RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 PLEKHO1Q53GL0 409 aaPredicted RBP22.49■■□□□ 1.19
SLC22A4-201ENST00000200652 AKAP4Q5JQC9 854 aa22.49■■□□□ 1.19
SLC22A4-201ENST00000200652 TTC22Q5TAA0 569 aa22.49■■□□□ 1.19
SLC22A4-201ENST00000200652 N4BP2Q86UW6 1770 aaPredicted RBP22.49■■□□□ 1.19
SLC22A4-201ENST00000200652 HDGFL1Q5TGJ6 251 aa22.49■■□□□ 1.19
SLC22A4-201ENST00000200652 ZNF530Q6P9A1 599 aaPredicted RBP22.49■■□□□ 1.19
SLC22A4-201ENST00000200652 SMARCA5O60264 1052 aaPredicted RBP22.48■■□□□ 1.19
SLC22A4-201ENST00000200652 CDC45O75419 566 aa22.48■■□□□ 1.19
SLC22A4-201ENST00000200652 EIF4A1P60842 406 aaKnown RBP22.48■■□□□ 1.19
SLC22A4-201ENST00000200652 OTUD7AQ8TE49 926 aaPredicted RBP22.48■■□□□ 1.19
SLC22A4-201ENST00000200652 ANKRD24Q8TF21 1146 aa22.48■■□□□ 1.19
SLC22A4-201ENST00000200652 BCL11AQ9H165 835 aa22.48■■□□□ 1.19
SLC22A4-201ENST00000200652 AMOTQ4VCS5 1084 aa22.47■■□□□ 1.19
SLC22A4-201ENST00000200652 APBB1O00213 710 aa22.46■■□□□ 1.19
SLC22A4-201ENST00000200652 AXIN2Q9Y2T1 843 aa22.46■■□□□ 1.19
SLC22A4-201ENST00000200652 GNAI3P08754 354 aa22.46■■□□□ 1.19
SLC22A4-201ENST00000200652 PXDNLA1KZ92 1463 aa22.45■■□□□ 1.18
SLC22A4-201ENST00000200652 MST1RQ04912 1400 aa22.45■■□□□ 1.18
SLC22A4-201ENST00000200652 CAMTA1Q9Y6Y1 1673 aa22.45■■□□□ 1.18
SLC22A4-201ENST00000200652 MPRIPQ6WCQ1 1025 aa22.45■■□□□ 1.18
SLC22A4-201ENST00000200652 PHAXQ9H814 394 aaKnown RBP22.45■■□□□ 1.18
SLC22A4-201ENST00000200652 ALS2Q96Q42 1657 aa22.44■■□□□ 1.18
SLC22A4-201ENST00000200652 RGPD5Q99666 1765 aa22.44■■□□□ 1.18
SLC22A4-201ENST00000200652 KCNQ3O43525 872 aa22.44■■□□□ 1.18
SLC22A4-201ENST00000200652 TEFQ10587 303 aa22.44■■□□□ 1.18
SLC22A4-201ENST00000200652 PXDNQ92626 1479 aa22.44■■□□□ 1.18
SLC22A4-201ENST00000200652 HOXB7P09629 217 aa22.43■■□□□ 1.18
SLC22A4-201ENST00000200652 EIF2S2P20042 333 aaKnown RBP22.43■■□□□ 1.18
SLC22A4-201ENST00000200652 SPRYD3Q8NCJ5 442 aa22.43■■□□□ 1.18
SLC22A4-201ENST00000200652 KIF2CQ99661 725 aa22.43■■□□□ 1.18
SLC22A4-201ENST00000200652 BTBD11A6QL63 1104 aa22.42■■□□□ 1.18
SLC22A4-201ENST00000200652 RNMTO43148 476 aaKnown RBP22.42■■□□□ 1.18
SLC22A4-201ENST00000200652 HSCBQ8IWL3 235 aa22.42■■□□□ 1.18
SLC22A4-201ENST00000200652 SNX21Q969T3 373 aa22.42■■□□□ 1.18
SLC22A4-201ENST00000200652 C1orf141Q5JVX7 400 aa22.42■■□□□ 1.18
SLC22A4-201ENST00000200652 STRCP1A6NGW2 1772 aa22.42■■□□□ 1.18
SLC22A4-201ENST00000200652 ATP8B2P98198 1209 aa22.41■■□□□ 1.18
SLC22A4-201ENST00000200652 ATF3P18847 181 aa22.41■■□□□ 1.18
SLC22A4-201ENST00000200652 USP44Q9H0E7 712 aa22.41■■□□□ 1.18
SLC22A4-201ENST00000200652 TMEM94Q12767 1356 aa22.4■■□□□ 1.18
SLC22A4-201ENST00000200652 PNMA6EA0A0J9YXQ4 647 aa22.39■■□□□ 1.18
SLC22A4-201ENST00000200652 OVOS2A0A0G2JMS6 1433 aa22.39■■□□□ 1.17
SLC22A4-201ENST00000200652 SDSP20132 328 aa22.39■■□□□ 1.17
SLC22A4-201ENST00000200652 ZC3H6P61129 1189 aaKnown RBP22.39■■□□□ 1.17
SLC22A4-201ENST00000200652 CHMP4AQ9BY43 222 aa22.39■■□□□ 1.17
SLC22A4-201ENST00000200652 CHPF2Q9P2E5 772 aa22.39■■□□□ 1.17
SLC22A4-201ENST00000200652 EXOC6BQ9Y2D4 811 aa22.39■■□□□ 1.17
SLC22A4-201ENST00000200652 LRRFIP2Q9Y608 721 aaKnown RBP22.39■■□□□ 1.17
SLC22A4-201ENST00000200652 EIF5BO60841 1220 aaKnown RBP22.38■■□□□ 1.17
SLC22A4-201ENST00000200652 GSE1Q14687 1217 aa22.38■■□□□ 1.17
SLC22A4-201ENST00000200652 OSBPL3Q9H4L5 887 aa22.38■■□□□ 1.17
SLC22A4-201ENST00000200652 ERBB3P21860 1342 aa22.38■■□□□ 1.17
SLC22A4-201ENST00000200652 DDX17Q92841 729 aaKnown RBP22.37■■□□□ 1.17
SLC22A4-201ENST00000200652 UBTFL1P0CB47 393 aaPredicted RBP22.36■■□□□ 1.17
SLC22A4-201ENST00000200652 DCCP43146 1447 aa22.36■■□□□ 1.17
SLC22A4-201ENST00000200652 PDE1AP54750 535 aa22.35■■□□□ 1.17
SLC22A4-201ENST00000200652 SRCIN1Q9C0H9 1055 aa22.35■■□□□ 1.17
SLC22A4-201ENST00000200652 SIPA1L3O60292 1781 aaPredicted RBP22.35■■□□□ 1.17
SLC22A4-201ENST00000200652 NCOA3Q9Y6Q9 1424 aa22.35■■□□□ 1.17
SLC22A4-201ENST00000200652 LRRCC1Q9C099 1032 aa22.35■■□□□ 1.17
SLC22A4-201ENST00000200652 CHMP5Q9NZZ3 219 aa22.34■■□□□ 1.17
SLC22A4-201ENST00000200652 IBTKQ9P2D0 1353 aaPredicted RBP22.34■■□□□ 1.17
SLC22A4-201ENST00000200652 SALL3Q9BXA9 1300 aa22.34■■□□□ 1.17
SLC22A4-201ENST00000200652 ADAMTS7Q9UKP4 1686 aa22.33■■□□□ 1.17
SLC22A4-201ENST00000200652 HEG1Q9ULI3 1381 aa22.33■■□□□ 1.16
SLC22A4-201ENST00000200652 PI4KAP2A4QPH2 592 aa22.33■■□□□ 1.16
SLC22A4-201ENST00000200652 ANXA1P04083 346 aa22.33■■□□□ 1.16
SLC22A4-201ENST00000200652 PI4KAP1Q8N8J0 262 aa22.33■■□□□ 1.16
SLC22A4-201ENST00000200652 DNAAF4Q8WXU2 420 aa22.33■■□□□ 1.16
SLC22A4-201ENST00000200652 DNAJC5Q9H3Z4 198 aa22.33■■□□□ 1.16
SLC22A4-201ENST00000200652 LMTK3Q96Q04 1460 aa22.32■■□□□ 1.16
SLC22A4-201ENST00000200652 GIGYF1O75420 1035 aaPredicted RBP22.32■■□□□ 1.16
SLC22A4-201ENST00000200652 BEND3Q5T5X7 828 aa22.32■■□□□ 1.16
SLC22A4-201ENST00000200652 RBM42Q9BTD8 480 aaKnown RBP22.32■■□□□ 1.16
SLC22A4-201ENST00000200652 USP26Q9BXU7 913 aa22.32■■□□□ 1.16
SLC22A4-201ENST00000200652 CASC1Q6TDU7 716 aa22.31■■□□□ 1.16
SLC22A4-201ENST00000200652 SSH3Q8TE77 659 aa22.31■■□□□ 1.16
SLC22A4-201ENST00000200652 COL18A1P39060 1754 aa22.31■■□□□ 1.16
SLC22A4-201ENST00000200652 CD2BP2O95400 341 aaKnown RBP22.31■■□□□ 1.16
SLC22A4-201ENST00000200652 DBF4Q9UBU7 674 aaPredicted RBP22.31■■□□□ 1.16
SLC22A4-201ENST00000200652 DDIT3P35638 169 aa22.3■■□□□ 1.16
SLC22A4-201ENST00000200652 CADPS2Q86UW7 1296 aa22.3■■□□□ 1.16
SLC22A4-201ENST00000200652 ADCY9O60503 1353 aa22.3■■□□□ 1.16
SLC22A4-201ENST00000200652 CRYBG1Q9Y4K1 1723 aa22.3■■□□□ 1.16
SLC22A4-201ENST00000200652 TUBGCP6Q96RT7 1819 aa22.29■■□□□ 1.16
SLC22A4-201ENST00000200652 NLRP2Q9NX02 1062 aa22.29■■□□□ 1.16
SLC22A4-201ENST00000200652 NPHP3Q7Z494 1330 aa22.29■■□□□ 1.16
SLC22A4-201ENST00000200652 HSP90AB1P08238 724 aaKnown RBP22.29■■□□□ 1.16
SLC22A4-201ENST00000200652 NBPF7P0C2Y1 421 aaPredicted RBP22.29■■□□□ 1.16
SLC22A4-201ENST00000200652 RAPGEF4Q8WZA2 1011 aa22.29■■□□□ 1.16
SLC22A4-201ENST00000200652 MX1P20591 662 aa22.28■■□□□ 1.16
SLC22A4-201ENST00000200652 POLA2Q14181 598 aa22.28■■□□□ 1.16
SLC22A4-201ENST00000200652 PPP1R42Q7Z4L9 355 aa22.28■■□□□ 1.16
SLC22A4-201ENST00000200652 PRAMEF22A3QJZ6 481 aa22.27■■□□□ 1.16
SLC22A4-201ENST00000200652 CABLES1Q8TDN4 633 aa22.27■■□□□ 1.16
SLC22A4-201ENST00000200652 TSHZ3Q63HK5 1081 aa22.27■■□□□ 1.16
SLC22A4-201ENST00000200652 TNS3Q68CZ2 1445 aa22.27■■□□□ 1.16
SLC22A4-201ENST00000200652 K7ELQ4 463 aaPredicted RBP22.26■■□□□ 1.15
SLC22A4-201ENST00000200652 PROSER3Q2NL68 480 aa22.26■■□□□ 1.15
SLC22A4-201ENST00000200652 SCN11AQ9UI33 1791 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms