RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Flad1Q8R123 492 aa10.26□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Chmp3Q9CQ10 224 aa10.26□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Ssh1Q76I79 1042 aa10.25□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Q8C5K5 320 aa10.25□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Atg3Q9CPX6 314 aa10.25□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Wdr17E9Q271 1322 aa10.25□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Amotl2Q8K371 772 aa10.25□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Psma5Q9Z2U1 241 aaKnown RBP10.25□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Iffo2Q8R2V2 512 aa10.25□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Dnajc10Q9DC23 793 aa10.25□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Gtf3c3Q3TMP1 882 aa10.25□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Slit3Q9WVB4 1523 aa10.24□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Zc3h13E9Q784 1729 aaKnown RBP10.24□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Rreb1Q3UH06 1700 aaKnown RBP10.24□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Foxp4Q9DBY0 795 aaKnown RBP10.24□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 AppP12023 770 aa10.24□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Irf9Q61179 399 aa10.24□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Cnksr1A2A9K7 700 aa10.24□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Pdia3P27773 505 aaKnown RBP10.24□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Nucb1Q02819 459 aaKnown RBP10.24□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Taf7Q9R1C0 341 aa10.24□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Mrps27Q8BK72 415 aaKnown RBP10.24□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Mcmdc2E9Q956 681 aa10.23□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Cers3Q1A3B0 383 aa10.23□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Tubb6Q922F4 447 aa10.23□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Anapc15P60007 132 aa10.23□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Aplp1Q03157 653 aa10.23□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Dixdc1Q80Y83 711 aa10.23□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Stard3nlQ9DCI3 235 aa10.23□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Bcar3Q9QZK2 820 aa10.23□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Kif24Q6NWW5 1356 aa10.23□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 GnpatP98192 678 aa10.23□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Kcna6Q61923 529 aa10.23□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Smc3Q9CW03 1217 aaKnown RBP10.23□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Abcc12Q80WJ6 1366 aa10.23□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Morc2aQ69ZX6 1030 aa10.22□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Mmp8O70138 465 aa10.22□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Kif4P33174 1231 aa10.22□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Top1mtQ8R4U6 593 aa10.22□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Sipa1l1Q8C0T5 1782 aa10.22□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Kdm4cQ8VCD7 1054 aa10.22□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Atf5O70191 283 aa10.22□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Speer4bQ9D9F7 267 aa10.22□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Stk3Q9JI10 497 aa10.22□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Gm21663A0A0G2JE01 267 aa10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Gm7361D3Z6R1 267 aa10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 5031410I06RikE9Q4E0 267 aa10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Gm1979E9QAN3 267 aa10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Gm5862K7N5V5 267 aa10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Gm10220K7N660 267 aa10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 GckrQ91X44 587 aa10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 NktrP30415 1453 aa10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Tns3Q5SSZ5 1440 aa10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Aifm3Q3TY86 605 aa10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Ddx19aQ61655 478 aaKnown RBP10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Ddrgk1Q80WW9 315 aa10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Rtn4Q99P72 1162 aaKnown RBP10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 LlphQ9D945 130 aaKnown RBP10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Nckap5lQ6GQX2 1323 aa10.21□□□□□ -0.77
Sf3b1-201ENSMUST00000027127 Hap1O35668 628 aa10.21□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 SlkO54988 1233 aa10.21□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Gripap1Q8VD04 806 aa10.21□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 4930407I10RikD3Z5T8 1512 aa10.21□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Jakmip1Q8BVL9 626 aa10.21□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Map3k2Q61083 619 aa10.2□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Q9D9S1 216 aa10.2□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Catsper2A2ARP9 588 aa10.2□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 PplQ9R269 1755 aa10.2□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Abca14E9Q8F8 1683 aa10.2□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Map3k13Q1HKZ5 959 aa10.2□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Ddx58Q6Q899 926 aa10.2□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Nap1l3Q794H2 544 aa10.2□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Neurod6P48986 337 aa10.2□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Mcm4P49717 862 aa10.2□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Strn4P58404 760 aa10.2□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Tmem87bQ8BKU8 555 aa10.2□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Erich6bQ9D4S6 220 aa10.2□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Lmtk3Q5XJV6 1424 aa10.19□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Ankle2Q6P1H6 964 aa10.19□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 ThemisQ8BGW0 636 aa10.19□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Brf1Q8CFK2 676 aa10.19□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Slain2Q8CI08 581 aa10.19□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Tmem2Q5FWI3 1383 aa10.19□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Kif1aP33173 1695 aa10.19□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Pip4k2bQ80XI4 416 aa10.19□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Phf14Q9D4H9 881 aa10.19□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Gm21680A0A0G2JGR8 267 aa10.19□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Ier5O89113 308 aa10.19□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Zap70P43404 618 aa10.19□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Rrp12Q6P5B0 1295 aaKnown RBP10.19□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Zeb2Q9R0G7 1215 aa10.19□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Slc5a1Q8C3K6 665 aa10.18□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 OptnQ8K3K8 584 aa10.18□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Eif4a1P60843 406 aaKnown RBP10.18□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 ImpactO55091 318 aa10.18□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Ift172Q6VH22 1749 aa10.18□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Clstn1Q9EPL2 979 aa10.18□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Atg4a-psA0A0G2JFS9 396 aa10.18□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Pcmtd1P59913 357 aa10.18□□□□□ -0.78
Sf3b1-201ENSMUST00000027127 Rbm27Q5SFM8 1060 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 90.3 ms