Protein–RNA interactions for Protein: Q8C4X2

Csnk1g3, Casein kinase I isoform gamma-3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1g3Q8C4X2 Gm25239-201ENSMUST00000174915 86 ntBASIC41.65■■■■■ 4.26
Csnk1g3Q8C4X2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
Csnk1g3Q8C4X2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
Csnk1g3Q8C4X2 Gm15042-201ENSMUST00000120212 883 ntBASIC36.29■■■■□ 3.4
Csnk1g3Q8C4X2 Gm24109-201ENSMUST00000175489 103 ntBASIC36.14■■■■□ 3.38
Csnk1g3Q8C4X2 Gm15045-201ENSMUST00000117359 883 ntBASIC35.48■■■■□ 3.27
Csnk1g3Q8C4X2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Csnk1g3Q8C4X2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.19■■■■□ 3.22
Csnk1g3Q8C4X2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
Csnk1g3Q8C4X2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Csnk1g3Q8C4X2 Gm23366-201ENSMUST00000175022 89 ntBASIC34.78■■■■□ 3.16
Csnk1g3Q8C4X2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Csnk1g3Q8C4X2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Csnk1g3Q8C4X2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.94■■■■□ 3.02
Csnk1g3Q8C4X2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Csnk1g3Q8C4X2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.72■■■□□ 2.99
Csnk1g3Q8C4X2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.57■■■□□ 2.96
Csnk1g3Q8C4X2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.47■■■□□ 2.95
Csnk1g3Q8C4X2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.38■■■□□ 2.93
Csnk1g3Q8C4X2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
Csnk1g3Q8C4X2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Csnk1g3Q8C4X2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.28■■■□□ 2.92
Csnk1g3Q8C4X2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Csnk1g3Q8C4X2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Csnk1g3Q8C4X2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Csnk1g3Q8C4X2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Csnk1g3Q8C4X2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Csnk1g3Q8C4X2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.92■■■□□ 2.86
Csnk1g3Q8C4X2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Csnk1g3Q8C4X2 Gm25238-201ENSMUST00000174914 89 ntBASIC32.91■■■□□ 2.86
Csnk1g3Q8C4X2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
Csnk1g3Q8C4X2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
Csnk1g3Q8C4X2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.66■■■□□ 2.82
Csnk1g3Q8C4X2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Csnk1g3Q8C4X2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Csnk1g3Q8C4X2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.32■■■□□ 2.76
Csnk1g3Q8C4X2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Csnk1g3Q8C4X2 Psd-208ENSMUST00000224556 2034 ntBASIC32.1■■■□□ 2.73
Csnk1g3Q8C4X2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.05■■■□□ 2.72
Csnk1g3Q8C4X2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Csnk1g3Q8C4X2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Csnk1g3Q8C4X2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.99■■■□□ 2.71
Csnk1g3Q8C4X2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.7
Csnk1g3Q8C4X2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.94■■■□□ 2.7
Csnk1g3Q8C4X2 Gm27325-201ENSMUST00000175467 74 ntBASIC31.81■■■□□ 2.68
Csnk1g3Q8C4X2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.68■■■□□ 2.66
Csnk1g3Q8C4X2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Csnk1g3Q8C4X2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Csnk1g3Q8C4X2 Gm25262-201ENSMUST00000174934 133 ntBASIC31.59■■■□□ 2.65
Csnk1g3Q8C4X2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Csnk1g3Q8C4X2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.42■■■□□ 2.62
Csnk1g3Q8C4X2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Csnk1g3Q8C4X2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Csnk1g3Q8C4X2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Csnk1g3Q8C4X2 Rab21-202ENSMUST00000218831 843 ntBASIC31.3■■■□□ 2.6
Csnk1g3Q8C4X2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.24■■■□□ 2.59
Csnk1g3Q8C4X2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.22■■■□□ 2.59
Csnk1g3Q8C4X2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.15■■■□□ 2.58
Csnk1g3Q8C4X2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.13■■■□□ 2.57
Csnk1g3Q8C4X2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Csnk1g3Q8C4X2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Csnk1g3Q8C4X2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Csnk1g3Q8C4X2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.97■■■□□ 2.55
Csnk1g3Q8C4X2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
Csnk1g3Q8C4X2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Csnk1g3Q8C4X2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Csnk1g3Q8C4X2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.9■■■□□ 2.54
Csnk1g3Q8C4X2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Csnk1g3Q8C4X2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Csnk1g3Q8C4X2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.85■■■□□ 2.53
Csnk1g3Q8C4X2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.84■■■□□ 2.53
Csnk1g3Q8C4X2 Gm26115-201ENSMUST00000175605 87 ntBASIC30.84■■■□□ 2.53
Csnk1g3Q8C4X2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Csnk1g3Q8C4X2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Csnk1g3Q8C4X2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Csnk1g3Q8C4X2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Csnk1g3Q8C4X2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Csnk1g3Q8C4X2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Csnk1g3Q8C4X2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Csnk1g3Q8C4X2 Gm8109-201ENSMUST00000194076 746 ntBASIC30.63■■■□□ 2.49
Csnk1g3Q8C4X2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Csnk1g3Q8C4X2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.54■■■□□ 2.48
Csnk1g3Q8C4X2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Csnk1g3Q8C4X2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Csnk1g3Q8C4X2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.48■■■□□ 2.47
Csnk1g3Q8C4X2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Csnk1g3Q8C4X2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Csnk1g3Q8C4X2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.45■■■□□ 2.47
Csnk1g3Q8C4X2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Csnk1g3Q8C4X2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Csnk1g3Q8C4X2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Csnk1g3Q8C4X2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Csnk1g3Q8C4X2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Csnk1g3Q8C4X2 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.33■■■□□ 2.45
Csnk1g3Q8C4X2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.28■■■□□ 2.44
Csnk1g3Q8C4X2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.22■■■□□ 2.43
Csnk1g3Q8C4X2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Csnk1g3Q8C4X2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
Csnk1g3Q8C4X2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Csnk1g3Q8C4X2 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.18■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms