aa13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 CCDC34Q96HJ3 373 aa13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 TRERF1Q96PN7 1200 aa13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 TTC21AQ8NDW8 1320 aa13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 KDM5CP41229 1560 aa13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 SMC2O95347 1197 aa13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 CARD14Q9BXL6 1004 aa13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 MAP3K19Q56UN5 1328 aa13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 A0A1W2PP64 1363 aa13.7□□□□□ -0.22
DNMT3B-201ENST00000201963 NOLC1Q14978 699 aaKnown RBP eCLIP13.69□□□□□ -0.22
DNMT3B-201ENST00000201963 PRIMPOLQ96LW4 560 aa13.69□□□□□ -0.22
DNMT3B-201ENST00000201963 LARP6Q9BRS8 491 aaKnown RBP13.69□□□□□ -0.22
DNMT3B-201ENST00000201963 PRR36Q9H6K5 1346 aa13.69□□□□□ -0.22
DNMT3B-201ENST00000201963 PES1O00541 588 aaKnown RBP13.69□□□□□ -0.22
DNMT3B-201ENST00000201963 MYL6BP14649 208 aa13.69□□□□□ -0.22
DNMT3B-201ENST00000201963 CLASRPQ8N2M8 674 aaKnown RBP13.69□□□□□ -0.22
DNMT3B-201ENST00000201963 STK3Q13188 491 aa13.68□□□□□ -0.22
DNMT3B-201ENST00000201963 INO80Q9ULG1 1556 aaPredicted RBP13.68□□□□□ -0.22
DNMT3B-201ENST00000201963 G3V3G9 751 aa13.68□□□□□ -0.22
DNMT3B-201ENST00000201963 ALDH1L2Q3SY69 923 aa13.68□□□□□ -0.22
DNMT3B-201ENST00000201963 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
DNMT3B-201ENST00000201963 AGLP35573 1532 aa13.68□□□□□ -0.22
DNMT3B-201ENST00000201963 RBSNQ9H1K0 784 aa13.68□□□□□ -0.22
DNMT3B-201ENST00000201963 CYP46A1Q9Y6A2 500 aa13.68□□□□□ -0.22
DNMT3B-201ENST00000201963 TRPM2O94759 1503 aa13.68□□□□□ -0.22
DNMT3B-201ENST00000201963 PTPRTO14522 1441 aa13.68□□□□□ -0.22
DNMT3B-201ENST00000201963 SPATA31E1Q6ZUB1 1445 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms