RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 PNMA6EA0A0J9YXQ4 647 aa24.2■■□□□ 1.46
PPP1R3F-201ENST00000055335 CCDC183Q5T5S1 534 aa24.2■■□□□ 1.46
PPP1R3F-201ENST00000055335 IL25Q9H293 177 aa24.2■■□□□ 1.46
PPP1R3F-201ENST00000055335 FOXO3O43524 673 aa24.2■■□□□ 1.46
PPP1R3F-201ENST00000055335 GNAI2P04899 355 aa24.2■■□□□ 1.46
PPP1R3F-201ENST00000055335 CHAF1AQ13111 956 aaPredicted RBP24.2■■□□□ 1.46
PPP1R3F-201ENST00000055335 ATP2B3Q16720 1220 aa24.2■■□□□ 1.46
PPP1R3F-201ENST00000055335 TSPYL4Q9UJ04 414 aa24.19■■□□□ 1.46
PPP1R3F-201ENST00000055335 IFT172Q9UG01 1749 aa24.19■■□□□ 1.46
PPP1R3F-201ENST00000055335 CUL4AQ13619 759 aa24.19■■□□□ 1.46
PPP1R3F-201ENST00000055335 BCL2L12Q9HB09 334 aa24.19■■□□□ 1.46
PPP1R3F-201ENST00000055335 CD163L1Q9NR16 1453 aa24.19■■□□□ 1.46
PPP1R3F-201ENST00000055335 CAMSAP1Q5T5Y3 1602 aa24.18■■□□□ 1.46
PPP1R3F-201ENST00000055335 INO80Q9ULG1 1556 aaPredicted RBP24.18■■□□□ 1.46
PPP1R3F-201ENST00000055335 VPS37CA5D8V6 355 aaPredicted RBP24.18■■□□□ 1.46
PPP1R3F-201ENST00000055335 DRC7Q8IY82 874 aa24.17■■□□□ 1.46
PPP1R3F-201ENST00000055335 PRIMPOLQ96LW4 560 aa24.17■■□□□ 1.46
PPP1R3F-201ENST00000055335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.17■■□□□ 1.46
PPP1R3F-201ENST00000055335 HAP1P54257 671 aaPredicted RBP24.17■■□□□ 1.46
PPP1R3F-201ENST00000055335 FAM184AQ8NB25 1140 aa24.17■■□□□ 1.46
PPP1R3F-201ENST00000055335 ZFYVE9O95405 1425 aa24.17■■□□□ 1.46
PPP1R3F-201ENST00000055335 PDCL2Q8N4E4 241 aa24.17■■□□□ 1.46
PPP1R3F-201ENST00000055335 ZC3H13Q5T200 1668 aaKnown RBP24.17■■□□□ 1.46
PPP1R3F-201ENST00000055335 CAMK4Q16566 473 aa24.16■■□□□ 1.46
PPP1R3F-201ENST00000055335 PYCARDQ9ULZ3 195 aa24.16■■□□□ 1.46
PPP1R3F-201ENST00000055335 SMC3Q9UQE7 1217 aa24.16■■□□□ 1.46
PPP1R3F-201ENST00000055335 U2AF2P26368 475 aaKnown RBP eCLIP24.16■■□□□ 1.46
PPP1R3F-201ENST00000055335 ZSCAN20P17040 1043 aaPredicted RBP24.15■■□□□ 1.46
PPP1R3F-201ENST00000055335 TXNDC2Q86VQ3 553 aa24.15■■□□□ 1.46
PPP1R3F-201ENST00000055335 RTF1Q92541 710 aaKnown RBP24.15■■□□□ 1.46
PPP1R3F-201ENST00000055335 INTS4Q96HW7 963 aaKnown RBP24.15■■□□□ 1.46
PPP1R3F-201ENST00000055335 STK31Q9BXU1 1019 aa24.15■■□□□ 1.46
PPP1R3F-201ENST00000055335 SPG7Q9UQ90 795 aa24.15■■□□□ 1.46
PPP1R3F-201ENST00000055335 ARHGAP31Q2M1Z3 1444 aa24.14■■□□□ 1.46
PPP1R3F-201ENST00000055335 KDM4AO75164 1064 aa24.14■■□□□ 1.46
PPP1R3F-201ENST00000055335 PPLO60437 1756 aa24.14■■□□□ 1.45
PPP1R3F-201ENST00000055335 RIOK3O14730 519 aaKnown RBP24.14■■□□□ 1.45
PPP1R3F-201ENST00000055335 DNM1Q05193 864 aaKnown RBP24.14■■□□□ 1.45
PPP1R3F-201ENST00000055335 LRRFIP2Q9Y608 721 aaKnown RBP24.14■■□□□ 1.45
PPP1R3F-201ENST00000055335 NEURL4Q96JN8 1562 aa24.14■■□□□ 1.45
PPP1R3F-201ENST00000055335 SYT1P21579 422 aa24.13■■□□□ 1.45
PPP1R3F-201ENST00000055335 CHL1O00533 1208 aa24.13■■□□□ 1.45
PPP1R3F-201ENST00000055335 STX6O43752 255 aa24.13■■□□□ 1.45
PPP1R3F-201ENST00000055335 FERMT3Q86UX7 667 aa24.13■■□□□ 1.45
PPP1R3F-201ENST00000055335 CCDC83Q8IWF9 413 aa24.13■■□□□ 1.45
PPP1R3F-201ENST00000055335 CWC27Q6UX04 472 aaKnown RBP24.13■■□□□ 1.45
PPP1R3F-201ENST00000055335 KNDC1Q76NI1 1749 aa24.13■■□□□ 1.45
PPP1R3F-201ENST00000055335 HSP90AB2PQ58FF8 381 aa24.12■■□□□ 1.45
PPP1R3F-201ENST00000055335 PTPRCP08575 1304 aa24.12■■□□□ 1.45
PPP1R3F-201ENST00000055335 PLEKHG5O94827 1062 aa24.12■■□□□ 1.45
PPP1R3F-201ENST00000055335 ZSCAN22P10073 491 aaPredicted RBP24.12■■□□□ 1.45
PPP1R3F-201ENST00000055335 DMTNQ08495 405 aa24.12■■□□□ 1.45
PPP1R3F-201ENST00000055335 EIF4A2Q14240 407 aaKnown RBP24.12■■□□□ 1.45
PPP1R3F-201ENST00000055335 ABCC3O15438 1527 aa24.12■■□□□ 1.45
PPP1R3F-201ENST00000055335 ARHGEF28Q8N1W1 1705 aaKnown RBP24.11■■□□□ 1.45
PPP1R3F-201ENST00000055335 AK2P54819 239 aa24.11■■□□□ 1.45
PPP1R3F-201ENST00000055335 UVSSAQ2YD98 709 aa24.11■■□□□ 1.45
PPP1R3F-201ENST00000055335 SLC52A1Q9NWF4 448 aa24.11■■□□□ 1.45
PPP1R3F-201ENST00000055335 SURF6O75683 361 aaKnown RBP24.1■■□□□ 1.45
PPP1R3F-201ENST00000055335 AP5Z1O43299 807 aa24.1■■□□□ 1.45
PPP1R3F-201ENST00000055335 CCT4P50991 539 aaKnown RBP24.1■■□□□ 1.45
PPP1R3F-201ENST00000055335 FAM173BQ6P4H8 233 aa24.1■■□□□ 1.45
PPP1R3F-201ENST00000055335 UBE2HP62256 183 aa24.1■■□□□ 1.45
PPP1R3F-201ENST00000055335 OSBPL3Q9H4L5 887 aa24.1■■□□□ 1.45
PPP1R3F-201ENST00000055335 POGZQ7Z3K3 1410 aa24.09■■□□□ 1.45
PPP1R3F-201ENST00000055335 C16orf45Q96MC5 204 aaPredicted RBP24.09■■□□□ 1.45
PPP1R3F-201ENST00000055335 ARHGEF40Q8TER5 1519 aa24.09■■□□□ 1.45
PPP1R3F-201ENST00000055335 CASTP20810 708 aaKnown RBP24.09■■□□□ 1.45
PPP1R3F-201ENST00000055335 CKAP2LQ8IYA6 745 aa24.09■■□□□ 1.45
PPP1R3F-201ENST00000055335 ZNF592Q92610 1267 aa24.09■■□□□ 1.45
PPP1R3F-201ENST00000055335 RASEFQ8IZ41 740 aa24.08■■□□□ 1.45
PPP1R3F-201ENST00000055335 ASXL2Q76L83 1435 aa24.08■■□□□ 1.45
PPP1R3F-201ENST00000055335 PTGS1P23219 599 aa24.08■■□□□ 1.45
PPP1R3F-201ENST00000055335 ANAPC15P60006 121 aa24.08■■□□□ 1.45
PPP1R3F-201ENST00000055335 NUDT16Q96DE0 195 aaKnown RBP24.08■■□□□ 1.45
PPP1R3F-201ENST00000055335 DIAPH3Q9NSV4 1193 aa24.07■■□□□ 1.44
PPP1R3F-201ENST00000055335 KIF24Q5T7B8 1368 aa24.07■■□□□ 1.44
PPP1R3F-201ENST00000055335 RGS12O14924 1447 aa24.06■■□□□ 1.44
PPP1R3F-201ENST00000055335 KCNF1Q9H3M0 494 aa24.06■■□□□ 1.44
PPP1R3F-201ENST00000055335 F13A1P00488 732 aa24.06■■□□□ 1.44
PPP1R3F-201ENST00000055335 MLECQ14165 292 aa24.06■■□□□ 1.44
PPP1R3F-201ENST00000055335 NECAB1Q8N987 351 aa24.06■■□□□ 1.44
PPP1R3F-201ENST00000055335 LARGE1O95461 756 aa24.06■■□□□ 1.44
PPP1R3F-201ENST00000055335 GJB2P29033 226 aa24.06■■□□□ 1.44
PPP1R3F-201ENST00000055335 OS9Q13438 667 aaPredicted RBP24.06■■□□□ 1.44
PPP1R3F-201ENST00000055335 TCHHQ07283 1943 aa24.05■■□□□ 1.44
PPP1R3F-201ENST00000055335 KIDINS220Q9ULH0 1771 aa24.05■■□□□ 1.44
PPP1R3F-201ENST00000055335 PTPRMP28827 1452 aa24.05■■□□□ 1.44
PPP1R3F-201ENST00000055335 LUZP1Q86V48 1076 aa24.05■■□□□ 1.44
PPP1R3F-201ENST00000055335 KCNJ4P48050 445 aa24.04■■□□□ 1.44
PPP1R3F-201ENST00000055335 LRMPQ12912 555 aa24.04■■□□□ 1.44
PPP1R3F-201ENST00000055335 FLIIQ13045 1269 aa24.04■■□□□ 1.44
PPP1R3F-201ENST00000055335 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.04■■□□□ 1.44
PPP1R3F-201ENST00000055335 SNX14Q9Y5W7 946 aa24.04■■□□□ 1.44
PPP1R3F-201ENST00000055335 UHRF1BP1LA0JNW5 1464 aa24.04■■□□□ 1.44
PPP1R3F-201ENST00000055335 RUFY3Q7L099 469 aa24.04■■□□□ 1.44
PPP1R3F-201ENST00000055335 ZNF771Q7L3S4 317 aaPredicted RBP24.04■■□□□ 1.44
PPP1R3F-201ENST00000055335 KIAA1524Q8TCG1 905 aa24.04■■□□□ 1.44
PPP1R3F-201ENST00000055335 LIMCH1Q9UPQ0 1083 aa24.04■■□□□ 1.44
PPP1R3F-201ENST00000055335 GOLGA6L4A6NEF3 574 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms