Protein–RNA interactions for Protein: Q9Y606

PUS1, tRNA pseudouridine synthase A, humanhuman

Known RBP eCLIP

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUS1Q9Y606 FMC1-205ENST00000488886 432 ntTSL 310.79□□□□□ -0.681e-323■■■■□ 21.8
PUS1Q9Y606 FMC1-203ENST00000481123 460 ntTSL 210.44□□□□□ -0.741e-323■■■■□ 21.8
PUS1Q9Y606 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC10.38□□□□□ -0.751e-323■■■■□ 21.8
PUS1Q9Y606 FMC1-202ENST00000468383 345 ntTSL 310.3□□□□□ -0.761e-323■■■■□ 21.8
PUS1Q9Y606 FMC1-204ENST00000482181 386 ntTSL 29.16□□□□□ -0.941e-323■■■■□ 21.8
PUS1Q9Y606 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.99□□□□□ -1.771e-323■□□□□ 8.2
PUS1Q9Y606 MT-TH-201ENST00000387441 69 ntBASIC0.61□□□□□ -2.311e-323■■■■■ 132.6
PUS1Q9Y606 MT-TF-201ENST00000387314 71 ntBASIC-0.2□□□□□ -2.441e-323■■■□□ 14.8
PUS1Q9Y606 MT-TI-201ENST00000387365 69 ntBASIC-0.81□□□□□ -2.541e-323■■■■■ 240.9
PUS1Q9Y606 MT-TM-201ENST00000387377 68 ntBASIC-1.21□□□□□ -2.61e-323■■■■■ 170.8
PUS1Q9Y606 MT-TG-201ENST00000387429 68 ntBASIC-1.76□□□□□ -2.691e-323■■■■■ 146.1
PUS1Q9Y606 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC10.47□□□□□ -0.731e-84■■■■■ 201
PUS1Q9Y606 MT-TT-201ENST00000387460 66 ntBASIC-0.38□□□□□ -2.471e-78■■■■■ 28.7
PUS1Q9Y606 SGPL1-204ENST00000486993 537 ntTSL 1 (best)15.44■□□□□ 0.064e-60■■■■■ 137.8
PUS1Q9Y606 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.814e-60■■■■■ 137.8
PUS1Q9Y606 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC5.68□□□□□ -1.52e-31■□□□□ 11.1
PUS1Q9Y606 PLXDC1-215ENST00000579190 565 ntTSL 412.42□□□□□ -0.429e-30■■■■□ 22.5
PUS1Q9Y606 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC10.33□□□□□ -0.761e-28■■■■■ 67.8
PUS1Q9Y606 SNORD3B-1-201ENST00000577988 758 ntBASIC10.51□□□□□ -0.731e-26■■■■■ 120
PUS1Q9Y606 SNORD3B-1-202ENST00000617128 218 nt8.51□□□□□ -1.051e-26■■■■■ 120
PUS1Q9Y606 SNORD3B-1-203ENST00000631292 217 nt8.5□□□□□ -1.051e-26■■■■■ 120
PUS1Q9Y606 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.59□□□□□ -2.151e-22■□□□□ 9.8
PUS1Q9Y606 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.385e-20■■■□□ 18.1
PUS1Q9Y606 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.645e-20■■■□□ 18.1
PUS1Q9Y606 SYCP2L-202ENST00000341041 3069 ntTSL 29.71□□□□□ -0.865e-20■■■□□ 18.1
PUS1Q9Y606 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.342e-15■■■■■ 116.3
PUS1Q9Y606 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.29□□□□□ -0.442e-15■■■■■ 116.3
PUS1Q9Y606 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.36□□□□□ -1.875e-14■■□□□ 12
PUS1Q9Y606 ACTB-211ENST00000480301 657 ntTSL 1 (best)15.73■□□□□ 0.113e-13■□□□□ 8.3
PUS1Q9Y606 ACTB-210ENST00000477812 820 ntTSL 215.19■□□□□ 0.023e-13■□□□□ 8.3
PUS1Q9Y606 ACTB-212ENST00000484841 1032 ntTSL 514.88□□□□□ -0.033e-13■□□□□ 8.3
PUS1Q9Y606 ACTB-207ENST00000462494 2245 ntTSL 514.39□□□□□ -0.113e-13■□□□□ 8.3
PUS1Q9Y606 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.123e-13■□□□□ 8.3
PUS1Q9Y606 ACTB-205ENST00000432588 568 ntTSL 411.9□□□□□ -0.53e-13■□□□□ 8.3
PUS1Q9Y606 ACTB-204ENST00000425660 1845 ntTSL 1 (best)11.86□□□□□ -0.513e-13■□□□□ 8.3
PUS1Q9Y606 ACTB-206ENST00000443528 569 ntTSL 411.82□□□□□ -0.523e-13■□□□□ 8.3
PUS1Q9Y606 ACTB-202ENST00000414620 561 ntTSL 411.48□□□□□ -0.573e-13■□□□□ 8.3
PUS1Q9Y606 ACTB-209ENST00000473257 556 ntTSL 38.14□□□□□ -1.113e-13■□□□□ 8.3
PUS1Q9Y606 RNU6-9-201ENST00000384776 107 ntBASIC0.88□□□□□ -2.274e-13■■■□□ 14.7
PUS1Q9Y606 HFM1-204ENST00000448819 540 ntTSL 56.79□□□□□ -1.328e-13■■■□□ 17.8
PUS1Q9Y606 HFM1-208ENST00000488023 1699 ntTSL 52.83□□□□□ -1.968e-13■■■□□ 17.8
PUS1Q9Y606 HFM1-207ENST00000481900 2020 ntTSL 52.19□□□□□ -2.068e-13■■■□□ 17.8
PUS1Q9Y606 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.218e-13■■■□□ 17.8
PUS1Q9Y606 HFM1-202ENST00000427444 672 ntTSL 51.01□□□□□ -2.258e-13■■■□□ 17.8
PUS1Q9Y606 GSE1-204ENST00000411612 872 ntTSL 516.25■□□□□ 0.194e-12■■■■■ 30
PUS1Q9Y606 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.394e-12■■■■■ 30
PUS1Q9Y606 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.444e-12■■■■■ 30
PUS1Q9Y606 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.454e-12■■■■■ 30
PUS1Q9Y606 GSE1-215ENST00000635906 666 ntTSL 39.55□□□□□ -0.884e-12■■■■■ 30
PUS1Q9Y606 AKAP6-202ENST00000553547 2274 ntTSL 27.72□□□□□ -1.172e-11■■■■■ 37.8
PUS1Q9Y606 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.72□□□□□ -1.332e-11■■■■■ 37.8
PUS1Q9Y606 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.67□□□□□ -1.662e-11■■■■■ 37.8
PUS1Q9Y606 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.832e-11■■■■■ 37.8
PUS1Q9Y606 MT-TD-201ENST00000387419 68 ntBASIC-0.92□□□□□ -2.561e-9■■■■■ 44.4
PUS1Q9Y606 NEAT1-202ENST00000501122 22743 ntBASIC4.64□□□□□ -1.671e-9■□□□□ 10.7
PUS1Q9Y606 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC10.47□□□□□ -0.731e-8■■■■■ 37
PUS1Q9Y606 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.91e-8■■■■■ 41.4
PUS1Q9Y606 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.74□□□□□ -1.491e-8■■■■■ 41.4
PUS1Q9Y606 TNKS-203ENST00000517770 574 ntTSL 44.04□□□□□ -1.761e-8■■■■■ 41.4
PUS1Q9Y606 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.462e-8■□□□□ 10.2
PUS1Q9Y606 DGCR8-204ENST00000457069 770 ntTSL 312.09□□□□□ -0.472e-8■□□□□ 10.2
PUS1Q9Y606 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC10.44□□□□□ -0.742e-8■□□□□ 10.2
PUS1Q9Y606 UBA2-210ENST00000607361 754 ntTSL 218.38■□□□□ 0.533e-8■■■■■ 37.8
PUS1Q9Y606 UBA2-203ENST00000586313 1458 ntTSL 215.43■□□□□ 0.063e-8■■■■■ 37.8
PUS1Q9Y606 UBA2-205ENST00000590048 847 ntTSL 311.23□□□□□ -0.613e-8■■■■■ 37.8
PUS1Q9Y606 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.663e-8■■■■■ 37.8
PUS1Q9Y606 UBA2-209ENST00000592841 344 ntTSL 21.65□□□□□ -2.153e-8■■■■■ 37.8
PUS1Q9Y606 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.83□□□□□ -0.359e-8■■■■■ 35.6
PUS1Q9Y606 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.75□□□□□ -0.379e-8■■■■■ 35.6
PUS1Q9Y606 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.93□□□□□ -0.59e-8■■■■■ 35.6
PUS1Q9Y606 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.74□□□□□ -0.539e-8■■■■■ 35.6
PUS1Q9Y606 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.4□□□□□ -0.589e-8■■■■■ 35.6
PUS1Q9Y606 PRKN-207ENST00000479615 904 ntTSL 511.19□□□□□ -0.629e-8■■■■■ 35.6
PUS1Q9Y606 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.639e-8■■■■■ 35.6
PUS1Q9Y606 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.331e-7■■■■□ 20.7
PUS1Q9Y606 MGAT4B-203ENST00000518168 1013 ntTSL 214.23□□□□□ -0.131e-7■■■■□ 20.7
PUS1Q9Y606 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.291e-7■■■■■ 66.3
PUS1Q9Y606 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.071e-7■■■■■ 66.3
PUS1Q9Y606 RPS7-205ENST00000462576 907 ntTSL 1 (best)19.27■□□□□ 0.682e-7■■□□□ 12.6
PUS1Q9Y606 RPS7-209ENST00000491937 987 ntTSL 219.27■□□□□ 0.682e-7■■□□□ 12.6
PUS1Q9Y606 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.772e-7■■□□□ 12.6
PUS1Q9Y606 RPS7-204ENST00000407445 833 ntTSL 2 BASIC7.07□□□□□ -1.282e-7■■□□□ 12.6
PUS1Q9Y606 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.552e-7■■□□□ 12.6
PUS1Q9Y606 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.69■□□□□ 0.263e-7■■■■■ 33.3
PUS1Q9Y606 MIR210HG-202ENST00000528245 659 ntTSL 311.85□□□□□ -0.513e-7■■■■■ 33.3
PUS1Q9Y606 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.78□□□□□ -0.523e-7■■■■■ 33.3
PUS1Q9Y606 MIR210HG-204ENST00000534540 367 ntTSL 210.74□□□□□ -0.693e-7■■■■■ 33.3
PUS1Q9Y606 MIR210-201ENST00000362168 110 ntBASIC7.57□□□□□ -1.23e-7■■■■■ 33.3
PUS1Q9Y606 RPS7-208ENST00000481006 5429 ntTSL 1 (best)14.32□□□□□ -0.123e-7■□□□□ 11.1
PUS1Q9Y606 RPS7-203ENST00000406376 704 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.073e-7■□□□□ 11.1
PUS1Q9Y606 NKTR-204ENST00000445842 560 ntTSL 517.78■□□□□ 0.443e-7■■■■□ 24.9
PUS1Q9Y606 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.42□□□□□ -0.263e-7■■■■□ 24.9
PUS1Q9Y606 NKTR-214ENST00000478488 698 ntTSL 313.19□□□□□ -0.33e-7■■■■□ 24.9
PUS1Q9Y606 NKTR-215ENST00000487466 2335 ntTSL 213.13□□□□□ -0.313e-7■■■■□ 24.9
PUS1Q9Y606 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.713e-7■■■■□ 24.9
PUS1Q9Y606 NCAPG2-201ENST00000356309 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.913e-7■■■■□ 24.9
PUS1Q9Y606 NCAPG2-204ENST00000432615 4134 ntTSL 58.26□□□□□ -1.093e-7■■■■□ 24.9
PUS1Q9Y606 NCAPG2-205ENST00000441982 2926 ntTSL 28.06□□□□□ -1.123e-7■■■■□ 24.9
PUS1Q9Y606 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.273e-7■■■■□ 24.9
PUS1Q9Y606 NKTR-211ENST00000468735 7964 ntTSL 26.29□□□□□ -1.43e-7■■■■□ 24.9
Retrieved 100 of 280 protein–RNA pairs in 14.9 ms