RNA–Protein interactions for RNA: ENSMUST00000039021.10

Ssx2ip-201, Transcript of Afadin- and alpha-actinin-binding protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssx2ip, Length 3,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ip-201ENSMUST00000039021 Idi1P58044 227 aa22.45■■□□□ 1.19
Ssx2ip-201ENSMUST00000039021 Bach1P97302 739 aa22.45■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Nol11Q8BJW5 723 aaKnown RBP22.45■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Cfdp1O88271 295 aaKnown RBP22.44■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Zap70P43404 618 aa22.44■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Cyp2d12Q8BVD2 504 aa22.44■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Plekhg1F6S200 1446 aa22.44■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Kif4P33174 1231 aa22.44■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Chd1lQ9CXF7 900 aa22.44■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Rcan3Q9JKK0 239 aa22.44■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Mmp8O70138 465 aa22.44■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Tlr7P58681 1050 aa22.43■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Jarid2Q62315 1234 aa22.43■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Mrps27Q8BK72 415 aaKnown RBP22.43■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Adamts7Q68SA9 1657 aa22.43■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 CltcQ68FD5 1675 aaKnown RBP22.43■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Znf541Q0GGX2 1363 aa22.42■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Kif20bQ80WE4 1774 aaKnown RBP22.42■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Casc1Q6TDU8 730 aa22.42■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Olfml1Q8BSH2 233 aa22.42■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Ush1cQ9ES64 910 aa22.42■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Vwa3bJ9JI28 736 aa22.41■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Nlgn1Q99K10 843 aa22.41■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Pmfbp1Q9WVQ0 1022 aa22.41■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Usp48Q3V0C5 1052 aa22.41■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Zscan25B2RX31 543 aa22.41■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Atp8b2P98199 1209 aa22.41■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Amotl2Q8K371 772 aa22.41■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Ap3b2Q9JME5 1082 aa22.41■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Gm45015A0A140LII9 184 aa22.4■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Gm18336A0A140LIU8 765 aa22.4■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 EspnlQ3UYR4 1005 aa22.4■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Mphosph10Q810V0 681 aaKnown RBP22.4■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 FancaQ9JL70 1439 aa22.4■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Hoxb7P09024 217 aa22.4■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 4930407I10RikD3Z5T8 1512 aa22.39■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Pdzrn3Q69ZS0 1063 aa22.39■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Samm50Q8BGH2 469 aa22.39■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Tceanc2Q8R2M0 207 aa22.39■■□□□ 1.18
Ssx2ip-201ENSMUST00000039021 Slc35g1Q8BY79 368 aa22.38■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 LlphQ9D945 130 aaKnown RBP22.38■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Mdc1Q5PSV9 1707 aa22.38■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Gm10563F6WIE4 79 aa22.38■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Pa2g4P50580 394 aaKnown RBP22.38■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Mad1l1Q9WTX8 717 aaKnown RBP22.38■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Bms1Q6PGF5 1284 aaKnown RBP22.38■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Mcm3P25206 812 aaKnown RBP22.37■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 AnlnQ8K298 1121 aaKnown RBP22.37■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Becn1O88597 448 aa22.37■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Parp14Q2EMV9 1817 aa22.37■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Usp32F8VPZ3 1604 aa22.37■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 PtpruB1AUH1 1446 aa22.37■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 CgnP59242 1191 aa22.37■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Gzf1Q4VBD9 706 aa22.37■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Brf1Q8CFK2 676 aa22.37■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Phf23Q8BSN5 401 aa22.36■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Rsph4aQ8BYM7 716 aa22.36■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 HypkQ9CR41 129 aa22.36■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Tceal9Q9DD24 104 aa22.36■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Edc3Q8K2D3 508 aaKnown RBP22.36■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Disp3A3KFU9 1347 aa22.36■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Mcmdc2E9Q956 681 aa22.35■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Lmod3E9QA62 571 aa22.35■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Gjb2Q00977 226 aa22.35■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Unc5clQ6R653 518 aa22.35■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Arhgef1Q61210 920 aaKnown RBP22.35■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Cyp2d11P24457 504 aa22.35■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Polr3gQ6NXY9 223 aa22.35■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 PzpQ61838 1495 aa22.34■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Gpatch11Q3UFS4 262 aa22.34■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Fez1Q8K0X8 392 aa22.34■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 KinQ8K339 391 aa22.34■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 PtmsQ9D0J8 101 aaKnown RBP22.34■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Ripk4Q9ERK0 786 aa22.34■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Utp3Q9JI13 469 aaKnown RBP22.33■■□□□ 1.17
Ssx2ip-201ENSMUST00000039021 Spef2Q8C9J3 1734 aa22.33■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Atp6v1dP57746 247 aa22.32■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Nwd1A6H603 1563 aa22.32■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Itsn1Q9Z0R4 1714 aa22.32■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Frmpd2A0A140LI67 1392 aa22.32■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Ier5O89113 308 aa22.32■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 E4f1Q8CCE9 783 aa22.32■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Elmsan1E9Q2I4 1089 aaKnown RBP22.31■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Hoxc9P09633 260 aa22.31■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Astn2Q80Z10 1352 aa22.31■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Smc3Q9CW03 1217 aaKnown RBP22.31■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Gemin5Q8BX17 1502 aaKnown RBP22.3■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Foxp4Q9DBY0 795 aaKnown RBP22.3■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Clcn1Q64347 994 aa22.3■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Irf5P56477 497 aa22.29■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Ppfia3P60469 1194 aa22.29■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 FosbP13346 338 aa22.28■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Tsr2Q8C8T8 191 aa22.28■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Mknk2Q8CDB0 459 aa22.28■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 MyclP10166 368 aa22.28■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Smarce1O54941 411 aaKnown RBP22.28■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Ints3Q7TPD0 1041 aaKnown RBP22.28■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Tpm2P58774 284 aa22.27■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Tgfb1i1Q62219 461 aa22.27■■□□□ 1.16
Ssx2ip-201ENSMUST00000039021 Ccdc155Q80VJ8 648 aa22.27■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms