RNA–Protein interactions for RNA: ENSMUST00000102601.9

Trappc1-202, Transcript of Trafficking protein particle complex subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trappc1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc1-202ENSMUST00000102601 Llgl2Q3TJ91 1027 aa11.9□□□□□ -0.5
Trappc1-202ENSMUST00000102601 Cpsf1Q9EPU4 1441 aaKnown RBP11.9□□□□□ -0.5
Trappc1-202ENSMUST00000102601 D830030K20RikE9PYQ5 218 aa11.89□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Gm3043K7N693 218 aa11.89□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Gm16440K7N6G6 218 aa11.89□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Gm2244L7N2A3 218 aa11.89□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Gm3278L7N2D2 218 aa11.89□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Gm8271L7N2E2 218 aa11.89□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Pla2g5P97391 137 aa11.89□□□□□ -0.51
Trappc1-202ENSMUST00000102601 PrimpolQ6P1E7 537 aa11.89□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Idi2Q8BFZ6 227 aa11.89□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Trpm7Q923J1 1863 aa11.89□□□□□ -0.51
Trappc1-202ENSMUST00000102601 NcanP55066 1268 aa11.88□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Usp48Q3V0C5 1052 aa11.88□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Tango6Q8C3S2 1079 aa11.88□□□□□ -0.51
Trappc1-202ENSMUST00000102601 ApobrQ8VBT6 942 aa11.88□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Szt2A2A9C3 3431 aa11.88□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Cdk12Q14AX6 1484 aaKnown RBP11.88□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Cntnap3E9PY62 1287 aa11.87□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Slurp2P0DP59 97 aa11.87□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Champ1Q8K327 802 aaKnown RBP11.87□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Map3k19E9Q3S4 1311 aa11.86□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Speer4bQ9D9F7 267 aa11.86□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Zfp646Q6NV66 1788 aa11.86□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Trpm3Q5F4S9 1721 aa11.86□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Lmnb1P14733 588 aaKnown RBP11.85□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Evi5P97366 809 aa11.85□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Smarcc1P97496 1104 aa11.85□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Foxn1Q61575 648 aa11.85□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Syt17Q920M7 470 aa11.85□□□□□ -0.51
Trappc1-202ENSMUST00000102601 AceP09470 1312 aa11.85□□□□□ -0.51
Trappc1-202ENSMUST00000102601 RalgapbQ8BQZ4 1484 aa11.84□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Pou3f3P31361 497 aa11.84□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Sp8Q8BMJ8 486 aa11.84□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Q8C6G1 249 aa11.84□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Adamts13Q769J6 1426 aa11.84□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Adgrb1Q3UHD1 1582 aa11.84□□□□□ -0.51
Trappc1-202ENSMUST00000102601 Map2k1P31938 393 aa11.83□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Unc5clQ6R653 518 aa11.83□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Lrch3Q8BVU0 778 aa11.83□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Cd248Q91V98 765 aa11.83□□□□□ -0.52
Trappc1-202ENSMUST00000102601 AfdnQ9QZQ1 1820 aaKnown RBP11.83□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Col15a1O35206 1367 aa11.82□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Ldlrad1D3YYZ1 218 aa11.82□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Gm10471E9Q1C7 252 aa11.82□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Ccnl1Q52KE7 532 aaKnown RBP11.82□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Rbm26Q6NZN0 1012 aaKnown RBP11.82□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Usp40Q8BWR4 1235 aa11.82□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Glis2Q8VDL9 521 aa11.82□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Sipa1l1Q8C0T5 1782 aa11.82□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Brpf1B2RRD7 1212 aa11.81□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Gsto1O09131 240 aa11.81□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Larp1Q6ZQ58 1072 aaKnown RBP11.81□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Ppargc1bQ8VHJ7 1014 aa11.81□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Kif16bB1AVY7 1312 aa11.81□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Ptcd1Q8C2E4 695 aaKnown RBP11.8□□□□□ -0.52
Trappc1-202ENSMUST00000102601 RtcbQ99LF4 505 aaKnown RBP11.8□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Myo15bI7HPW8 3033 aa11.78□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Ubxn2aQ99KJ0 258 aa11.78□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Msh6P54276 1358 aaKnown RBP11.78□□□□□ -0.52
Trappc1-202ENSMUST00000102601 Pdzrn4E9PUZ9 1014 aa11.77□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Prpmp5E9PXN1 296 aa11.77□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Miga2Q8BK03 593 aa11.77□□□□□ -0.53
Trappc1-202ENSMUST00000102601 TkfcQ8VC30 578 aa11.77□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Znf335A2A5K6 1337 aa11.77□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Gm16486A0A1D5RMD1 1434 aa11.77□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Rassf10Q8BL43 508 aa11.76□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Mphosph9A6H5Y1 991 aa11.75□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Wdhd1P59328 1117 aa11.75□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Fxr1Q61584 677 aaKnown RBP11.75□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Aebp2Q9Z248 504 aaKnown RBP11.75□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Gm42688A0A0R3P9D1 673 aa11.74□□□□□ -0.53
Trappc1-202ENSMUST00000102601 March10E9PX79 788 aa11.74□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Ccdc142Q8CAI1 738 aa11.74□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Amhr2Q8K592 568 aa11.74□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Col5a2Q3U962 1497 aa11.74□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Bach1P97302 739 aa11.73□□□□□ -0.53
Trappc1-202ENSMUST00000102601 RubcnQ80U62 956 aa11.73□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Dcdc2bF7BCK0 340 aa11.72□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Gja5Q01231 358 aa11.72□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Srp68Q8BMA6 625 aaKnown RBP11.71□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Exosc9Q9JHI7 438 aaKnown RBP11.71□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Hdac6Q9Z2V5 1149 aa11.71□□□□□ -0.53
Trappc1-202ENSMUST00000102601 Pappa2E9PZ87 1789 aa11.71□□□□□ -0.54
Trappc1-202ENSMUST00000102601 Slc4a1apE9PX68 744 aa11.7□□□□□ -0.54
Trappc1-202ENSMUST00000102601 Pkd2O35245 966 aa11.7□□□□□ -0.54
Trappc1-202ENSMUST00000102601 Ano8Q6PB70 1060 aa11.7□□□□□ -0.54
Trappc1-202ENSMUST00000102601 Pdzph1Q8BGR1 1238 aa11.7□□□□□ -0.54
Trappc1-202ENSMUST00000102601 Ly6dP35459 127 aa11.69□□□□□ -0.54
Trappc1-202ENSMUST00000102601 LtbrP50284 415 aa11.69□□□□□ -0.54
Trappc1-202ENSMUST00000102601 Tm4sf4Q91XD3 202 aa11.69□□□□□ -0.54
Trappc1-202ENSMUST00000102601 Tktl2Q9D4D4 627 aa11.69□□□□□ -0.54
Trappc1-202ENSMUST00000102601 Nphp4P59240 1425 aa11.69□□□□□ -0.54
Trappc1-202ENSMUST00000102601 CenpjQ569L8 1344 aa11.68□□□□□ -0.54
Trappc1-202ENSMUST00000102601 FanciQ8K368 1330 aa11.68□□□□□ -0.54
Trappc1-202ENSMUST00000102601 Aplp2Q06335 707 aa11.68□□□□□ -0.54
Trappc1-202ENSMUST00000102601 Uhrf1bp1B2KF50 1429 aa11.68□□□□□ -0.54
Trappc1-202ENSMUST00000102601 Ubr1O70481 1757 aa11.67□□□□□ -0.54
Trappc1-202ENSMUST00000102601 Chd4Q6PDQ2 1915 aaKnown RBP11.66□□□□□ -0.54
Trappc1-202ENSMUST00000102601 Rgl3Q3UYI5 709 aa11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms