RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 PigbQ9JJQ0 542 aa25.72■■□□□ 1.71
Lig3-209ENSMUST00000173009 Chpf2Q3UU43 768 aa25.71■■□□□ 1.71
Lig3-209ENSMUST00000173009 Jmjd4Q8BFT6 427 aa25.71■■□□□ 1.71
Lig3-209ENSMUST00000173009 Igsf1Q7TQA1 1317 aa25.71■■□□□ 1.71
Lig3-209ENSMUST00000173009 Col1a2Q01149 1372 aa25.7■■□□□ 1.71
Lig3-209ENSMUST00000173009 Nsd3Q6P2L6 1439 aa25.7■■□□□ 1.7
Lig3-209ENSMUST00000173009 Erbb3Q61526 1339 aa25.7■■□□□ 1.7
Lig3-209ENSMUST00000173009 Vamp4O70480 141 aa25.69■■□□□ 1.7
Lig3-209ENSMUST00000173009 Dcaf5Q80T85 946 aa25.69■■□□□ 1.7
Lig3-209ENSMUST00000173009 Sos2Q02384 1333 aa25.69■■□□□ 1.7
Lig3-209ENSMUST00000173009 Gm6268A2A3U9 297 aa25.69■■□□□ 1.7
Lig3-209ENSMUST00000173009 Shank3Q4ACU6 1730 aa25.68■■□□□ 1.7
Lig3-209ENSMUST00000173009 Iqsec3Q3TES0 1195 aa25.67■■□□□ 1.7
Lig3-209ENSMUST00000173009 Kiaa0319lQ8K135 1048 aa25.67■■□□□ 1.7
Lig3-209ENSMUST00000173009 Atf5O70191 283 aa25.67■■□□□ 1.7
Lig3-209ENSMUST00000173009 Fkbp4P30416 458 aa25.67■■□□□ 1.7
Lig3-209ENSMUST00000173009 Cnnm1Q0GA42 951 aa25.67■■□□□ 1.7
Lig3-209ENSMUST00000173009 Vars2Q3U2A8 1060 aa25.67■■□□□ 1.7
Lig3-209ENSMUST00000173009 TefQ9JLC6 301 aa25.67■■□□□ 1.7
Lig3-209ENSMUST00000173009 Ccdc6D3YZP9 469 aa25.66■■□□□ 1.7
Lig3-209ENSMUST00000173009 Bcl2l13P59017 434 aa25.66■■□□□ 1.7
Lig3-209ENSMUST00000173009 GckrQ91X44 587 aa25.66■■□□□ 1.7
Lig3-209ENSMUST00000173009 L3mbtl2P59178 703 aa25.64■■□□□ 1.7
Lig3-209ENSMUST00000173009 Q8BT18 775 aa25.64■■□□□ 1.7
Lig3-209ENSMUST00000173009 Taf7Q9R1C0 341 aa25.64■■□□□ 1.7
Lig3-209ENSMUST00000173009 Bicdl1A0JNT9 577 aa25.64■■□□□ 1.69
Lig3-209ENSMUST00000173009 Ccdc60Q8C4J0 545 aa25.64■■□□□ 1.69
Lig3-209ENSMUST00000173009 Plekhh1Q80TI1 1356 aa25.62■■□□□ 1.69
Lig3-209ENSMUST00000173009 Rangap1P46061 589 aaKnown RBP25.62■■□□□ 1.69
Lig3-209ENSMUST00000173009 Pdia6Q922R8 440 aaKnown RBP25.62■■□□□ 1.69
Lig3-209ENSMUST00000173009 Msh6P54276 1358 aaKnown RBP25.62■■□□□ 1.69
Lig3-209ENSMUST00000173009 Prkab2Q6PAM0 271 aa25.61■■□□□ 1.69
Lig3-209ENSMUST00000173009 Abca3Q8R420 1704 aa25.61■■□□□ 1.69
Lig3-209ENSMUST00000173009 Snapc4Q8BP86 1333 aa25.61■■□□□ 1.69
Lig3-209ENSMUST00000173009 Flad1Q8R123 492 aa25.61■■□□□ 1.69
Lig3-209ENSMUST00000173009 Tiam2Q6ZPF3 1715 aa25.61■■□□□ 1.69
Lig3-209ENSMUST00000173009 Clcn1Q64347 994 aa25.59■■□□□ 1.69
Lig3-209ENSMUST00000173009 KarsQ99MN1 595 aaKnown RBP25.59■■□□□ 1.69
Lig3-209ENSMUST00000173009 Ccdc171E9Q1U1 1324 aa25.59■■□□□ 1.69
Lig3-209ENSMUST00000173009 Pim2Q62070 370 aa25.59■■□□□ 1.69
Lig3-209ENSMUST00000173009 Ankrd13dQ6PD24 605 aa25.59■■□□□ 1.69
Lig3-209ENSMUST00000173009 Adamtsl1Q8BLI0 1745 aa25.59■■□□□ 1.69
Lig3-209ENSMUST00000173009 G3bp1P97855 465 aaKnown RBP25.58■■□□□ 1.69
Lig3-209ENSMUST00000173009 Syde2E9PUP1 1314 aa25.57■■□□□ 1.68
Lig3-209ENSMUST00000173009 Kank1E9Q238 1360 aa25.57■■□□□ 1.68
Lig3-209ENSMUST00000173009 Adcy9P51830 1353 aa25.57■■□□□ 1.68
Lig3-209ENSMUST00000173009 PsapQ61207 557 aaKnown RBP25.56■■□□□ 1.68
Lig3-209ENSMUST00000173009 Miga2Q8BK03 593 aa25.56■■□□□ 1.68
Lig3-209ENSMUST00000173009 Tmem119Q8R138 280 aa25.56■■□□□ 1.68
Lig3-209ENSMUST00000173009 Dlg5E9Q9R9 1921 aa25.56■■□□□ 1.68
Lig3-209ENSMUST00000173009 Pde4dQ01063 747 aa25.55■■□□□ 1.68
Lig3-209ENSMUST00000173009 SympkQ80X82 1284 aa25.55■■□□□ 1.68
Lig3-209ENSMUST00000173009 Col22a1E9Q7P1 1613 aa25.55■■□□□ 1.68
Lig3-209ENSMUST00000173009 Chl1P70232 1209 aa25.54■■□□□ 1.68
Lig3-209ENSMUST00000173009 Plekhm2Q80TQ5 1018 aa25.54■■□□□ 1.68
Lig3-209ENSMUST00000173009 Mylk2Q8VCR8 613 aa25.54■■□□□ 1.68
Lig3-209ENSMUST00000173009 Nectin2P32507 530 aa25.54■■□□□ 1.68
Lig3-209ENSMUST00000173009 Aplp1Q03157 653 aa25.53■■□□□ 1.68
Lig3-209ENSMUST00000173009 Gm12185Q5NCB2 835 aa25.53■■□□□ 1.68
Lig3-209ENSMUST00000173009 Slc39a6Q8C145 765 aa25.53■■□□□ 1.68
Lig3-209ENSMUST00000173009 Ttc41Q692V3 1318 aa25.53■■□□□ 1.68
Lig3-209ENSMUST00000173009 Tmco5bQ80X59 307 aa25.52■■□□□ 1.68
Lig3-209ENSMUST00000173009 Apbb1Q9QXJ1 710 aa25.51■■□□□ 1.67
Lig3-209ENSMUST00000173009 Upf2A2AT37 1269 aaKnown RBP25.51■■□□□ 1.67
Lig3-209ENSMUST00000173009 Cnksr1A2A9K7 700 aa25.5■■□□□ 1.67
Lig3-209ENSMUST00000173009 Smarcc1P97496 1104 aa25.5■■□□□ 1.67
Lig3-209ENSMUST00000173009 Apba2P98084 750 aa25.49■■□□□ 1.67
Lig3-209ENSMUST00000173009 Sv2bQ8BG39 683 aa25.49■■□□□ 1.67
Lig3-209ENSMUST00000173009 DiexfQ8BTT6 772 aaKnown RBP25.49■■□□□ 1.67
Lig3-209ENSMUST00000173009 Fam83gQ5SWY7 812 aa25.48■■□□□ 1.67
Lig3-209ENSMUST00000173009 Rwdd1Q9CQK7 243 aa25.48■■□□□ 1.67
Lig3-209ENSMUST00000173009 Gm13023A2A8N2 498 aa25.47■■□□□ 1.67
Lig3-209ENSMUST00000173009 Cers3Q1A3B0 383 aa25.47■■□□□ 1.67
Lig3-209ENSMUST00000173009 Nav1Q8CH77 1875 aa25.46■■□□□ 1.67
Lig3-209ENSMUST00000173009 CoblQ5NBX1 1337 aaKnown RBP25.46■■□□□ 1.67
Lig3-209ENSMUST00000173009 Cavin2Q63918 418 aaKnown RBP25.46■■□□□ 1.67
Lig3-209ENSMUST00000173009 Nip7Q9CXK8 180 aaKnown RBP25.46■■□□□ 1.67
Lig3-209ENSMUST00000173009 Igfbp6P47880 238 aa25.45■■□□□ 1.66
Lig3-209ENSMUST00000173009 CoilQ5SU73 570 aa25.44■■□□□ 1.66
Lig3-209ENSMUST00000173009 Zbtb1Q91VL9 713 aa25.44■■□□□ 1.66
Lig3-209ENSMUST00000173009 Kndc1Q0KK55 1742 aa25.44■■□□□ 1.66
Lig3-209ENSMUST00000173009 Col4a1P02463 1669 aa25.44■■□□□ 1.66
Lig3-209ENSMUST00000173009 Hmgb2P30681 210 aaKnown RBP25.44■■□□□ 1.66
Lig3-209ENSMUST00000173009 Gigyf1Q99MR1 1044 aaKnown RBP25.44■■□□□ 1.66
Lig3-209ENSMUST00000173009 Morc2aQ69ZX6 1030 aa25.43■■□□□ 1.66
Lig3-209ENSMUST00000173009 Ric1Q69ZJ7 1422 aa25.43■■□□□ 1.66
Lig3-209ENSMUST00000173009 Slfnl1Q8BHW9 410 aa25.41■■□□□ 1.66
Lig3-209ENSMUST00000173009 Ttll7A4Q9F0 912 aa25.41■■□□□ 1.66
Lig3-209ENSMUST00000173009 Cyp2d11P24457 504 aa25.41■■□□□ 1.66
Lig3-209ENSMUST00000173009 Aifm3Q3TY86 605 aa25.41■■□□□ 1.66
Lig3-209ENSMUST00000173009 MetP16056 1379 aa25.4■■□□□ 1.66
Lig3-209ENSMUST00000173009 Q3UPC7 1272 aa25.4■■□□□ 1.66
Lig3-209ENSMUST00000173009 MarsQ68FL6 902 aaKnown RBP25.4■■□□□ 1.66
Lig3-209ENSMUST00000173009 Trim52Q8CDV4 233 aa25.4■■□□□ 1.66
Lig3-209ENSMUST00000173009 Erbb4Q61527 1308 aa25.39■■□□□ 1.66
Lig3-209ENSMUST00000173009 BcorQ8CGN4 1759 aa25.39■■□□□ 1.65
Lig3-209ENSMUST00000173009 Fam198bQ3UPI1 517 aa25.38■■□□□ 1.65
Lig3-209ENSMUST00000173009 Ric3Q8BPM6 367 aa25.38■■□□□ 1.65
Lig3-209ENSMUST00000173009 Znf330Q922H9 316 aa25.38■■□□□ 1.65
Lig3-209ENSMUST00000173009 OscarQ8VBT3 265 aa25.37■■□□□ 1.65
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms