Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Gm7669-201ENSMUST00000210184 1603 ntBASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uspl1Q3ULM6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Uspl1Q3ULM6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Uspl1Q3ULM6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Uspl1Q3ULM6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Uspl1Q3ULM6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Uspl1Q3ULM6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Uspl1Q3ULM6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.52■□□□□ 0.88
Uspl1Q3ULM6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uspl1Q3ULM6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Uspl1Q3ULM6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Uspl1Q3ULM6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uspl1Q3ULM6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
Uspl1Q3ULM6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Uspl1Q3ULM6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uspl1Q3ULM6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Uspl1Q3ULM6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Uspl1Q3ULM6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Uspl1Q3ULM6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Uspl1Q3ULM6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Uspl1Q3ULM6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Gm4535-201ENSMUST00000182274 558 ntBASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Gm10355-201ENSMUST00000097146 517 ntBASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uspl1Q3ULM6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Gm13418-201ENSMUST00000119097 944 ntBASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uspl1Q3ULM6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms