RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Zdhhc9P59268 364 aa26.52■■□□□ 1.84
Ccdc9-201ENSMUST00000041010 Ncoa4Q5U4H9 625 aa26.52■■□□□ 1.84
Ccdc9-201ENSMUST00000041010 Anp32cQ64G17 123 aa26.52■■□□□ 1.84
Ccdc9-201ENSMUST00000041010 Kiaa0753Q6A000 959 aa26.52■■□□□ 1.84
Ccdc9-201ENSMUST00000041010 Gimap6Q8K349 305 aa26.52■■□□□ 1.84
Ccdc9-201ENSMUST00000041010 Swt1Q9DBQ9 907 aa26.52■■□□□ 1.84
Ccdc9-201ENSMUST00000041010 Parp14Q2EMV9 1817 aa26.52■■□□□ 1.84
Ccdc9-201ENSMUST00000041010 Ccdc146E9Q9F7 977 aa26.51■■□□□ 1.84
Ccdc9-201ENSMUST00000041010 Ankrd44B2RXR6 993 aa26.51■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Q3UPC7 1272 aa26.51■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Siglec1Q62230 1695 aa26.51■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Rbm27Q5SFM8 1060 aaKnown RBP26.5■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Kcna6Q61923 529 aa26.5■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Nsd3Q6P2L6 1439 aa26.5■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Trim27Q62158 513 aa26.49■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Tbc1d31Q6NXY1 996 aa26.49■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Gripap1Q8VD04 806 aa26.49■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Cabp4Q8VHC5 271 aa26.49■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Kif3aP28741 701 aa26.49■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Slc35g1Q8BY79 368 aa26.49■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Glipr1l2Q9CQ35 332 aa26.49■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Cyp27a1Q9DBG1 533 aa26.48■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Nfat5Q9WV30 1534 aa26.48■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 MsnP26041 577 aaKnown RBP26.47■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Plekhm2Q80TQ5 1018 aa26.47■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Aldh8a1Q8BH00 487 aa26.47■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 E4f1Q8CCE9 783 aa26.47■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Grpel1Q99LP6 217 aa26.47■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 TimelessQ9R1X4 1197 aa26.47■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Fyb1O35601 819 aa26.47■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Kif4P33174 1231 aa26.47■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Stk11ipQ3TAA7 1072 aa26.47■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Dnajc14Q921R4 703 aa26.47■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Ppp6r3Q922D4 844 aa26.47■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Elp1Q7TT37 1333 aaKnown RBP26.46■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Evi5lH3BKQ3 813 aa26.46■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Tmco5bQ80X59 307 aa26.46■■□□□ 1.83
Ccdc9-201ENSMUST00000041010 Rnf214Q8BFU3 668 aaKnown RBP26.44■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Gm45140A0A0N4SUM8 220 aa26.44■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Nucb1Q02819 459 aaKnown RBP26.43■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Ccdc173A0JLY1 547 aa26.42■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Eif4g2Q62448 906 aaKnown RBP26.42■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Stk31Q99MW1 1018 aa26.42■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Gcc1Q9D4H2 778 aa26.42■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Nckap5lQ6GQX2 1323 aa26.41■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Ncbp1Q3UYV9 790 aaKnown RBP26.41■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Fam13bQ8K2H3 851 aa26.41■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Inpp5bQ8K337 993 aa26.41■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Farp2Q91VS8 1065 aa26.41■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Trpm3Q5F4S9 1721 aa26.41■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Atf3Q60765 181 aa26.41■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Kcnh5Q920E3 988 aa26.4■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Gdpd2Q9ESM6 539 aa26.4■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Hoxc9P09633 260 aa26.4■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Pdia3P27773 505 aaKnown RBP26.4■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Vgll3P85442 326 aa26.4■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Mcm2P97310 904 aa26.4■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Chd1lQ9CXF7 900 aa26.4■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 Gadd45bP22339 160 aa26.39■■□□□ 1.82
Ccdc9-201ENSMUST00000041010 DccP70211 1447 aa26.38■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Tet3Q8BG87 1668 aa26.38■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 HnrnpuQ8VEK3 800 aaKnown RBP26.38■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 MpripP97434 1024 aa26.38■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Pip4k2bQ80XI4 416 aa26.37■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Vamp4O70480 141 aa26.36■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Bach2P97303 839 aa26.36■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Mrps27Q8BK72 415 aaKnown RBP26.36■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Rab11fip3Q8CHD8 1047 aa26.35■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Ptgs1P22437 602 aa26.35■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Mcm10Q0VBD2 885 aa26.35■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Cabp2Q9JLK4 216 aa26.35■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Gm45015A0A140LII9 184 aa26.34■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Gm18336A0A140LIU8 765 aa26.34■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Cdc37l1Q9CZP7 335 aa26.34■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Gli3Q61602 1583 aa26.33■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Gnai1B2RSH2 354 aa26.33■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Kank4Q6P9J5 1016 aa26.33■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Gnai3Q9DC51 354 aa26.33■■□□□ 1.81
Ccdc9-201ENSMUST00000041010 Eya1P97767 591 aa26.32■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Tbc1d30Q69ZT9 766 aa26.32■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Olfml1Q8BSH2 233 aa26.32■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Hvcn1Q3U2S8 269 aa26.32■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Cbx1P83917 185 aaKnown RBP26.31■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 FanclQ9CR14 375 aa26.31■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Arfgef2A2A5R2 1792 aa26.31■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Zfp251Q6PCX8 632 aa26.31■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 TatQ8QZR1 454 aa26.31■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Kdm6aO70546 1401 aa26.3■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Ccne1Q61457 408 aa26.3■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Rnf123Q5XPI3 1314 aa26.3■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Sos1Q62245 1319 aa26.3■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Vwa3bJ9JI28 736 aa26.29■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Fmnl2A2APV2 1086 aa26.29■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Fam184aE9PW83 1143 aa26.28■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Atp2b3Q0VF55 1220 aa26.28■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 NexnQ7TPW1 607 aa26.28■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Cavin1O54724 392 aa26.28■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Zkscan16A2ALW2 728 aa26.27■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Amigo3Q8C2S7 508 aa26.27■■□□□ 1.8
Ccdc9-201ENSMUST00000041010 Irx4Q9QY61 515 aa26.27■■□□□ 1.8
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms