RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Gtpbp4Q99ME9 634 aaKnown RBP13.45□□□□□ -0.26
Trim61-201ENSMUST00000078409 Dnajc10Q9DC23 793 aa13.45□□□□□ -0.26
Trim61-201ENSMUST00000078409 FocadA2AKG8 1798 aa13.45□□□□□ -0.26
Trim61-201ENSMUST00000078409 Gm21190A0A0G2JGJ6 266 aa13.45□□□□□ -0.26
Trim61-201ENSMUST00000078409 Akt1s1Q9D1F4 257 aa13.45□□□□□ -0.26
Trim61-201ENSMUST00000078409 Kif23E9Q5G3 953 aa13.44□□□□□ -0.26
Trim61-201ENSMUST00000078409 VgfQ0VGU4 617 aa13.44□□□□□ -0.26
Trim61-201ENSMUST00000078409 Fam114a1Q9D281 569 aa13.44□□□□□ -0.26
Trim61-201ENSMUST00000078409 Fmnl2A2APV2 1086 aa13.43□□□□□ -0.26
Trim61-201ENSMUST00000078409 Paxip1Q6NZQ4 1056 aa13.43□□□□□ -0.26
Trim61-201ENSMUST00000078409 Pnpla7A2AJ88 1352 aa13.43□□□□□ -0.26
Trim61-201ENSMUST00000078409 Mier1Q5UAK0 511 aa13.43□□□□□ -0.26
Trim61-201ENSMUST00000078409 Sik1Q60670 779 aa13.43□□□□□ -0.26
Trim61-201ENSMUST00000078409 Afg3l2Q8JZQ2 802 aaKnown RBP13.43□□□□□ -0.26
Trim61-201ENSMUST00000078409 Slit1Q80TR4 1531 aa13.42□□□□□ -0.26
Trim61-201ENSMUST00000078409 Exosc9Q9JHI7 438 aaKnown RBP13.42□□□□□ -0.26
Trim61-201ENSMUST00000078409 Exoc5Q3TPX4 708 aa13.41□□□□□ -0.26
Trim61-201ENSMUST00000078409 Dennd6aQ8BH65 605 aa13.41□□□□□ -0.26
Trim61-201ENSMUST00000078409 Nol11Q8BJW5 723 aaKnown RBP13.41□□□□□ -0.26
Trim61-201ENSMUST00000078409 R3hcc1Q8BSI6 488 aa13.41□□□□□ -0.26
Trim61-201ENSMUST00000078409 Sgip1Q8VD37 806 aa13.41□□□□□ -0.26
Trim61-201ENSMUST00000078409 Cep120Q7TSG1 988 aa13.41□□□□□ -0.26
Trim61-201ENSMUST00000078409 Nlgn1Q99K10 843 aa13.41□□□□□ -0.26
Trim61-201ENSMUST00000078409 TatQ8QZR1 454 aa13.4□□□□□ -0.26
Trim61-201ENSMUST00000078409 Usp35M0QWN7 1009 aa13.4□□□□□ -0.27
Trim61-201ENSMUST00000078409 Ice2Q3UZ18 988 aaKnown RBP13.4□□□□□ -0.27
Trim61-201ENSMUST00000078409 Bsdc1Q80Y55 427 aa13.4□□□□□ -0.27
Trim61-201ENSMUST00000078409 Kif16bB1AVY7 1312 aa13.39□□□□□ -0.27
Trim61-201ENSMUST00000078409 AppP12023 770 aa13.39□□□□□ -0.27
Trim61-201ENSMUST00000078409 Smg6P61406 1418 aaKnown RBP13.39□□□□□ -0.27
Trim61-201ENSMUST00000078409 Gys2Q8VCB3 704 aa13.39□□□□□ -0.27
Trim61-201ENSMUST00000078409 Srcin1Q9QWI6 1250 aa13.39□□□□□ -0.27
Trim61-201ENSMUST00000078409 Ubr1O70481 1757 aa13.38□□□□□ -0.27
Trim61-201ENSMUST00000078409 Scn7aB1AYL1 1681 aa13.38□□□□□ -0.27
Trim61-201ENSMUST00000078409 InsrP15208 1372 aa13.38□□□□□ -0.27
Trim61-201ENSMUST00000078409 Plekhd1B2RPU2 505 aa13.38□□□□□ -0.27
Trim61-201ENSMUST00000078409 Ddrgk1Q80WW9 315 aa13.38□□□□□ -0.27
Trim61-201ENSMUST00000078409 Hirip3Q8BLH7 601 aa13.38□□□□□ -0.27
Trim61-201ENSMUST00000078409 Gripap1Q8VD04 806 aa13.38□□□□□ -0.27
Trim61-201ENSMUST00000078409 Chmp4cQ9D7F7 232 aa13.38□□□□□ -0.27
Trim61-201ENSMUST00000078409 Chd4Q6PDQ2 1915 aaKnown RBP13.37□□□□□ -0.27
Trim61-201ENSMUST00000078409 Igf2rQ07113 2483 aaKnown RBP13.37□□□□□ -0.27
Trim61-201ENSMUST00000078409 Abca3Q8R420 1704 aa13.37□□□□□ -0.27
Trim61-201ENSMUST00000078409 Kcnh4A2A5F7 1018 aa13.37□□□□□ -0.27
Trim61-201ENSMUST00000078409 CrklP47941 303 aa13.37□□□□□ -0.27
Trim61-201ENSMUST00000078409 Zhx1P70121 873 aa13.37□□□□□ -0.27
Trim61-201ENSMUST00000078409 Vps37dQ810I0 261 aa13.37□□□□□ -0.27
Trim61-201ENSMUST00000078409 Hmgb2P30681 210 aaKnown RBP13.36□□□□□ -0.27
Trim61-201ENSMUST00000078409 Plagl1Q9JLQ4 704 aa13.36□□□□□ -0.27
Trim61-201ENSMUST00000078409 Sos2Q02384 1333 aa13.36□□□□□ -0.27
Trim61-201ENSMUST00000078409 Cdk12Q14AX6 1484 aaKnown RBP13.36□□□□□ -0.27
Trim61-201ENSMUST00000078409 Gse1Q3U3C9 1213 aa13.36□□□□□ -0.27
Trim61-201ENSMUST00000078409 Zpr1Q62384 459 aa13.36□□□□□ -0.27
Trim61-201ENSMUST00000078409 Ankrd13dQ6PD24 605 aa13.36□□□□□ -0.27
Trim61-201ENSMUST00000078409 Exoc8Q6PGF7 716 aa13.36□□□□□ -0.27
Trim61-201ENSMUST00000078409 Fchsd2Q3USJ8 740 aa13.35□□□□□ -0.27
Trim61-201ENSMUST00000078409 Ripk4Q9ERK0 786 aa13.35□□□□□ -0.27
Trim61-201ENSMUST00000078409 Sema3fO88632 785 aa13.34□□□□□ -0.27
Trim61-201ENSMUST00000078409 Map2k1P31938 393 aa13.34□□□□□ -0.27
Trim61-201ENSMUST00000078409 Rad23bP54728 416 aa13.34□□□□□ -0.27
Trim61-201ENSMUST00000078409 Fam198bQ3UPI1 517 aa13.34□□□□□ -0.27
Trim61-201ENSMUST00000078409 Cabp4Q8VHC5 271 aa13.34□□□□□ -0.27
Trim61-201ENSMUST00000078409 IncenpQ9WU62 880 aa13.34□□□□□ -0.27
Trim61-201ENSMUST00000078409 Map2P20357 1828 aa13.34□□□□□ -0.27
Trim61-201ENSMUST00000078409 Ercc6lQ8BHK9 1240 aa13.33□□□□□ -0.28
Trim61-201ENSMUST00000078409 Emilin1Q99K41 1017 aa13.33□□□□□ -0.28
Trim61-201ENSMUST00000078409 Ahnak2E9PYB0 1738 aaKnown RBP13.32□□□□□ -0.28
Trim61-201ENSMUST00000078409 Rad21Q61550 635 aaKnown RBP13.32□□□□□ -0.28
Trim61-201ENSMUST00000078409 Prdm4Q80V63 803 aa13.32□□□□□ -0.28
Trim61-201ENSMUST00000078409 Bms1Q6PGF5 1284 aaKnown RBP13.31□□□□□ -0.28
Trim61-201ENSMUST00000078409 Mtfr1lQ9CWE0 289 aa13.31□□□□□ -0.28
Trim61-201ENSMUST00000078409 Zswim8Q3UHH1 1832 aaKnown RBP13.31□□□□□ -0.28
Trim61-201ENSMUST00000078409 Adgrb1Q3UHD1 1582 aa13.31□□□□□ -0.28
Trim61-201ENSMUST00000078409 Hspa5P20029 655 aaKnown RBP13.31□□□□□ -0.28
Trim61-201ENSMUST00000078409 ErfeQ6PGN1 340 aa13.31□□□□□ -0.28
Trim61-201ENSMUST00000078409 CemipQ8BI06 1361 aa13.3□□□□□ -0.28
Trim61-201ENSMUST00000078409 Trim66Q924W6 1242 aa13.3□□□□□ -0.28
Trim61-201ENSMUST00000078409 Zdbf2Q5SS00 2493 aaKnown RBP13.29□□□□□ -0.28
Trim61-201ENSMUST00000078409 Ccdc173A0JLY1 547 aa13.29□□□□□ -0.28
Trim61-201ENSMUST00000078409 Elp1Q7TT37 1333 aaKnown RBP13.29□□□□□ -0.28
Trim61-201ENSMUST00000078409 Ica1lQ3TY65 431 aa13.29□□□□□ -0.28
Trim61-201ENSMUST00000078409 Ccdc94Q9D6J3 314 aa13.29□□□□□ -0.28
Trim61-201ENSMUST00000078409 Magea6O89010 325 aa13.28□□□□□ -0.28
Trim61-201ENSMUST00000078409 Eid3Q3V124 375 aa13.28□□□□□ -0.28
Trim61-201ENSMUST00000078409 Magea3Q6T340 320 aa13.28□□□□□ -0.28
Trim61-201ENSMUST00000078409 Snrnp27Q8K194 155 aa13.28□□□□□ -0.28
Trim61-201ENSMUST00000078409 MccE9PWI3 1003 aa13.27□□□□□ -0.28
Trim61-201ENSMUST00000078409 Pdia4P08003 638 aaKnown RBP13.27□□□□□ -0.28
Trim61-201ENSMUST00000078409 Ankrd49Q8VE42 238 aa13.27□□□□□ -0.28
Trim61-201ENSMUST00000078409 Fam122aQ9DB52 284 aa13.27□□□□□ -0.28
Trim61-201ENSMUST00000078409 Mre11Q61216 706 aa13.27□□□□□ -0.29
Trim61-201ENSMUST00000078409 Zranb3Q6NZP1 1069 aa13.27□□□□□ -0.29
Trim61-201ENSMUST00000078409 Mrps5Q99N87 432 aaKnown RBP13.27□□□□□ -0.29
Trim61-201ENSMUST00000078409 Rps6ka4Q9Z2B9 773 aa13.27□□□□□ -0.29
Trim61-201ENSMUST00000078409 Shank3Q4ACU6 1730 aa13.27□□□□□ -0.29
Trim61-201ENSMUST00000078409 Tmem132eQ6IEE6 982 aa13.26□□□□□ -0.29
Trim61-201ENSMUST00000078409 Kiaa0319lQ8K135 1048 aa13.26□□□□□ -0.29
Trim61-201ENSMUST00000078409 Cc2d1aQ8K1A6 943 aa13.26□□□□□ -0.29
Trim61-201ENSMUST00000078409 Otud6bQ8K2H2 294 aa13.25□□□□□ -0.29
Trim61-201ENSMUST00000078409 Map7O88735 730 aa13.25□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms