RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 AidaQ8C4Q6 305 aa21.61■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Gadd45bP22339 160 aa21.61■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Snx13Q6PHS6 957 aa21.61■■□□□ 1.05
Ebf3-201ENSMUST00000033378 ImmtQ8CAQ8 757 aaKnown RBP21.61■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Il1rapl2Q9ERS6 686 aa21.61■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Bag3Q9JLV1 577 aaKnown RBP21.61■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Pip4k2aO70172 405 aa21.61■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Limch1Q3UH68 1057 aa21.61■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Krt84Q99M73 603 aa21.61■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Usp25P57080 1055 aa21.6■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Mrps27Q8BK72 415 aaKnown RBP21.6■■□□□ 1.05
Ebf3-201ENSMUST00000033378 TkfcQ8VC30 578 aa21.6■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Rrs1Q9CYH6 365 aaKnown RBP21.6■■□□□ 1.05
Ebf3-201ENSMUST00000033378 PaskQ8CEE6 1383 aa21.6■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Ehmt1Q5DW34 1296 aa21.6■■□□□ 1.05
Ebf3-201ENSMUST00000033378 BC005561E9Q5E2 1589 aa21.6■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Map9Q3TRR0 646 aa21.59■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Crocc2F6XLV1 1638 aa21.59■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Wdr7Q920I9 1489 aa21.59■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Tmx3Q8BXZ1 456 aa21.59■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Tmc2Q8R4P4 888 aa21.59■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Dctn1O08788 1281 aa21.59■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Luzp1Q8R4U7 1068 aaKnown RBP21.59■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Sirt1Q923E4 737 aa21.59■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Slx4ipQ9D7Y9 413 aa21.59■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Bin1O08539 588 aaKnown RBP21.59■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Podxl2Q8CAE9 603 aa21.59■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Znf704Q9ERQ3 566 aa21.59■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Eif4g1Q6NZJ6 1600 aaKnown RBP21.59■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Cct2P80314 535 aaKnown RBP21.58■■□□□ 1.05
Ebf3-201ENSMUST00000033378 EappQ5BU09 281 aa21.58■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Kdm4aQ8BW72 1064 aa21.58■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Rlbp1Q9Z275 317 aa21.58■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Stim1P70302 685 aa21.58■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Nucb1Q02819 459 aaKnown RBP21.58■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Maats1Q8BRC6 783 aa21.58■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Zscan20B2KFW1 1030 aa21.58■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Atf3Q60765 181 aa21.58■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Rnf187Q8BFX1 236 aa21.58■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Pafah1b1P63005 410 aaKnown RBP21.58■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Naip6Q9JIB6 1403 aa21.57■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Prl7d1P04769 244 aa21.57■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Ccne1Q61457 408 aa21.57■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Iqca1Q9CUL5 857 aa21.57■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Lrrcc1Q69ZB0 1026 aa21.57■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Ccdc96Q9CR92 584 aa21.57■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Gm21698A0A087WQP8 267 aa21.57■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Gm21671G3UY31 267 aa21.57■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Chpf2Q3UU43 768 aa21.57■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Fkbp5Q64378 456 aa21.57■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Cep135Q6P5D4 1140 aa21.57■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Ddx58Q6Q899 926 aa21.57■■□□□ 1.04
Ebf3-201ENSMUST00000033378 GpkowQ56A08 488 aa21.56■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Gps2Q921N8 327 aa21.56■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Ccdc39Q9D5Y1 937 aa21.56■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Sel1lQ9Z2G6 790 aa21.56■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Stx1aO35526 288 aa21.56■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Ppfia3P60469 1194 aa21.56■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Aldh8a1Q8BH00 487 aa21.56■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Zhx1P70121 873 aa21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Hdgfl1Q2VPR5 283 aa21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Ccdc181Q80ZU5 509 aa21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Tmem67Q8BR76 992 aa21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Gdpd2Q9ESM6 539 aa21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Atf7Q8R0S1 413 aa21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Gm21663A0A0G2JE01 267 aa21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Gm7361D3Z6R1 267 aa21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 5031410I06RikE9Q4E0 267 aa21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Gm1979E9QAN3 267 aa21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Gm5862K7N5V5 267 aa21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Gm10220K7N660 267 aa21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Mum1Q6DID5 682 aa21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Ltv1Q6NSQ7 470 aaKnown RBP21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Ccar2Q8VDP4 922 aaKnown RBP21.55■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Speer4bQ9D9F7 267 aa21.54■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Lmbr1Q9JIT0 490 aa21.54■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Ppfia1B2RXQ2 1266 aa21.54■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Tceanc2Q8R2M0 207 aa21.54■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Snw1Q9CSN1 536 aaKnown RBP21.54■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Bloc1s2Q9CWG9 143 aa21.54■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Cep55Q8BT07 462 aa21.54■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Cyp26c1B2RXA7 518 aa21.54■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Vamp4O70480 141 aa21.53■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Ccdc83Q9D4V3 305 aa21.53■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Flad1Q8R123 492 aa21.53■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Arhgef12Q8R4H2 1543 aaKnown RBP21.53■■□□□ 1.04
Ebf3-201ENSMUST00000033378 CalcaP70160 136 aa21.52■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Q3UJC8 639 aa21.52■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Gm42641I6L9G2 585 aa21.52■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Fam83gQ5SWY7 812 aa21.52■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Abcf1Q6P542 837 aaKnown RBP21.52■■□□□ 1.04
Ebf3-201ENSMUST00000033378 AtripQ8BMG1 785 aa21.52■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Ncbp3Q8BZR9 615 aaKnown RBP21.52■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Trim11Q99PQ2 467 aa21.52■■□□□ 1.04
Ebf3-201ENSMUST00000033378 Vps18Q8R307 973 aa21.52■■□□□ 1.03
Ebf3-201ENSMUST00000033378 Cfap157Q0VFX2 523 aa21.51■■□□□ 1.03
Ebf3-201ENSMUST00000033378 Jakmip3Q5DTN8 844 aa21.51■■□□□ 1.03
Ebf3-201ENSMUST00000033378 Wasf1Q8R5H6 559 aa21.51■■□□□ 1.03
Ebf3-201ENSMUST00000033378 LyarQ08288 388 aaKnown RBP21.5■■□□□ 1.03
Ebf3-201ENSMUST00000033378 Tex2Q6ZPJ0 1128 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 80.1 ms