Protein–RNA interactions for Protein: P27796
Retrieved 35 of 35 protein–RNA pairs in 7.5 ms
POT1, 3-ketoacyl-CoA thiolase, peroxisomal, yeast
Known RBP RIP-Chip data
Length 417 aa.
Protein | RNA | Prediction (catRAPID) | Interaction (RIP-Chip) | |||||
---|---|---|---|---|---|---|---|---|
Gene | UniProt Accession | Gene | Ensembl Transcript ID | Length | Transcript Status | Prediction Score | Prediction z-Score | Detected Interaction |
POT1 | P27796 | RPS14B | YJL191W | 417 nt | 10.87 | □□□□□ -0.67 | RIP-Chip | |
POT1 | P27796 | POT1 | YIL160C | 1254 nt | 9.81 | □□□□□ -0.84 | RIP-Chip | |
POT1 | P27796 | RPS6A | YPL090C | 711 nt | 8.69 | □□□□□ -1.02 | RIP-Chip | |
POT1 | P27796 | PAB1 | YER165W | 1734 nt | 7.69 | □□□□□ -1.18 | RIP-Chip | |
POT1 | P27796 | RPL2A | YFR031C-A | 765 nt | 7.55 | □□□□□ -1.2 | RIP-Chip | |
POT1 | P27796 | RPL2B | YIL018W | 765 nt | 7.55 | □□□□□ -1.2 | RIP-Chip | |
POT1 | P27796 | MDH3 | YDL078C | 1032 nt | 6.4 | □□□□□ -1.38 | RIP-Chip | |
POT1 | P27796 | RPS9A | YPL081W | 594 nt | 6.21 | □□□□□ -1.42 | RIP-Chip | |
POT1 | P27796 | TDH3 | YGR192C | 999 nt | 5.82 | □□□□□ -1.48 | RIP-Chip | |
POT1 | P27796 | RBD2 | YPL246C | 789 nt | 5.58 | □□□□□ -1.52 | RIP-Chip | |
POT1 | P27796 | GSP2 | YOR185C | 663 nt | 4.87 | □□□□□ -1.63 | RIP-Chip | |
POT1 | P27796 | CBF5 | YLR175W | 1452 nt | 4.87 | □□□□□ -1.63 | RIP-Chip | |
POT1 | P27796 | RPS4B | YHR203C | 786 nt | 4.78 | □□□□□ -1.64 | RIP-Chip | |
POT1 | P27796 | CPR1 | YDR155C | 489 nt | 4.65 | □□□□□ -1.67 | RIP-Chip | |
POT1 | P27796 | NOP6 | YDL213C | 678 nt | 4.18 | □□□□□ -1.74 | RIP-Chip | |
POT1 | P27796 | ARC15 | YIL062C | 465 nt | 4.07 | □□□□□ -1.76 | RIP-Chip | |
POT1 | P27796 | RPL19B | YBL027W | 570 nt | 4.02 | □□□□□ -1.77 | RIP-Chip | |
POT1 | P27796 | TMA19 | YKL056C | 504 nt | 3.8 | □□□□□ -1.8 | RIP-Chip | |
POT1 | P27796 | RPS9B | YBR189W | 588 nt | 3.53 | □□□□□ -1.84 | RIP-Chip | |
POT1 | P27796 | NIP7 | YPL211W | 546 nt | 3.52 | □□□□□ -1.85 | RIP-Chip | |
POT1 | P27796 | RPL8B | YLL045C | 771 nt | 3.5 | □□□□□ -1.85 | RIP-Chip | |
POT1 | P27796 | RPL13B | YMR142C | 600 nt | 3.44 | □□□□□ -1.86 | RIP-Chip | |
POT1 | P27796 | RPS8A | YBL072C | 603 nt | 3.44 | □□□□□ -1.86 | RIP-Chip | |
POT1 | P27796 | NAB6 | YML117W | 3405 nt | 3.36 | □□□□□ -1.87 | RIP-Chip | |
POT1 | P27796 | GIS2 | YNL255C | 462 nt | 3.21 | □□□□□ -1.9 | RIP-Chip | |
POT1 | P27796 | RPL20B | YOR312C | 519 nt | 2.97 | □□□□□ -1.93 | RIP-Chip | |
POT1 | P27796 | RPL20A | YMR242C | 519 nt | 2.93 | □□□□□ -1.94 | RIP-Chip | |
POT1 | P27796 | RPL16B | YNL069C | 597 nt | 2.76 | □□□□□ -1.97 | RIP-Chip | |
POT1 | P27796 | RPL17B | YJL177W | 555 nt | 2.72 | □□□□□ -1.97 | RIP-Chip | |
POT1 | P27796 | VTC1 | YER072W | 390 nt | 2.7 | □□□□□ -1.98 | RIP-Chip | |
POT1 | P27796 | RPS24A | YER074W | 408 nt | 2.51 | □□□□□ -2.01 | RIP-Chip | |
POT1 | P27796 | RPS16A | YMR143W | 432 nt | 2.45 | □□□□□ -2.02 | RIP-Chip | |
POT1 | P27796 | URA5 | YML106W | 681 nt | 2.07 | □□□□□ -2.08 | RIP-Chip | |
POT1 | P27796 | PHR1 | YOR386W | 1698 nt | 1.48 | □□□□□ -2.17 | RIP-Chip | |
POT1 | P27796 | RPL16A | YIL133C | 600 nt | 1.43 | □□□□□ -2.18 | RIP-Chip |