RNA–Protein interactions for RNA: ENSMUST00000228550.1

Pkd1-207, Transcript of Polycystin-1, mousemouse

BASIC

Gene Pkd1, Length 1,050 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1-207ENSMUST00000228550 Spata31d1bE9QA57 1361 aa30.18■■■□□ 2.42
Pkd1-207ENSMUST00000228550 Col23a1Q8K4G2 532 aa30.18■■■□□ 2.42
Pkd1-207ENSMUST00000228550 Nav1Q8CH77 1875 aa30.18■■■□□ 2.42
Pkd1-207ENSMUST00000228550 Zswim8Q3UHH1 1832 aaKnown RBP30.17■■■□□ 2.42
Pkd1-207ENSMUST00000228550 Btbd11Q6GQW0 1109 aa30.15■■■□□ 2.42
Pkd1-207ENSMUST00000228550 Ppm1fQ8CGA0 452 aa30.15■■■□□ 2.42
Pkd1-207ENSMUST00000228550 RtcbQ99LF4 505 aaKnown RBP30.15■■■□□ 2.42
Pkd1-207ENSMUST00000228550 Col11a2Q64739 1736 aa30.15■■■□□ 2.42
Pkd1-207ENSMUST00000228550 Adcy9P51830 1353 aa30.15■■■□□ 2.42
Pkd1-207ENSMUST00000228550 Sned1Q70E20 1403 aa30.13■■■□□ 2.41
Pkd1-207ENSMUST00000228550 DiexfQ8BTT6 772 aaKnown RBP30.13■■■□□ 2.41
Pkd1-207ENSMUST00000228550 Kcna3P16390 528 aa30.12■■■□□ 2.41
Pkd1-207ENSMUST00000228550 Hirip3Q8BLH7 601 aa30.12■■■□□ 2.41
Pkd1-207ENSMUST00000228550 Lrrc43Q3V0L5 667 aa30.1■■■□□ 2.41
Pkd1-207ENSMUST00000228550 Prom2Q3UUY6 835 aa30.09■■■□□ 2.41
Pkd1-207ENSMUST00000228550 Egfem1Q8C088 590 aa30.09■■■□□ 2.41
Pkd1-207ENSMUST00000228550 Golga2Q921M4 999 aa30.09■■■□□ 2.41
Pkd1-207ENSMUST00000228550 Plch1Q4KWH5 1682 aa30.08■■■□□ 2.41
Pkd1-207ENSMUST00000228550 Lrp5Q91VN0 1614 aa30.08■■■□□ 2.41
Pkd1-207ENSMUST00000228550 Znf541Q0GGX2 1363 aa30.08■■■□□ 2.41
Pkd1-207ENSMUST00000228550 Cavin4A2AMM0 362 aa30.07■■■□□ 2.4
Pkd1-207ENSMUST00000228550 Irx6Q9ER75 438 aa30.07■■■□□ 2.4
Pkd1-207ENSMUST00000228550 PigbQ9JJQ0 542 aa30.07■■■□□ 2.4
Pkd1-207ENSMUST00000228550 Syde2E9PUP1 1314 aa30.06■■■□□ 2.4
Pkd1-207ENSMUST00000228550 Map4k4P97820 1233 aaKnown RBP30.05■■■□□ 2.4
Pkd1-207ENSMUST00000228550 Zfyve9A2A8R0 1397 aa30.04■■■□□ 2.4
Pkd1-207ENSMUST00000228550 Usp19Q3UJD6 1360 aa30.04■■■□□ 2.4
Pkd1-207ENSMUST00000228550 Rad23bP54728 416 aa30.04■■■□□ 2.4
Pkd1-207ENSMUST00000228550 Zscan21Q07231 555 aa30.04■■■□□ 2.4
Pkd1-207ENSMUST00000228550 Ggnbp2Q5SV77 696 aa30.04■■■□□ 2.4
Pkd1-207ENSMUST00000228550 Clcn1Q64347 994 aa30.04■■■□□ 2.4
Pkd1-207ENSMUST00000228550 Prim1P20664 417 aa30.03■■■□□ 2.4
Pkd1-207ENSMUST00000228550 Magea6O89010 325 aa30.02■■■□□ 2.4
Pkd1-207ENSMUST00000228550 Magea3Q6T340 320 aa30.02■■■□□ 2.4
Pkd1-207ENSMUST00000228550 Swt1Q9DBQ9 907 aa30.02■■■□□ 2.4
Pkd1-207ENSMUST00000228550 Znrd1-asQ8R0E5 213 aa30.01■■■□□ 2.39
Pkd1-207ENSMUST00000228550 HmcesQ8R1M0 353 aaKnown RBP30.01■■■□□ 2.39
Pkd1-207ENSMUST00000228550 Mylk2Q8VCR8 613 aa30.01■■■□□ 2.39
Pkd1-207ENSMUST00000228550 Amhr2Q8K592 568 aa30■■■□□ 2.39
Pkd1-207ENSMUST00000228550 TefQ9JLC6 301 aa30■■■□□ 2.39
Pkd1-207ENSMUST00000228550 Esx1O88933 382 aa29.99■■■□□ 2.39
Pkd1-207ENSMUST00000228550 Zbtb1Q91VL9 713 aa29.99■■■□□ 2.39
Pkd1-207ENSMUST00000228550 Usp21Q9QZL6 566 aa29.99■■■□□ 2.39
Pkd1-207ENSMUST00000228550 MetP16056 1379 aa29.99■■■□□ 2.39
Pkd1-207ENSMUST00000228550 Cnnm1Q0GA42 951 aa29.98■■■□□ 2.39
Pkd1-207ENSMUST00000228550 Slfnl1Q8BHW9 410 aa29.98■■■□□ 2.39
Pkd1-207ENSMUST00000228550 Flad1Q8R123 492 aa29.98■■■□□ 2.39
Pkd1-207ENSMUST00000228550 CpzQ8R4V4 654 aa29.98■■■□□ 2.39
Pkd1-207ENSMUST00000228550 Nip7Q9CXK8 180 aaKnown RBP29.97■■■□□ 2.39
Pkd1-207ENSMUST00000228550 Tlr8P58682 1032 aa29.96■■■□□ 2.39
Pkd1-207ENSMUST00000228550 Atp1b3P97370 278 aa29.94■■■□□ 2.38
Pkd1-207ENSMUST00000228550 Dusp27Q148W8 1138 aa29.94■■■□□ 2.38
Pkd1-207ENSMUST00000228550 Gm12185Q5NCB2 835 aa29.94■■■□□ 2.38
Pkd1-207ENSMUST00000228550 Cers3Q1A3B0 383 aa29.93■■■□□ 2.38
Pkd1-207ENSMUST00000228550 Iqsec3Q3TES0 1195 aa29.93■■■□□ 2.38
Pkd1-207ENSMUST00000228550 Mrs2Q5NCE8 434 aa29.93■■■□□ 2.38
Pkd1-207ENSMUST00000228550 Mrps5Q99N87 432 aaKnown RBP29.93■■■□□ 2.38
Pkd1-207ENSMUST00000228550 ScaperF8VQ70 1398 aaKnown RBP29.92■■■□□ 2.38
Pkd1-207ENSMUST00000228550 Col1a2Q01149 1372 aa29.91■■■□□ 2.38
Pkd1-207ENSMUST00000228550 Uhrf1bp1B2KF50 1429 aa29.91■■■□□ 2.38
Pkd1-207ENSMUST00000228550 Stra8P70278 393 aa29.91■■■□□ 2.38
Pkd1-207ENSMUST00000228550 1810065E05RikQ5NC41 235 aa29.91■■■□□ 2.38
Pkd1-207ENSMUST00000228550 Srp68Q8BMA6 625 aaKnown RBP29.91■■■□□ 2.38
Pkd1-207ENSMUST00000228550 Togaram1Q6A070 1776 aaKnown RBP29.9■■■□□ 2.38
Pkd1-207ENSMUST00000228550 Nsfl1cQ9CZ44 370 aaKnown RBP29.89■■■□□ 2.38
Pkd1-207ENSMUST00000228550 Rapgef4Q9EQZ6 1011 aa29.89■■■□□ 2.38
Pkd1-207ENSMUST00000228550 Eif4a1P60843 406 aaKnown RBP29.88■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Tnnt1O88346 262 aa29.87■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Strn4P58404 760 aa29.87■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Prkab2Q6PAM0 271 aa29.87■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Senp3Q9EP97 568 aaKnown RBP29.87■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Trip6Q9Z1Y4 480 aa29.87■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Pibf1E9Q6K3 756 aa29.86■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Gigyf1Q99MR1 1044 aaKnown RBP29.86■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Kcnn1Q9EQR3 537 aa29.86■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Uspl1Q3ULM6 1089 aa29.85■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Zcwpw1Q6IR42 630 aa29.85■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Rbm26Q6NZN0 1012 aaKnown RBP29.85■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Col4a1P02463 1669 aa29.85■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Bcl2l13P59017 434 aa29.84■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Dlg5E9Q9R9 1921 aa29.84■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Ddx60E9PZQ1 1711 aa29.83■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Wdhd1P59328 1117 aa29.83■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Klhdc4Q921I2 584 aa29.83■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Taf7Q9R1C0 341 aa29.83■■■□□ 2.37
Pkd1-207ENSMUST00000228550 Prr29B1ARI9 187 aa29.82■■■□□ 2.36
Pkd1-207ENSMUST00000228550 GckrQ91X44 587 aa29.82■■■□□ 2.36
Pkd1-207ENSMUST00000228550 Foxp4Q9DBY0 795 aaKnown RBP29.82■■■□□ 2.36
Pkd1-207ENSMUST00000228550 StrcQ8VIM6 1809 aa29.82■■■□□ 2.36
Pkd1-207ENSMUST00000228550 Prr5lA2AVJ5 370 aa29.81■■■□□ 2.36
Pkd1-207ENSMUST00000228550 Rnf180Q3U827 592 aa29.81■■■□□ 2.36
Pkd1-207ENSMUST00000228550 Sgip1Q8VD37 806 aa29.81■■■□□ 2.36
Pkd1-207ENSMUST00000228550 Pdia6Q922R8 440 aaKnown RBP29.81■■■□□ 2.36
Pkd1-207ENSMUST00000228550 Dpf1Q9QX66 387 aa29.81■■■□□ 2.36
Pkd1-207ENSMUST00000228550 Lama4P97927 1816 aa29.8■■■□□ 2.36
Pkd1-207ENSMUST00000228550 Tgfb2P27090 414 aa29.8■■■□□ 2.36
Pkd1-207ENSMUST00000228550 Fkbp4P30416 458 aa29.8■■■□□ 2.36
Pkd1-207ENSMUST00000228550 U2surpQ6NV83 1029 aaKnown RBP29.8■■■□□ 2.36
Pkd1-207ENSMUST00000228550 Ubn2Q80WC1 1314 aa29.79■■■□□ 2.36
Pkd1-207ENSMUST00000228550 CastP51125 788 aa29.79■■■□□ 2.36
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms