Protein: Q01081

U2AF1, Splicing factor U2AF 35 kDa subunit, humanhuman

Known RBP eCLIP

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1Q01081 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.07■□□□□ 0.961e-323■■□□□ 13.3
U2AF1Q01081 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC17.69■□□□□ 0.421e-323■□□□□ 9
U2AF1Q01081 NEAT1_1.1-201ENST00000620348 120 ntBASIC15.45■□□□□ 0.061e-323■□□□□ 10.3
U2AF1Q01081 NEAT1_3.1-201ENST00000613347 159 ntBASIC14.87□□□□□ -0.031e-323■□□□□ 8
U2AF1Q01081 MALAT1-202ENST00000534336 8708 ntBASIC10.97□□□□□ -0.651e-323■■□□□ 13.9
U2AF1Q01081 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC10.75□□□□□ -0.691e-323■□□□□ 8.3
U2AF1Q01081 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC10.25□□□□□ -0.771e-323■■□□□ 11.8
U2AF1Q01081 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC9.09□□□□□ -0.951e-323■■■□□ 15.7
U2AF1Q01081 HSP90AA1-203ENST00000553585 581 ntTSL 37.77□□□□□ -1.171e-323■■■■■ 32.1
U2AF1Q01081 HSP90AA1-205ENST00000555662 429 ntTSL 26.82□□□□□ -1.321e-323■■■■■ 32.1
U2AF1Q01081 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.28□□□□□ -1.41e-323■■■□□ 14.7
U2AF1Q01081 MALAT1-216ENST00000620465 333 ntTSL 24.61□□□□□ -1.671e-323■■□□□ 11.8
U2AF1Q01081 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.55□□□□□ -1.681e-323■■□□□ 12.3
U2AF1Q01081 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.69□□□□□ -1.981e-323■■■□□ 15.9
U2AF1Q01081 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.66□□□□□ -2.31e-323■□□□□ 10.2
U2AF1Q01081 PGK1-203ENST00000476531 960 ntTSL 213.86□□□□□ -0.195e-66■■■□□ 18.4
U2AF1Q01081 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.31■■■□□ 2.445e-60■■■□□ 16.1
U2AF1Q01081 FUS-203ENST00000474990 827 ntTSL 330.34■■■□□ 2.451e-57■■■■□ 20
U2AF1Q01081 FUS-211ENST00000568901 521 ntTSL 214.01□□□□□ -0.171e-57■■■■□ 20
U2AF1Q01081 SRP54-212ENST00000556992 529 ntTSL 25.77□□□□□ -1.492e-52■■■■■ 92.8
U2AF1Q01081 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.078e-52■□□□□ 8.6
U2AF1Q01081 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.998e-52■□□□□ 8.6
U2AF1Q01081 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.558e-52■□□□□ 8.6
U2AF1Q01081 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC15.57■□□□□ 0.088e-52■□□□□ 8.6
U2AF1Q01081 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.279e-52■□□□□ 10.5
U2AF1Q01081 PABPN1-205ENST00000555295 406 ntTSL 317.18■□□□□ 0.343e-50■■■■□ 19.3
U2AF1Q01081 CCNI-205ENST00000507788 595 ntTSL 422.46■■□□□ 1.191e-48■■□□□ 13
U2AF1Q01081 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.361e-48■■□□□ 13
U2AF1Q01081 HNRNPK-208ENST00000481820 957 ntTSL 27.25□□□□□ -1.253e-43■■■■■ 75.8
U2AF1Q01081 HNRNPK-210ENST00000492865 528 ntTSL 26.11□□□□□ -1.433e-43■■■■■ 75.8
U2AF1Q01081 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC18.66■□□□□ 0.584e-43■□□□□ 10.7
U2AF1Q01081 ACTB-203ENST00000417101 472 ntTSL 429.18■■■□□ 2.268e-43■□□□□ 8.3
U2AF1Q01081 ACTB-213ENST00000493945 1236 ntTSL 519.85■□□□□ 0.778e-43■□□□□ 8.3
U2AF1Q01081 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.07■□□□□ 0.641e-42■■■□□ 14.7
U2AF1Q01081 ACTB-211ENST00000480301 657 ntTSL 1 (best)28.06■■■□□ 2.083e-42■□□□□ 8.5
U2AF1Q01081 ACTB-212ENST00000484841 1032 ntTSL 526.94■■□□□ 1.93e-42■□□□□ 8.5
U2AF1Q01081 ACTB-210ENST00000477812 820 ntTSL 226.66■■□□□ 1.863e-42■□□□□ 8.5
U2AF1Q01081 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.373e-42■□□□□ 8.5
U2AF1Q01081 ACTB-207ENST00000462494 2245 ntTSL 521.9■■□□□ 1.13e-42■□□□□ 8.5
U2AF1Q01081 ACTB-205ENST00000432588 568 ntTSL 421.64■■□□□ 1.053e-42■□□□□ 8.5
U2AF1Q01081 ACTB-206ENST00000443528 569 ntTSL 421.05■□□□□ 0.963e-42■□□□□ 8.5
U2AF1Q01081 ACTB-202ENST00000414620 561 ntTSL 420.82■□□□□ 0.923e-42■□□□□ 8.5
U2AF1Q01081 ACTB-204ENST00000425660 1845 ntTSL 1 (best)20.09■□□□□ 0.813e-42■□□□□ 8.5
U2AF1Q01081 ACTB-209ENST00000473257 556 ntTSL 315.04■□□□□ -03e-42■□□□□ 8.5
U2AF1Q01081 LUC7L3-204ENST00000503798 663 ntTSL 36.03□□□□□ -1.445e-42■■■■■ 73.1
U2AF1Q01081 PNISR-208ENST00000481229 395 ntTSL 35.35□□□□□ -1.552e-41■■■■■ 36.6
U2AF1Q01081 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC23.23■■□□□ 1.312e-37■■■□□ 15.5
U2AF1Q01081 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.762e-37■■■□□ 15.5
U2AF1Q01081 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC19.5■□□□□ 0.712e-37■■■□□ 15.5
U2AF1Q01081 ALAS2-205ENST00000463868 646 ntTSL 318.53■□□□□ 0.562e-37■■■□□ 15.5
U2AF1Q01081 ALAS2-207ENST00000493869 658 ntTSL 218.53■□□□□ 0.562e-37■■■□□ 15.5
U2AF1Q01081 ALAS2-206ENST00000477869 582 ntTSL 515.93■□□□□ 0.142e-37■■■□□ 15.5
U2AF1Q01081 ALAS2-204ENST00000455688 664 ntTSL 28.55□□□□□ -1.042e-37■■■□□ 15.5
U2AF1Q01081 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.243e-37■□□□□ 8.6
U2AF1Q01081 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.213e-37■□□□□ 8.6
U2AF1Q01081 CSTF3-204ENST00000524556 558 ntTSL 319.64■□□□□ 0.738e-37■■■■□ 22.1
U2AF1Q01081 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC19.24■□□□□ 0.678e-37■■■■□ 22.1
U2AF1Q01081 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.48■□□□□ 0.558e-37■■■■□ 22.1
U2AF1Q01081 CSTF3-205ENST00000524775 434 ntTSL 415.58■□□□□ 0.088e-37■■■■□ 22.1
U2AF1Q01081 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC14.72□□□□□ -0.058e-37■■■■□ 22.1
U2AF1Q01081 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.988e-37■■■■□ 22.1
U2AF1Q01081 CSTF3-207ENST00000526480 479 ntTSL 37.94□□□□□ -1.148e-37■■■■□ 22.1
U2AF1Q01081 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC33.3■■■□□ 2.928e-36■■■■■ 31.4
U2AF1Q01081 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC24.72■■□□□ 1.558e-36■■■■■ 31.4
U2AF1Q01081 AGO3-207ENST00000634486 3599 ntTSL 519.46■□□□□ 0.718e-36■■■■■ 31.4
U2AF1Q01081 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC18.08■□□□□ 0.488e-36■■■■■ 31.4
U2AF1Q01081 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.348e-36■■■■■ 31.4
U2AF1Q01081 RBM39-224ENST00000463098 869 ntTSL 219.76■□□□□ 0.752e-33■□□□□ 9.6
U2AF1Q01081 RBM39-222ENST00000461849 861 ntTSL 218.41■□□□□ 0.542e-33■□□□□ 9.6
U2AF1Q01081 RBM3-201ENST00000354480 1884 ntTSL 2 BASIC16.71■□□□□ 0.275e-33■■■□□ 18.6
U2AF1Q01081 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.587e-33■■□□□ 14.3
U2AF1Q01081 SNX5-214ENST00000490175 2025 ntTSL 1 (best)21.01■□□□□ 0.957e-33■■□□□ 14.3
U2AF1Q01081 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.817e-33■■□□□ 14.3
U2AF1Q01081 SNX5-211ENST00000483485 3087 ntTSL 29.75□□□□□ -0.857e-33■■□□□ 14.3
U2AF1Q01081 SNX5-218ENST00000606570 3931 nt8.23□□□□□ -1.097e-33■■□□□ 14.3
U2AF1Q01081 SNX5-215ENST00000491090 819 ntTSL 35.23□□□□□ -1.577e-33■■□□□ 14.3
U2AF1Q01081 SNX5-209ENST00000476648 950 ntTSL 34.65□□□□□ -1.677e-33■■□□□ 14.3
U2AF1Q01081 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.297e-32■■□□□ 13.7
U2AF1Q01081 EIF4A2-223ENST00000494445 629 ntTSL 211.96□□□□□ -0.497e-32■■□□□ 13.7
U2AF1Q01081 EIF4A2-203ENST00000426808 1751 ntTSL 1 (best)9.16□□□□□ -0.947e-32■■□□□ 13.7
U2AF1Q01081 EIF4A2-207ENST00000443963 1729 ntTSL 1 (best)8.99□□□□□ -0.977e-32■■□□□ 13.7
U2AF1Q01081 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.057e-32■■□□□ 13.7
U2AF1Q01081 EIF4A2-225ENST00000496382 460 ntTSL 1 (best)8.45□□□□□ -1.067e-32■■□□□ 13.7
U2AF1Q01081 EIF4A2-204ENST00000429589 1005 ntTSL 58.07□□□□□ -1.127e-32■■□□□ 13.7
U2AF1Q01081 EIF4A2-202ENST00000425053 1977 ntTSL 57.35□□□□□ -1.237e-32■■□□□ 13.7
U2AF1Q01081 EIF4A2-222ENST00000492144 993 ntTSL 27.03□□□□□ -1.287e-32■■□□□ 13.7
U2AF1Q01081 EIF4A2-216ENST00000468362 1356 ntTSL 26.77□□□□□ -1.337e-32■■□□□ 13.7
U2AF1Q01081 EIF4A2-226ENST00000497177 849 ntTSL 56.39□□□□□ -1.397e-32■■□□□ 13.7
U2AF1Q01081 EIF4A2-209ENST00000461021 575 ntTSL 26.19□□□□□ -1.427e-32■■□□□ 13.7
U2AF1Q01081 EIF4A2-219ENST00000485101 5327 ntTSL 55.42□□□□□ -1.547e-32■■□□□ 13.7
U2AF1Q01081 SRRM2-218ENST00000574331 1759 ntTSL 223.1■■□□□ 1.291e-31■■□□□ 11.9
U2AF1Q01081 FDFT1-203ENST00000446331 1558 ntTSL 231.27■■■□□ 2.65e-31■□□□□ 8.6
U2AF1Q01081 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.15e-31■□□□□ 8.6
U2AF1Q01081 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC27.13■■□□□ 1.935e-31■□□□□ 8.6
U2AF1Q01081 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.74■■□□□ 1.875e-31■□□□□ 8.6
U2AF1Q01081 FDFT1-207ENST00000525607 1773 ntTSL 225.21■■□□□ 1.635e-31■□□□□ 8.6
U2AF1Q01081 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.87■■□□□ 1.415e-31■□□□□ 8.6
U2AF1Q01081 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.5■□□□□ 0.875e-31■□□□□ 8.6
U2AF1Q01081 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.695e-31■□□□□ 8.6
U2AF1Q01081 FDFT1-215ENST00000529464 932 ntTSL 1 (best)19.1■□□□□ 0.655e-31■□□□□ 8.6
Retrieved 100 of 10,096 protein–RNA pairs in 43.5 ms