Protein–RNA interactions for Protein: Q9Y221

NIP7, 60S ribosome subunit biogenesis protein NIP7 homolog, humanhuman

Known RBP eCLIP

Length 180 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7Q9Y221 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.526e-6■□□□□ 11.1
NIP7Q9Y221 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.94■■□□□ 1.587e-6■■■■■ 33.4
NIP7Q9Y221 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.38■■□□□ 1.017e-6■■■■■ 33.4
NIP7Q9Y221 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.897e-6■■■■■ 33.4
NIP7Q9Y221 PMF1-206ENST00000606952 1275 ntTSL 1 (best)20.61■□□□□ 0.897e-6■■■■■ 33.4
NIP7Q9Y221 PMF1-205ENST00000497069 837 ntTSL 320.19■□□□□ 0.827e-6■■■■■ 33.4
NIP7Q9Y221 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.467e-6■■■■■ 33.4
NIP7Q9Y221 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC16.89■□□□□ 0.297e-6■■■■■ 33.4
NIP7Q9Y221 PMF1-201ENST00000368273 884 ntTSL 2 BASIC16.8■□□□□ 0.287e-6■■■■■ 33.4
NIP7Q9Y221 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC15.79■□□□□ 0.127e-6■■■■■ 33.4
NIP7Q9Y221 PMF1-204ENST00000466489 933 ntTSL 1 (best)12.61□□□□□ -0.397e-6■■■■■ 33.4
NIP7Q9Y221 ATP2A2-203ENST00000377685 5702 ntTSL 524.52■■□□□ 1.527e-6■■□□□ 13.6
NIP7Q9Y221 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.957e-6■■□□□ 13.6
NIP7Q9Y221 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.457e-6■■□□□ 13.6
NIP7Q9Y221 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.177e-6■■□□□ 13.6
NIP7Q9Y221 ATP2A2-207ENST00000548169 2951 ntTSL 29.36□□□□□ -0.917e-6■■□□□ 13.6
NIP7Q9Y221 MYCBP2-209ENST00000491491 649 ntTSL 529.76■■■□□ 2.358e-6■■■□□ 18.6
NIP7Q9Y221 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.98e-6■■■□□ 18.6
NIP7Q9Y221 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.668e-6■■■□□ 18.6
Retrieved 19 of 1,619 protein–RNA pairs in 28.2 ms