RNA–Protein interactions for RNA: ENSMUST00000035026.4

Trim42-201, Transcript of Tripartite motif-containing protein 42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim42, Length 2,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42-201ENSMUST00000035026 Amotl1Q9D4H4 968 aa11.12□□□□□ -0.63
Trim42-201ENSMUST00000035026 Rgs17Q9QZB0 210 aa11.12□□□□□ -0.63
Trim42-201ENSMUST00000035026 GakQ99KY4 1305 aa11.12□□□□□ -0.63
Trim42-201ENSMUST00000035026 Exoc5Q3TPX4 708 aa11.12□□□□□ -0.63
Trim42-201ENSMUST00000035026 Stk31Q99MW1 1018 aa11.12□□□□□ -0.63
Trim42-201ENSMUST00000035026 Elp1Q7TT37 1333 aaKnown RBP11.11□□□□□ -0.63
Trim42-201ENSMUST00000035026 Map4k4P97820 1233 aaKnown RBP11.11□□□□□ -0.63
Trim42-201ENSMUST00000035026 Rab11fip3Q8CHD8 1047 aa11.11□□□□□ -0.63
Trim42-201ENSMUST00000035026 Aox2Q5SGK3 1345 aa11.1□□□□□ -0.63
Trim42-201ENSMUST00000035026 Gm21680A0A0G2JGR8 267 aa11.1□□□□□ -0.63
Trim42-201ENSMUST00000035026 Mmp14P53690 582 aa11.1□□□□□ -0.63
Trim42-201ENSMUST00000035026 Speer4bQ9D9F7 267 aa11.1□□□□□ -0.63
Trim42-201ENSMUST00000035026 Usp19Q3UJD6 1360 aa11.1□□□□□ -0.63
Trim42-201ENSMUST00000035026 Esx1O88933 382 aa11.1□□□□□ -0.63
Trim42-201ENSMUST00000035026 Larp1Q6ZQ58 1072 aaKnown RBP11.1□□□□□ -0.63
Trim42-201ENSMUST00000035026 Dhx30Q99PU8 1217 aaKnown RBP11.1□□□□□ -0.63
Trim42-201ENSMUST00000035026 Abca3Q8R420 1704 aa11.1□□□□□ -0.63
Trim42-201ENSMUST00000035026 1700017N19RikA0A087WPJ1 469 aa11.09□□□□□ -0.63
Trim42-201ENSMUST00000035026 Apaf1O88879 1249 aa11.09□□□□□ -0.63
Trim42-201ENSMUST00000035026 Kiaa0319Q5SZV5 1081 aa11.09□□□□□ -0.63
Trim42-201ENSMUST00000035026 Cabp2Q9JLK4 216 aa11.09□□□□□ -0.63
Trim42-201ENSMUST00000035026 Myo5bP21271 1818 aa11.09□□□□□ -0.63
Trim42-201ENSMUST00000035026 TmpoQ61033 693 aaKnown RBP11.09□□□□□ -0.63
Trim42-201ENSMUST00000035026 Sugp2Q8CH09 1067 aa11.09□□□□□ -0.63
Trim42-201ENSMUST00000035026 Ubr2Q6WKZ8 1755 aa11.08□□□□□ -0.64
Trim42-201ENSMUST00000035026 Golga2Q921M4 999 aa11.08□□□□□ -0.64
Trim42-201ENSMUST00000035026 Phkg2Q9DB30 406 aa11.08□□□□□ -0.64
Trim42-201ENSMUST00000035026 Tjp1P39447 1745 aaKnown RBP11.08□□□□□ -0.64
Trim42-201ENSMUST00000035026 Shank3Q4ACU6 1730 aa11.08□□□□□ -0.64
Trim42-201ENSMUST00000035026 Ssfa2Q922B9 1252 aa11.08□□□□□ -0.64
Trim42-201ENSMUST00000035026 Iqcf3Q9D498 203 aa11.08□□□□□ -0.64
Trim42-201ENSMUST00000035026 Pdzd9Q9D9M4 266 aa11.08□□□□□ -0.64
Trim42-201ENSMUST00000035026 Pnpla7A2AJ88 1352 aa11.07□□□□□ -0.64
Trim42-201ENSMUST00000035026 Adamtsl1Q8BLI0 1745 aa11.07□□□□□ -0.64
Trim42-201ENSMUST00000035026 Mapk8ip3Q9ESN9 1337 aa11.07□□□□□ -0.64
Trim42-201ENSMUST00000035026 Uhrf1bp1B2KF50 1429 aa11.07□□□□□ -0.64
Trim42-201ENSMUST00000035026 Eif3bQ8JZQ9 803 aaKnown RBP11.07□□□□□ -0.64
Trim42-201ENSMUST00000035026 Lrit1Q8K099 624 aa11.07□□□□□ -0.64
Trim42-201ENSMUST00000035026 Ccdc6D3YZP9 469 aa11.06□□□□□ -0.64
Trim42-201ENSMUST00000035026 Uspl1Q3ULM6 1089 aa11.06□□□□□ -0.64
Trim42-201ENSMUST00000035026 Asic4Q7TNS7 539 aa11.06□□□□□ -0.64
Trim42-201ENSMUST00000035026 Zcrb1Q9CZ96 217 aaKnown RBP11.06□□□□□ -0.64
Trim42-201ENSMUST00000035026 Nkx2-3P97334 362 aa11.05□□□□□ -0.64
Trim42-201ENSMUST00000035026 Cavin4A2AMM0 362 aa11.04□□□□□ -0.64
Trim42-201ENSMUST00000035026 Snap23O09044 210 aa11.04□□□□□ -0.64
Trim42-201ENSMUST00000035026 Ppfibp2O35711 882 aa11.04□□□□□ -0.64
Trim42-201ENSMUST00000035026 Abcc12Q80WJ6 1366 aa11.04□□□□□ -0.64
Trim42-201ENSMUST00000035026 Ubap1lG3UW59 384 aa11.04□□□□□ -0.64
Trim42-201ENSMUST00000035026 Bsdc1Q80Y55 427 aa11.04□□□□□ -0.64
Trim42-201ENSMUST00000035026 Crb1Q8VHS2 1405 aa11.04□□□□□ -0.64
Trim42-201ENSMUST00000035026 Gm21663A0A0G2JE01 267 aa11.03□□□□□ -0.64
Trim42-201ENSMUST00000035026 Gm7361D3Z6R1 267 aa11.03□□□□□ -0.64
Trim42-201ENSMUST00000035026 5031410I06RikE9Q4E0 267 aa11.03□□□□□ -0.64
Trim42-201ENSMUST00000035026 Gm1979E9QAN3 267 aa11.03□□□□□ -0.64
Trim42-201ENSMUST00000035026 Gm5862K7N5V5 267 aa11.03□□□□□ -0.64
Trim42-201ENSMUST00000035026 Gm10220K7N660 267 aa11.03□□□□□ -0.64
Trim42-201ENSMUST00000035026 C1qtnf12Q8R2Z0 308 aa11.03□□□□□ -0.64
Trim42-201ENSMUST00000035026 1700019A02RikA0A087WPV9 146 aa11.03□□□□□ -0.64
Trim42-201ENSMUST00000035026 GalcP54818 684 aa11.03□□□□□ -0.64
Trim42-201ENSMUST00000035026 Slc5a1Q8C3K6 665 aa11.03□□□□□ -0.64
Trim42-201ENSMUST00000035026 Ints5Q8CHT3 1018 aa11.03□□□□□ -0.64
Trim42-201ENSMUST00000035026 Nsd3Q6P2L6 1439 aa11.03□□□□□ -0.64
Trim42-201ENSMUST00000035026 Fam43bA2AM80 330 aa11.02□□□□□ -0.64
Trim42-201ENSMUST00000035026 Afg3l2Q8JZQ2 802 aaKnown RBP11.02□□□□□ -0.64
Trim42-201ENSMUST00000035026 Arhgap33Q80YF9 1305 aa11.02□□□□□ -0.65
Trim42-201ENSMUST00000035026 Chmp7Q8R1T1 451 aa11.02□□□□□ -0.65
Trim42-201ENSMUST00000035026 Sos1Q62245 1319 aa11.01□□□□□ -0.65
Trim42-201ENSMUST00000035026 ApobrQ8VBT6 942 aa11.01□□□□□ -0.65
Trim42-201ENSMUST00000035026 Sos2Q02384 1333 aa11.01□□□□□ -0.65
Trim42-201ENSMUST00000035026 PtmsQ9D0J8 101 aaKnown RBP11.01□□□□□ -0.65
Trim42-201ENSMUST00000035026 Swt1Q9DBQ9 907 aa11.01□□□□□ -0.65
Trim42-201ENSMUST00000035026 Rps6ka4Q9Z2B9 773 aa11.01□□□□□ -0.65
Trim42-201ENSMUST00000035026 Erbb3Q61526 1339 aa11□□□□□ -0.65
Trim42-201ENSMUST00000035026 Ccnl1Q52KE7 532 aaKnown RBP11□□□□□ -0.65
Trim42-201ENSMUST00000035026 Ppm1eQ80TL0 749 aa11□□□□□ -0.65
Trim42-201ENSMUST00000035026 Rtf1A2AQ19 715 aaKnown RBP10.99□□□□□ -0.65
Trim42-201ENSMUST00000035026 IbspQ61711 324 aa10.99□□□□□ -0.65
Trim42-201ENSMUST00000035026 Dnajc14Q921R4 703 aa10.99□□□□□ -0.65
Trim42-201ENSMUST00000035026 Vars2Q3U2A8 1060 aa10.99□□□□□ -0.65
Trim42-201ENSMUST00000035026 Tiam2Q6ZPF3 1715 aa10.99□□□□□ -0.65
Trim42-201ENSMUST00000035026 Ccdc155Q80VJ8 648 aa10.98□□□□□ -0.65
Trim42-201ENSMUST00000035026 CrbnQ8C7D2 445 aa10.98□□□□□ -0.65
Trim42-201ENSMUST00000035026 Ccdc96Q9CR92 584 aa10.98□□□□□ -0.65
Trim42-201ENSMUST00000035026 Lekr1B2RVN1 116 aa10.97□□□□□ -0.65
Trim42-201ENSMUST00000035026 MafgO54790 162 aa10.97□□□□□ -0.65
Trim42-201ENSMUST00000035026 Hdac6Q9Z2V5 1149 aa10.97□□□□□ -0.65
Trim42-201ENSMUST00000035026 Snapc4Q8BP86 1333 aa10.97□□□□□ -0.65
Trim42-201ENSMUST00000035026 Prim1P20664 417 aa10.97□□□□□ -0.65
Trim42-201ENSMUST00000035026 Stac3Q8BZ71 360 aa10.96□□□□□ -0.65
Trim42-201ENSMUST00000035026 Kiaa0319lQ8K135 1048 aa10.96□□□□□ -0.65
Trim42-201ENSMUST00000035026 Noc3lQ8VI84 807 aaKnown RBP10.96□□□□□ -0.65
Trim42-201ENSMUST00000035026 Kndc1Q0KK55 1742 aa10.96□□□□□ -0.66
Trim42-201ENSMUST00000035026 Apba2P98084 750 aa10.96□□□□□ -0.66
Trim42-201ENSMUST00000035026 Klc3Q91W40 508 aa10.96□□□□□ -0.66
Trim42-201ENSMUST00000035026 Atg3Q9CPX6 314 aa10.96□□□□□ -0.66
Trim42-201ENSMUST00000035026 Arhgap4B1AUY3 965 aa10.95□□□□□ -0.66
Trim42-201ENSMUST00000035026 Ggnbp2Q5SV77 696 aa10.95□□□□□ -0.66
Trim42-201ENSMUST00000035026 AceP09470 1312 aa10.95□□□□□ -0.66
Trim42-201ENSMUST00000035026 Atxn3Q9CVD2 355 aa10.95□□□□□ -0.66
Trim42-201ENSMUST00000035026 Ralbp1Q62172 648 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms