Protein–RNA interactions for Protein: Q4G0J3

LARP7, La-related protein 7, humanhuman

Known RBP eCLIP

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP7Q4G0J3 IGF2BP3-210ENST00000476938 500 ntTSL 215.48■□□□□ 0.076e-6■■□□□ 12.7
LARP7Q4G0J3 IGF2BP3-203ENST00000465058 534 ntTSL 415.34■□□□□ 0.056e-6■■□□□ 12.7
LARP7Q4G0J3 IGF2BP3-211ENST00000479504 559 ntTSL 415.34■□□□□ 0.056e-6■■□□□ 12.7
LARP7Q4G0J3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.15■□□□□ 0.026e-6■■□□□ 12.7
LARP7Q4G0J3 IGF2BP3-204ENST00000466809 588 ntTSL 514.83□□□□□ -0.046e-6■■□□□ 12.7
LARP7Q4G0J3 IGF2BP3-206ENST00000468005 2948 ntTSL 514.37□□□□□ -0.116e-6■■□□□ 12.7
LARP7Q4G0J3 IGF2BP3-202ENST00000421467 2988 ntTSL 510.78□□□□□ -0.686e-6■■□□□ 12.7
LARP7Q4G0J3 COX7C-204ENST00000510447 581 ntTSL 310.48□□□□□ -0.736e-6■■□□□ 12.7
LARP7Q4G0J3 COX7C-201ENST00000247655 666 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.876e-6■■□□□ 12.7
LARP7Q4G0J3 COX7C-207ENST00000515763 347 ntAPPRIS ALT1 TSL 4 BASIC9.6□□□□□ -0.876e-6■■□□□ 12.7
LARP7Q4G0J3 IGF2BP3-208ENST00000469723 556 ntTSL 57.89□□□□□ -1.156e-6■■□□□ 12.7
LARP7Q4G0J3 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.196e-6■■□□□ 12.7
LARP7Q4G0J3 COX7C-206ENST00000513124 693 ntTSL 57.25□□□□□ -1.256e-6■■□□□ 12.7
LARP7Q4G0J3 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.296e-6■■□□□ 12.7
LARP7Q4G0J3 COX7C-202ENST00000505430 496 ntTSL 36.16□□□□□ -1.426e-6■■□□□ 12.7
LARP7Q4G0J3 COX7C-205ENST00000511472 369 ntTSL 26.07□□□□□ -1.446e-6■■□□□ 12.7
LARP7Q4G0J3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.64□□□□□ -2.676e-6■■□□□ 12.7
LARP7Q4G0J3 PHGDH-210ENST00000641115 1638 ntBASIC18.71■□□□□ 0.586e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-209ENST00000641074 1780 ntBASIC17.11■□□□□ 0.336e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.79■□□□□ 0.286e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-211ENST00000641213 2053 nt16.55■□□□□ 0.246e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-232ENST00000641947 1774 nt16.44■□□□□ 0.226e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-229ENST00000641891 2175 nt16.43■□□□□ 0.226e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.42■□□□□ 0.226e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-213ENST00000641272 758 nt16.33■□□□□ 0.26e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-234ENST00000642041 943 nt16.19■□□□□ 0.186e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.76■□□□□ 0.116e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-216ENST00000641375 2196 nt15.58■□□□□ 0.086e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-233ENST00000642021 2794 nt13.98□□□□□ -0.176e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-207ENST00000496756 508 ntTSL 212.64□□□□□ -0.396e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-203ENST00000462324 767 ntTSL 512.61□□□□□ -0.396e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-218ENST00000641491 986 nt12.34□□□□□ -0.436e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-220ENST00000641570 1036 nt12.34□□□□□ -0.436e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-221ENST00000641573 1180 nt12.21□□□□□ -0.456e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-222ENST00000641587 566 nt9.79□□□□□ -0.846e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-212ENST00000641247 710 nt9.57□□□□□ -0.886e-6■■■■□ 21.1
LARP7Q4G0J3 RN7SKP231-201ENST00000363281 277 ntBASIC9.39□□□□□ -0.916e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-215ENST00000641371 725 nt9.21□□□□□ -0.946e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-206ENST00000493622 742 ntTSL 58.55□□□□□ -1.046e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-219ENST00000641513 735 nt8.39□□□□□ -1.076e-6■■■■□ 21.1
LARP7Q4G0J3 PHGDH-225ENST00000641720 548 nt7.16□□□□□ -1.266e-6■■■■□ 21.1
LARP7Q4G0J3 OS9-208ENST00000546916 1028 ntTSL 219.89■□□□□ 0.776e-6■■■□□ 17.8
LARP7Q4G0J3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.266e-6■■■□□ 17.8
LARP7Q4G0J3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.246e-6■■■□□ 17.8
LARP7Q4G0J3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.24■□□□□ 0.196e-6■■■□□ 17.8
LARP7Q4G0J3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.086e-6■■■□□ 17.8
LARP7Q4G0J3 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.086e-6■■■□□ 17.8
LARP7Q4G0J3 FLNA-206ENST00000420627 8225 ntTSL 514.23□□□□□ -0.136e-6■■■□□ 17.8
LARP7Q4G0J3 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.176e-6■■■□□ 17.8
LARP7Q4G0J3 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.226e-6■■■□□ 17.8
LARP7Q4G0J3 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.316e-6■■■□□ 17.8
LARP7Q4G0J3 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC13.09□□□□□ -0.316e-6■■■□□ 17.8
LARP7Q4G0J3 HNRNPU-217ENST00000638952 5678 ntTSL 518.83■□□□□ 0.67e-6■■■■■ 37.6
LARP7Q4G0J3 AHNAK-208ENST00000533365 584 ntAPPRIS ALT2 TSL 518.49■□□□□ 0.557e-6■■■■■ 37.6
LARP7Q4G0J3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.497e-6■■■■■ 37.6
LARP7Q4G0J3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.477e-6■■■■■ 37.6
LARP7Q4G0J3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.417e-6■■■■■ 37.6
LARP7Q4G0J3 ATF5-203ENST00000596658 722 ntTSL 217.56■□□□□ 0.47e-6■■■■■ 37.6
LARP7Q4G0J3 HNRNPU-209ENST00000476241 4844 ntTSL 517.08■□□□□ 0.327e-6■■■■■ 37.6
LARP7Q4G0J3 HNRNPU-228ENST00000640306 2917 ntTSL 516.83■□□□□ 0.287e-6■■■■■ 37.6
LARP7Q4G0J3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.01■□□□□ 0.157e-6■■■■■ 37.6
LARP7Q4G0J3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.127e-6■■■■■ 37.6
LARP7Q4G0J3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.117e-6■■■■■ 37.6
LARP7Q4G0J3 HNRNPU-214ENST00000638475 2698 ntTSL 515.77■□□□□ 0.117e-6■■■■■ 37.6
LARP7Q4G0J3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.87□□□□□ -0.037e-6■■■■■ 37.6
LARP7Q4G0J3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.087e-6■■■■■ 37.6
LARP7Q4G0J3 HNRNPU-229ENST00000640440 871 ntTSL 314.03□□□□□ -0.167e-6■■■■■ 37.6
LARP7Q4G0J3 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.187e-6■■■■■ 37.6
LARP7Q4G0J3 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.197e-6■■■■■ 37.6
LARP7Q4G0J3 PLEKHA7-211ENST00000531066 4561 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.447e-6■■■■■ 37.6
LARP7Q4G0J3 STK3-217ENST00000523960 5333 ntTSL 1 (best)12.01□□□□□ -0.497e-6■■■■■ 37.6
LARP7Q4G0J3 STK3-207ENST00000519420 531 ntTSL 411.9□□□□□ -0.57e-6■■■■■ 37.6
LARP7Q4G0J3 RN7SKP20-201ENST00000362752 313 ntBASIC11.57□□□□□ -0.567e-6■■■■■ 37.6
LARP7Q4G0J3 PLEKHA7-209ENST00000529213 561 ntTSL 411.27□□□□□ -0.617e-6■■■■■ 37.6
LARP7Q4G0J3 HNRNPU-224ENST00000640056 2045 ntTSL 510.28□□□□□ -0.767e-6■■■■■ 37.6
LARP7Q4G0J3 RN7SKP87-201ENST00000364096 301 ntBASIC8.96□□□□□ -0.987e-6■■■■■ 37.6
LARP7Q4G0J3 RN7SKP10-201ENST00000364291 325 ntBASIC8.33□□□□□ -1.087e-6■■■■■ 37.6
LARP7Q4G0J3 RN7SKP85-201ENST00000411349 318 ntBASIC7.54□□□□□ -1.27e-6■■■■■ 37.6
LARP7Q4G0J3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.34□□□□□ -1.47e-6■■■■■ 37.6
LARP7Q4G0J3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.547e-6■■■■■ 37.6
LARP7Q4G0J3 HS6ST1-203ENST00000469019 559 ntTSL 414.48□□□□□ -0.097e-6■□□□□ 9.9
LARP7Q4G0J3 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.327e-6■□□□□ 9.9
LARP7Q4G0J3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.498e-6■□□□□ 9.8
LARP7Q4G0J3 SYMPK-212ENST00000598896 1899 ntTSL 1 (best)21.81■■□□□ 1.088e-6■□□□□ 9.8
LARP7Q4G0J3 SYMPK-208ENST00000598059 611 ntTSL 420.85■□□□□ 0.938e-6■□□□□ 9.8
LARP7Q4G0J3 SYMPK-205ENST00000594293 623 ntTSL 417.3■□□□□ 0.368e-6■□□□□ 9.8
LARP7Q4G0J3 SYMPK-204ENST00000593959 546 ntTSL 416.1■□□□□ 0.178e-6■□□□□ 9.8
LARP7Q4G0J3 SYMPK-202ENST00000593504 5107 ntTSL 215.5■□□□□ 0.078e-6■□□□□ 9.8
LARP7Q4G0J3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.13■□□□□ 0.018e-6■□□□□ 9.8
LARP7Q4G0J3 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.218e-6■□□□□ 9.8
LARP7Q4G0J3 TOP2B-203ENST00000424225 3525 ntTSL 1 (best)13.35□□□□□ -0.278e-6■□□□□ 9.8
LARP7Q4G0J3 H2AFY-214ENST00000508962 293 ntTSL 311.68□□□□□ -0.548e-6■□□□□ 9.8
LARP7Q4G0J3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.488e-6■□□□□ 9.8
LARP7Q4G0J3 OAZ1-208ENST00000592727 726 ntTSL 214.68□□□□□ -0.069e-6■□□□□ 10.3
Retrieved 94 of 2,094 protein–RNA pairs in 45.1 ms