Protein–RNA interactions for Protein: Q969Z0

TBRG4, Protein TBRG4, humanhuman

Known RBP eCLIP

Length 631 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4Q969Z0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.788e-6■□□□□ 8.4
TBRG4Q969Z0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.34■□□□□ 0.538e-6■□□□□ 8.4
TBRG4Q969Z0 NT5C-209ENST00000580758 958 ntTSL 218.2■□□□□ 0.58e-6■□□□□ 8.4
TBRG4Q969Z0 NT5C-205ENST00000578407 720 ntTSL 317.56■□□□□ 0.48e-6■□□□□ 8.4
TBRG4Q969Z0 NT5C-214ENST00000584352 503 ntTSL 217.49■□□□□ 0.398e-6■□□□□ 8.4
TBRG4Q969Z0 NT5C-208ENST00000580423 450 ntTSL 217.1■□□□□ 0.338e-6■□□□□ 8.4
TBRG4Q969Z0 ZDHHC7-202ENST00000344861 2727 ntTSL 1 (best)16.64■□□□□ 0.258e-6■□□□□ 8.4
TBRG4Q969Z0 POLR3E-217ENST00000569757 662 ntTSL 416.17■□□□□ 0.188e-6■□□□□ 8.4
TBRG4Q969Z0 NT5C-212ENST00000582744 921 ntTSL 215.97■□□□□ 0.158e-6■□□□□ 8.4
TBRG4Q969Z0 POLR3E-215ENST00000565551 645 ntTSL 514.95□□□□□ -0.028e-6■□□□□ 8.4
TBRG4Q969Z0 POLR3E-208ENST00000564061 4800 ntTSL 1 (best)12.91□□□□□ -0.348e-6■□□□□ 8.4
TBRG4Q969Z0 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.398e-6■□□□□ 8.4
TBRG4Q969Z0 RNA5SP226-201ENST00000362653 115 ntBASIC7.65□□□□□ -1.188e-6■□□□□ 8.4
TBRG4Q969Z0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.25■□□□□ 0.674e-8■□□□□ 8.4
TBRG4Q969Z0 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.32□□□□□ -1.244e-8■□□□□ 8.4
TBRG4Q969Z0 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.34e-8■□□□□ 8.4
TBRG4Q969Z0 RPL7-205ENST00000431653 563 ntTSL 35.99□□□□□ -1.454e-8■□□□□ 8.4
TBRG4Q969Z0 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.61□□□□□ -1.514e-8■□□□□ 8.4
TBRG4Q969Z0 RPL7-206ENST00000435330 445 ntTSL 33.73□□□□□ -1.814e-8■□□□□ 8.4
TBRG4Q969Z0 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC13.3□□□□□ -0.282e-57■□□□□ 8.4
TBRG4Q969Z0 RHOT2-220ENST00000569197 530 ntTSL 511.54□□□□□ -0.567e-6■□□□□ 8.4
TBRG4Q969Z0 NEAT1_1.1-201ENST00000620348 120 ntBASIC11.24□□□□□ -0.612e-57■□□□□ 8.4
TBRG4Q969Z0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.233e-8■□□□□ 8.4
TBRG4Q969Z0 FADS2-213ENST00000523235 5073 ntTSL 215.02■□□□□ -03e-8■□□□□ 8.4
TBRG4Q969Z0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.83□□□□□ -0.23e-8■□□□□ 8.4
TBRG4Q969Z0 ANKRD17-210ENST00000561029 2717 ntTSL 521.76■■□□□ 1.073e-6■□□□□ 8.3
TBRG4Q969Z0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.48■□□□□ 0.553e-6■□□□□ 8.3
TBRG4Q969Z0 RPS2-211ENST00000531065 1548 ntTSL 526.73■■□□□ 1.872e-35■□□□□ 8.2
TBRG4Q969Z0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.21■■□□□ 1.792e-35■□□□□ 8.2
TBRG4Q969Z0 RPS2-206ENST00000527302 719 ntTSL 325.28■■□□□ 1.642e-35■□□□□ 8.2
TBRG4Q969Z0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.02■■□□□ 1.62e-35■□□□□ 8.2
TBRG4Q969Z0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.69■■□□□ 1.542e-35■□□□□ 8.2
TBRG4Q969Z0 RPS2-205ENST00000527109 1030 ntTSL 1 (best)24.69■■□□□ 1.542e-35■□□□□ 8.2
TBRG4Q969Z0 RPS2-207ENST00000527826 837 ntTSL 1 (best)24.69■■□□□ 1.542e-35■□□□□ 8.2
TBRG4Q969Z0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.522e-35■□□□□ 8.2
TBRG4Q969Z0 RPS2-215ENST00000533872 1114 ntTSL 524.25■■□□□ 1.472e-35■□□□□ 8.2
TBRG4Q969Z0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.69■■□□□ 1.384e-6■□□□□ 8.2
TBRG4Q969Z0 RPS2-208ENST00000527871 1243 ntTSL 1 (best)23.49■■□□□ 1.352e-35■□□□□ 8.2
TBRG4Q969Z0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.34e-6■□□□□ 8.2
TBRG4Q969Z0 RPS2-213ENST00000533161 1186 ntTSL 1 (best)22.99■■□□□ 1.272e-35■□□□□ 8.2
TBRG4Q969Z0 GADD45A-203ENST00000460575 874 ntTSL 222.05■■□□□ 1.124e-6■□□□□ 8.2
TBRG4Q969Z0 STXBP2-210ENST00000595950 552 ntTSL 522■■□□□ 1.114e-6■□□□□ 8.2
TBRG4Q969Z0 GADD45A-204ENST00000484245 688 ntTSL 1 (best)21.17■□□□□ 0.984e-6■□□□□ 8.2
TBRG4Q969Z0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.76■□□□□ 0.914e-6■□□□□ 8.2
TBRG4Q969Z0 RPS2-204ENST00000526908 638 ntTSL 219.65■□□□□ 0.742e-35■□□□□ 8.2
TBRG4Q969Z0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.7■□□□□ 0.584e-6■□□□□ 8.2
TBRG4Q969Z0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.54e-6■□□□□ 8.2
TBRG4Q969Z0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.464e-6■□□□□ 8.2
TBRG4Q969Z0 RPS2-216ENST00000534461 734 ntTSL 217.65■□□□□ 0.422e-35■□□□□ 8.2
TBRG4Q969Z0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.95■□□□□ 0.144e-6■□□□□ 8.2
TBRG4Q969Z0 AC008763.2-201ENST00000598664 537 ntAPPRIS P5 TSL 515.38■□□□□ 0.054e-6■□□□□ 8.2
TBRG4Q969Z0 STXBP2-211ENST00000597068 1785 ntTSL 1 (best)14.86□□□□□ -0.034e-6■□□□□ 8.2
TBRG4Q969Z0 STXBP2-217ENST00000599737 1523 ntTSL 514.55□□□□□ -0.084e-6■□□□□ 8.2
TBRG4Q969Z0 HSPA9-204ENST00000504902 887 ntTSL 514.42□□□□□ -0.14e-6■□□□□ 8.2
TBRG4Q969Z0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.224e-6■□□□□ 8.2
TBRG4Q969Z0 STXBP2-204ENST00000593535 549 ntTSL 412.53□□□□□ -0.44e-6■□□□□ 8.2
TBRG4Q969Z0 RPS2-203ENST00000526586 878 ntTSL 29.07□□□□□ -0.962e-35■□□□□ 8.2
TBRG4Q969Z0 RPS2-212ENST00000532746 931 ntTSL 38.6□□□□□ -1.032e-35■□□□□ 8.2
TBRG4Q969Z0 RPS2-214ENST00000533186 625 ntTSL 38.6□□□□□ -1.032e-35■□□□□ 8.2
TBRG4Q969Z0 SNORA64-201ENST00000384674 134 ntBASIC2.02□□□□□ -2.092e-35■□□□□ 8.2
TBRG4Q969Z0 snoU2-30.2-201ENST00000362805 70 ntBASIC1.22□□□□□ -2.219e-22■□□□□ 8.2
TBRG4Q969Z0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.5■□□□□ 0.074e-10■□□□□ 8.1
TBRG4Q969Z0 SNHG22-202ENST00000615535 421 nt14.62□□□□□ -0.074e-10■□□□□ 8.1
TBRG4Q969Z0 SCARNA17-201ENST00000516183 144 ntBASIC-0.81□□□□□ -2.544e-10■□□□□ 8.1
TBRG4Q969Z0 HFM1-204ENST00000448819 540 ntTSL 58.99□□□□□ -0.971e-6■□□□□ 8.1
TBRG4Q969Z0 HFM1-208ENST00000488023 1699 ntTSL 53.02□□□□□ -1.931e-6■□□□□ 8.1
TBRG4Q969Z0 HFM1-207ENST00000481900 2020 ntTSL 52.49□□□□□ -2.011e-6■□□□□ 8.1
TBRG4Q969Z0 HFM1-202ENST00000427444 672 ntTSL 52.3□□□□□ -2.041e-6■□□□□ 8.1
TBRG4Q969Z0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.191e-6■□□□□ 8.1
Retrieved 69 of 20,769 protein–RNA pairs in 62.5 ms