Protein–RNA interactions for Protein: Q9UK41

VPS28, Vacuolar protein sorting-associated protein 28 homolog, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28Q9UK41 RNA5SP449-201ENST00000516871 130 ntBASIC-4.73□□□□□ -3.17
VPS28Q9UK41 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.75□□□□□ -3.17
VPS28Q9UK41 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.84□□□□□ -3.18
VPS28Q9UK41 RNU4-85P-201ENST00000364675 123 ntBASIC-4.86□□□□□ -3.19
VPS28Q9UK41 MIR363-201ENST00000384840 75 ntBASIC-4.93□□□□□ -3.2
VPS28Q9UK41 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.95□□□□□ -3.2
VPS28Q9UK41 Y_RNA.165-201ENST00000363721 102 ntBASIC-5.06□□□□□ -3.22
VPS28Q9UK41 U6.103-201ENST00000637085 61 ntBASIC-5.13□□□□□ -3.23
VPS28Q9UK41 SNORD111B-201ENST00000408587 80 ntBASIC-5.2□□□□□ -3.24
VPS28Q9UK41 RNU6-916P-201ENST00000516088 109 ntBASIC-5.22□□□□□ -3.25
VPS28Q9UK41 Y_RNA.15-201ENST00000362420 102 ntBASIC-5.25□□□□□ -3.25
VPS28Q9UK41 RNU4-37P-201ENST00000410214 84 ntBASIC-5.3□□□□□ -3.26
VPS28Q9UK41 RNU6-485P-201ENST00000363475 107 ntBASIC-5.38□□□□□ -3.27
VPS28Q9UK41 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.43□□□□□ -3.28
VPS28Q9UK41 RNU6-1091P-201ENST00000363945 107 ntBASIC-5.5□□□□□ -3.29
VPS28Q9UK41 RNU6-627P-201ENST00000364032 102 ntBASIC-5.53□□□□□ -3.29
VPS28Q9UK41 RNU6-620P-201ENST00000384017 96 ntBASIC-5.63□□□□□ -3.31
VPS28Q9UK41 RNU6-133P-201ENST00000383989 107 ntBASIC-5.68□□□□□ -3.32
VPS28Q9UK41 RNU6-724P-201ENST00000390958 105 ntBASIC-5.73□□□□□ -3.33
VPS28Q9UK41 RNU6-894P-201ENST00000517094 105 ntBASIC-6.01□□□□□ -3.37
VPS28Q9UK41 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-6.14□□□□□ -3.39
VPS28Q9UK41 RNY4P19-201ENST00000362530 96 ntBASIC-6.33□□□□□ -3.42
VPS28Q9UK41 MIR548T-201ENST00000408369 74 ntBASIC-6.61□□□□□ -3.47
VPS28Q9UK41 RNU6-892P-201ENST00000410335 99 ntBASIC-6.66□□□□□ -3.48
Retrieved 24 of 98,524 protein–RNA pairs in 6.7 ms