RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Stxbp4Q9WV89 557 aa25.24■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Ces1hD3Z298 562 aa25.24■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Map9Q3TRR0 646 aa25.24■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Pknox2Q8BG99 474 aa25.23■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Dmrt2Q8BG36 561 aa25.23■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Slc7a3P70423 618 aa25.23■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Ltv1Q6NSQ7 470 aaKnown RBP25.23■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Gas2l3Q3UWW6 683 aa25.22■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 GnpatP98192 678 aa25.22■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Rai14Q9EP71 979 aaKnown RBP25.22■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Klc3Q91W40 508 aa25.22■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Jmjd4Q8BFT6 427 aa25.21■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Nol11Q8BJW5 723 aaKnown RBP25.21■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Ttc5Q99LG4 440 aa25.21■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 OvosQ3UU35 1456 aa25.21■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Jakmip2D3YXK0 820 aa25.21■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Rfx7F8VPJ6 1459 aa25.21■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Cavin1O54724 392 aa25.2■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Trim11Q99PQ2 467 aa25.2■■□□□ 1.63
Smarcc1-201ENSMUST00000088716 Slc12a5Q91V14 1138 aa25.2■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 VeztQ3ZK22 780 aa25.2■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Trim30cD3YVI9 513 aa25.2■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Mlh3A0A1Y7VMP7 1443 aa25.2■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Ccdc155Q80VJ8 648 aa25.19■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Tmem67Q8BR76 992 aa25.19■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Otud6bQ8K2H2 294 aa25.19■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Ddx19aQ61655 478 aaKnown RBP25.19■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Smc5Q8CG46 1101 aaKnown RBP25.19■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Ccdc181Q80ZU5 509 aa25.18■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Hmgb2P30681 210 aaKnown RBP25.18■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Igf2bp2Q5SF07 592 aaKnown RBP25.18■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Irf9Q61179 399 aa25.18■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Soga3Q6NZL0 945 aa25.17■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Idi2Q8BFZ6 227 aa25.17■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Pik3r4Q8VD65 1358 aa25.17■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Brms1Q99N20 246 aa25.17■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Rbm27Q5SFM8 1060 aaKnown RBP25.16■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 SrrtQ99MR6 875 aaKnown RBP25.16■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Acsbg1Q99PU5 721 aa25.16■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Ift57Q8BXG3 429 aa25.16■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Zmym3Q9JLM4 1370 aa25.16■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Q3UPC7 1272 aa25.15■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Gbp4Q61107 620 aa25.15■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Tmem87bQ8BKU8 555 aa25.15■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 MicalclQ9D5U9 680 aa25.15■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Bcar3Q9QZK2 820 aa25.14■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Kcnj4P52189 445 aa25.14■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 Knop1Q9Z2Q2 478 aaKnown RBP25.14■■□□□ 1.62
Smarcc1-201ENSMUST00000088716 ArsiQ32KI9 573 aa25.14■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 TxlnaQ6PAM1 554 aaKnown RBP25.14■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Tsg101Q61187 391 aa25.13■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Rnf41Q8BH75 317 aa25.13■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 ImpactO55091 318 aa25.13■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Rad23bP54728 416 aa25.13■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Fam135aQ6NS59 1506 aa25.13■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Mrvi1Q9WUX5 899 aaKnown RBP25.13■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Tbc1d7Q9D0K0 293 aa25.12■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Myd88P22366 296 aa25.12■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Polr3dQ91WD1 398 aa25.12■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Limch1Q3UH68 1057 aa25.12■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Pde4dQ01063 747 aa25.12■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Ccdc150Q8CDI7 1110 aa25.12■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Spag5Q7TME2 1165 aa25.11■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Traf3ip1Q149C2 625 aa25.11■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Chpf2Q3UU43 768 aa25.11■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Txndc16Q7TN22 820 aa25.11■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Znf131Q8K3J5 619 aa25.11■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Gnat3Q3V3I2 354 aa25.11■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 TimelessQ9R1X4 1197 aa25.11■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Gps2Q921N8 327 aa25.1■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Map3k2Q61083 619 aa25.1■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Tmc2Q8R4P4 888 aa25.1■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Paxip1Q6NZQ4 1056 aa25.1■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Spg7Q3ULF4 781 aa25.09■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Olr1Q9EQ09 363 aa25.09■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 InsrP15208 1372 aa25.09■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Trim25Q61510 634 aaKnown RBP25.09■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Il1rapl2Q9ERS6 686 aa25.09■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 AI481877A2ALV5 1481 aa25.09■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Grin2aP35436 1464 aa25.09■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Tacc1Q6Y685 774 aa25.09■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Cdan1Q8CC12 1239 aa25.09■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 DroshaQ5HZJ0 1373 aaKnown RBP25.08■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Nsfl1cQ9CZ44 370 aaKnown RBP25.08■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Luzp1Q8R4U7 1068 aaKnown RBP25.08■■□□□ 1.61
Smarcc1-201ENSMUST00000088716 Slf2Q6P9P0 1278 aa25.08■■□□□ 1.6
Smarcc1-201ENSMUST00000088716 Mctp2Q5RJH2 878 aa25.07■■□□□ 1.6
Smarcc1-201ENSMUST00000088716 Jade2Q6ZQF7 829 aa25.07■■□□□ 1.6
Smarcc1-201ENSMUST00000088716 Mcm3P25206 812 aaKnown RBP25.07■■□□□ 1.6
Smarcc1-201ENSMUST00000088716 Tspyl3Q3UYP3 334 aa25.07■■□□□ 1.6
Smarcc1-201ENSMUST00000088716 Ncoa1P70365 1447 aa25.07■■□□□ 1.6
Smarcc1-201ENSMUST00000088716 Farp2Q91VS8 1065 aa25.07■■□□□ 1.6
Smarcc1-201ENSMUST00000088716 Top2bQ64511 1612 aa25.06■■□□□ 1.6
Smarcc1-201ENSMUST00000088716 Smtnl1Q99LM3 459 aa25.06■■□□□ 1.6
Smarcc1-201ENSMUST00000088716 Cdca7Q9D0M2 382 aa25.06■■□□□ 1.6
Smarcc1-201ENSMUST00000088716 Zbtb22Q9Z0G7 638 aa25.06■■□□□ 1.6
Smarcc1-201ENSMUST00000088716 Nap1l2P51860 460 aa25.06■■□□□ 1.6
Smarcc1-201ENSMUST00000088716 Cct2P80314 535 aaKnown RBP25.06■■□□□ 1.6
Smarcc1-201ENSMUST00000088716 Cc2d1bQ8BRN9 848 aa25.06■■□□□ 1.6
Smarcc1-201ENSMUST00000088716 PrkcshO08795 521 aa25.05■■□□□ 1.6
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms