Protein: Q92900

UPF1, Regulator of nonsense transcripts 1, humanhuman

Known RBP eCLIP

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1Q92900 PHB2-208ENST00000543465 1518 ntTSL 529.85■■■□□ 2.371e-323■□□□□ 8.8
UPF1Q92900 PHB2-213ENST00000546111 858 ntTSL 2 BASIC29.23■■■□□ 2.271e-323■□□□□ 8.8
UPF1Q92900 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC28.25■■■□□ 2.111e-323■□□□□ 8.8
UPF1Q92900 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC27.61■■■□□ 2.011e-323■□□□□ 8.8
UPF1Q92900 PHB2-202ENST00000440277 996 ntTSL 5 BASIC25.54■■□□□ 1.681e-323■□□□□ 8.8
UPF1Q92900 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC25.52■■□□□ 1.681e-323■□□□□ 8.8
UPF1Q92900 SCARNA2-201ENST00000458748 420 ntBASIC25.18■■□□□ 1.621e-323■■■□□ 15
UPF1Q92900 AL356488.2-201ENST00000602755 427 ntBASIC25.18■■□□□ 1.621e-323■■■□□ 15
UPF1Q92900 PHB2-205ENST00000537646 874 ntTSL 523.12■■□□□ 1.291e-323■□□□□ 8.8
UPF1Q92900 SCARNA12-201ENST00000459155 270 ntBASIC19.6■□□□□ 0.731e-323■□□□□ 8.8
UPF1Q92900 TMEM9-210ENST00000495205 971 ntTSL 517.57■□□□□ 0.41e-323■■■■■ 84.9
UPF1Q92900 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC17.1■□□□□ 0.331e-323■■■■■ 164.2
UPF1Q92900 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.311e-323■□□□□ 9.6
UPF1Q92900 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.291e-323■□□□□ 9.6
UPF1Q92900 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.031e-323■□□□□ 9.6
UPF1Q92900 PHB2-212ENST00000545555 309 ntTSL 512.67□□□□□ -0.381e-323■□□□□ 8.8
UPF1Q92900 snoU2-30.2-201ENST00000362805 70 ntBASIC4.39□□□□□ -1.711e-323■□□□□ 9.4
UPF1Q92900 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.692e-267■■■■■ 85.9
UPF1Q92900 ARF1-208ENST00000478336 930 ntTSL 232.87■■■□□ 2.853e-93■■■■■ 111.5
UPF1Q92900 ARF1-203ENST00000470558 820 ntTSL 221.35■■□□□ 1.013e-93■■■■■ 111.5
UPF1Q92900 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.022e-86■□□□□ 8.3
UPF1Q92900 SNORA12-201ENST00000391162 147 ntBASIC4.98□□□□□ -1.612e-86■□□□□ 8.1
UPF1Q92900 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.985e-83■■■■■ 143.6
UPF1Q92900 TMBIM6-219ENST00000549471 484 ntTSL 28.83□□□□□ -12e-75■■■■□ 21.8
UPF1Q92900 PTPA-218ENST00000435132 618 ntTSL 2 BASIC21.2■□□□□ 0.982e-74■■■■■ 123.1
UPF1Q92900 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.066e-72■■■■■ 32.3
UPF1Q92900 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC27.35■■□□□ 1.974e-71■■■■■ 40.8
UPF1Q92900 CALM1-205ENST00000553542 877 ntTSL 5 BASIC27.15■■□□□ 1.944e-71■■■■■ 40.8
UPF1Q92900 AL713998.1-201ENST00000412872 1605 ntTSL 1 (best) BASIC14.14□□□□□ -0.156e-71■□□□□ 9.8
UPF1Q92900 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.391e-69■■■■■ 79.6
UPF1Q92900 CS-202ENST00000542324 1893 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.652e-69■■■□□ 17.4
UPF1Q92900 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.22e-68■■■■■ 40.7
UPF1Q92900 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.891e-66■■■■■ 81.4
UPF1Q92900 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.61e-66■■■■■ 81.4
UPF1Q92900 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.451e-66■■■■■ 81.4
UPF1Q92900 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.221e-66■■■■■ 81.4
UPF1Q92900 ACTG1-214ENST00000576544 1720 ntTSL 516.36■□□□□ 0.211e-66■■■■■ 81.4
UPF1Q92900 ACTG1-212ENST00000576209 1698 ntTSL 1 (best)15.75■□□□□ 0.111e-66■■■■■ 81.4
UPF1Q92900 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.031e-66■■■■■ 81.4
UPF1Q92900 ACTG1-215ENST00000576917 1958 ntTSL 514.45□□□□□ -0.11e-66■■■■■ 81.4
UPF1Q92900 ACTG1-207ENST00000574671 1678 ntTSL 1 (best)14.21□□□□□ -0.131e-66■■■■■ 81.4
UPF1Q92900 PACSIN3-210ENST00000533686 443 ntTSL 321.83■■□□□ 1.093e-66■■■■■ 117.9
UPF1Q92900 METTL7A-204ENST00000550097 1846 ntTSL 518.17■□□□□ 0.53e-63■■■■■ 149.7
UPF1Q92900 METTL7A-202ENST00000547104 1825 ntTSL 1 (best)17.24■□□□□ 0.353e-63■■■■■ 149.7
UPF1Q92900 METTL7A-201ENST00000332160 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.73e-63■■■■■ 149.7
UPF1Q92900 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.873e-63■■■■■ 149.7
UPF1Q92900 MCM4-212ENST00000521151 1125 ntTSL 213.69□□□□□ -0.221e-61■■■■□ 23.6
UPF1Q92900 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC29.46■■■□□ 2.313e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC27.27■■□□□ 1.963e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-228ENST00000584141 564 ntTSL 226.89■■□□□ 1.93e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-224ENST00000581718 574 ntTSL 226.89■■□□□ 1.93e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC25.98■■□□□ 1.753e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-203ENST00000472367 794 ntTSL 325.12■■□□□ 1.613e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-212ENST00000483588 688 ntTSL 323.61■■□□□ 1.373e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-229ENST00000584177 574 ntTSL 423.38■■□□□ 1.333e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC19.83■□□□□ 0.773e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC19.83■□□□□ 0.773e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC19.47■□□□□ 0.713e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-215ENST00000491009 863 ntTSL 219.26■□□□□ 0.673e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-219ENST00000578757 920 ntTSL 1 (best)18.91■□□□□ 0.623e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-206ENST00000477249 891 ntTSL 518.91■□□□□ 0.623e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC18.82■□□□□ 0.63e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC18.46■□□□□ 0.553e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-217ENST00000497774 1662 ntTSL 516.43■□□□□ 0.223e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-227ENST00000583400 712 ntTSL 416.21■□□□□ 0.193e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-207ENST00000478103 712 ntTSL 315.19■□□□□ 0.023e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-204ENST00000475947 598 ntTSL 215.14■□□□□ 0.013e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-222ENST00000580770 572 ntTSL 415.14■□□□□ 0.013e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-201ENST00000460249 773 ntTSL 315.14■□□□□ 0.013e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC14.27□□□□□ -0.133e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-221ENST00000580180 753 ntTSL 213.97□□□□□ -0.173e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-230ENST00000584926 604 ntTSL 512.61□□□□□ -0.393e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-210ENST00000481898 993 ntTSL 1 (best)12.61□□□□□ -0.393e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC12.11□□□□□ -0.473e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-216ENST00000492250 565 ntTSL 511.66□□□□□ -0.543e-61■□□□□ 9
UPF1Q92900 LRRC75A-AS1-211ENST00000483140 936 ntTSL 26.71□□□□□ -1.343e-61■□□□□ 9
UPF1Q92900 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC20.75■□□□□ 0.915e-59■■■■■ 54.7
UPF1Q92900 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC23.27■■□□□ 1.326e-59■■■■■ 40
UPF1Q92900 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.256e-59■■■■■ 40
UPF1Q92900 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.976e-59■■■■■ 40
UPF1Q92900 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC11.34□□□□□ -0.596e-59■■■■■ 40
UPF1Q92900 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC21.17■□□□□ 0.981e-58■■■■■ 160.2
UPF1Q92900 ENO1-202ENST00000464920 2266 ntTSL 1 (best)15.2■□□□□ 0.026e-58■■■□□ 17.6
UPF1Q92900 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.276e-58■■■□□ 17.6
UPF1Q92900 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC37.1■■■■□ 3.537e-58■■■■■ 73
UPF1Q92900 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.34■□□□□ 0.858e-58■■■■■ 144.8
UPF1Q92900 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.34■□□□□ 0.698e-58■■■■■ 144.8
UPF1Q92900 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.368e-58■■■■■ 144.8
UPF1Q92900 TIMP2-205ENST00000592761 2433 ntTSL 1 (best)15.24■□□□□ 0.031e-57■■■■■ 94.9
UPF1Q92900 MAZ-207ENST00000563012 646 ntTSL 328.91■■■□□ 2.223e-57■■■■□ 20
UPF1Q92900 ORMDL3-205ENST00000581284 561 ntTSL 518.39■□□□□ 0.531e-56■■■■■ 56.7
UPF1Q92900 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.066e-56■■■■■ 71.8
UPF1Q92900 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.916e-56■■■■■ 71.8
UPF1Q92900 ARF1-201ENST00000272102 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.16e-56■■■■■ 71.8
UPF1Q92900 KHSRP-202ENST00000594496 999 ntTSL 227.71■■■□□ 2.039e-56■■■■■ 79.4
UPF1Q92900 TM9SF4-206ENST00000479591 566 ntTSL 214.78□□□□□ -0.042e-54■■■■■ 95.7
UPF1Q92900 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.63e-54■■■■■ 71.8
UPF1Q92900 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.463e-54■■■■■ 71.8
UPF1Q92900 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.56■□□□□ 0.083e-54■■■■□ 25.9
UPF1Q92900 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.17■□□□□ 0.346e-52■■■■■ 58
Retrieved 100 of 15,879 protein–RNA pairs in 57.5 ms