Protein: Q92900

UPF1, Regulator of nonsense transcripts 1, humanhuman

Known RBP eCLIP

Length 1,129 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1Q92900 PHF7-206ENST00000472337 387 ntTSL 58.49□□□□□ -1.054e-6■□□□□ 8.2
UPF1Q92900 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.174e-6■□□□□ 8.2
UPF1Q92900 ZMYM4-203ENST00000457946 6003 ntTSL 56.37□□□□□ -1.394e-6■□□□□ 8.2
UPF1Q92900 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.143e-7■□□□□ 8.2
UPF1Q92900 FN1-225ENST00000494446 676 ntTSL 211.33□□□□□ -0.67e-14■□□□□ 8.2
UPF1Q92900 EIF2S3-203ENST00000457332 215 ntTSL 510.89□□□□□ -0.674e-11■□□□□ 8.1
UPF1Q92900 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.264e-11■□□□□ 8.1
UPF1Q92900 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.057e-8■□□□□ 8.1
UPF1Q92900 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.4□□□□□ -1.547e-8■□□□□ 8.1
UPF1Q92900 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.284e-7■□□□□ 8.1
UPF1Q92900 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.24e-7■□□□□ 8.1
UPF1Q92900 IDH3B-209ENST00000488299 1620 ntTSL 222.24■■□□□ 1.154e-7■□□□□ 8.1
UPF1Q92900 IDH3B-207ENST00000477689 608 ntTSL 522.17■■□□□ 1.144e-7■□□□□ 8.1
UPF1Q92900 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.054e-7■□□□□ 8.1
UPF1Q92900 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC17.67■□□□□ 0.424e-7■□□□□ 8.1
UPF1Q92900 IDH3B-211ENST00000492240 964 ntTSL 517.33■□□□□ 0.364e-7■□□□□ 8.1
UPF1Q92900 IDH3B-204ENST00000466494 677 ntTSL 216.34■□□□□ 0.214e-7■□□□□ 8.1
UPF1Q92900 ALDH3A2-211ENST00000573565 577 ntTSL 412.78□□□□□ -0.364e-7■□□□□ 8.1
UPF1Q92900 ALDH3A2-214ENST00000574597 528 ntTSL 412.2□□□□□ -0.464e-7■□□□□ 8.1
UPF1Q92900 PSAT1-202ENST00000376588 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.464e-7■□□□□ 8.1
UPF1Q92900 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC11.78□□□□□ -0.524e-7■□□□□ 8.1
UPF1Q92900 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.041e-9■□□□□ 8.1
UPF1Q92900 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.071e-9■□□□□ 8.1
UPF1Q92900 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.151e-26■□□□□ 8.1
UPF1Q92900 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.361e-26■□□□□ 8.1
UPF1Q92900 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC6.59□□□□□ -1.351e-26■□□□□ 8.1
UPF1Q92900 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.258e-13■□□□□ 8.1
UPF1Q92900 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.138e-13■□□□□ 8.1
UPF1Q92900 SNORA12-201ENST00000391162 147 ntBASIC4.98□□□□□ -1.612e-86■□□□□ 8.1
UPF1Q92900 SLC25A37-201ENST00000290075 1889 ntTSL 1 (best)25.97■■□□□ 1.753e-20■□□□□ 8.1
UPF1Q92900 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.053e-20■□□□□ 8.1
UPF1Q92900 SLC25A37-204ENST00000518881 3404 ntTSL 1 (best)14.61□□□□□ -0.073e-20■□□□□ 8.1
UPF1Q92900 SLC25A37-211ENST00000523883 3651 ntTSL 29.85□□□□□ -0.833e-20■□□□□ 8.1
UPF1Q92900 TRRAP-203ENST00000417523 550 ntTSL 425.41■■□□□ 1.662e-7■□□□□ 8.1
UPF1Q92900 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.232e-7■□□□□ 8.1
UPF1Q92900 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.252e-7■□□□□ 8.1
UPF1Q92900 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.282e-7■□□□□ 8.1
UPF1Q92900 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.452e-7■□□□□ 8.1
UPF1Q92900 AL020996.2-201ENST00000559265 568 ntTSL 427.44■■□□□ 1.985e-8■□□□□ 8.1
UPF1Q92900 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.115e-8■□□□□ 8.1
UPF1Q92900 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.035e-8■□□□□ 8.1
UPF1Q92900 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.175e-8■□□□□ 8.1
UPF1Q92900 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.175e-8■□□□□ 8.1
UPF1Q92900 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC11.23□□□□□ -0.615e-8■□□□□ 8.1
UPF1Q92900 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.765e-8■□□□□ 8.1
UPF1Q92900 AC024940.5-201ENST00000622889 474 ntBASIC9.51□□□□□ -0.895e-8■□□□□ 8.1
UPF1Q92900 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.025e-10■□□□□ 8.1
UPF1Q92900 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.851e-15■□□□□ 8
UPF1Q92900 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.861e-46■□□□□ 8
UPF1Q92900 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.351e-46■□□□□ 8
UPF1Q92900 HNRNPA3-205ENST00000483137 627 ntTSL 213.23□□□□□ -0.291e-46■□□□□ 8
UPF1Q92900 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC30.92■■■□□ 2.541e-6■□□□□ 8
UPF1Q92900 ECHDC1-216ENST00000479525 1368 ntTSL 525.39■■□□□ 1.651e-6■□□□□ 8
UPF1Q92900 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC23.52■■□□□ 1.361e-6■□□□□ 8
UPF1Q92900 AZI2-203ENST00000414162 1061 ntTSL 322.36■■□□□ 1.171e-6■□□□□ 8
UPF1Q92900 AZI2-209ENST00000463512 1485 ntTSL 1 (best)18.54■□□□□ 0.561e-6■□□□□ 8
UPF1Q92900 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.371e-6■□□□□ 8
UPF1Q92900 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.32■□□□□ 0.21e-6■□□□□ 8
UPF1Q92900 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.21e-6■□□□□ 8
UPF1Q92900 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.73■□□□□ 0.111e-6■□□□□ 8
UPF1Q92900 AZI2-207ENST00000457172 1136 ntTSL 5 BASIC12.94□□□□□ -0.341e-6■□□□□ 8
UPF1Q92900 AZI2-202ENST00000334100 943 ntTSL 3 BASIC12.93□□□□□ -0.341e-6■□□□□ 8
UPF1Q92900 ECHDC1-209ENST00000454591 1515 ntTSL 2 BASIC12.78□□□□□ -0.361e-6■□□□□ 8
UPF1Q92900 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.471e-6■□□□□ 8
UPF1Q92900 AZI2-212ENST00000479665 4706 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.651e-6■□□□□ 8
UPF1Q92900 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC10.58□□□□□ -0.721e-6■□□□□ 8
UPF1Q92900 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC10.46□□□□□ -0.731e-6■□□□□ 8
UPF1Q92900 ECHDC1-206ENST00000417628 767 ntTSL 59.61□□□□□ -0.871e-6■□□□□ 8
UPF1Q92900 AZI2-208ENST00000462936 283 ntTSL 58.88□□□□□ -0.991e-6■□□□□ 8
UPF1Q92900 ECHDC1-215ENST00000475319 1543 ntTSL 28.75□□□□□ -1.011e-6■□□□□ 8
UPF1Q92900 PDAP1-203ENST00000488214 274 ntTSL 38.36□□□□□ -1.071e-6■□□□□ 8
UPF1Q92900 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.151e-6■□□□□ 8
UPF1Q92900 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.181e-6■□□□□ 8
UPF1Q92900 AZI2-201ENST00000295748 3127 ntTSL 1 (best)7.56□□□□□ -1.21e-6■□□□□ 8
UPF1Q92900 AZI2-204ENST00000415852 608 ntTSL 37.3□□□□□ -1.241e-6■□□□□ 8
UPF1Q92900 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.311e-6■□□□□ 8
UPF1Q92900 ECHDC1-205ENST00000368295 1966 ntTSL 55.8□□□□□ -1.481e-6■□□□□ 8
UPF1Q92900 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.51e-6■□□□□ 8
UPF1Q92900 NDE1-209ENST00000574109 843 ntTSL 317.71■□□□□ 0.433e-10■□□□□ 8
Retrieved 79 of 15,879 protein–RNA pairs in 461.7 ms