Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.54□□□□□ -2.98
TDP1Q9NUW8 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.63□□□□□ -2.99
TDP1Q9NUW8 MIR509-1-201ENST00000385265 94 ntBASIC-3.63□□□□□ -2.99
TDP1Q9NUW8 MIR509-2-201ENST00000390724 91 ntBASIC-3.63□□□□□ -2.99
TDP1Q9NUW8 RNU6-620P-201ENST00000384017 96 ntBASIC-3.64□□□□□ -2.99
TDP1Q9NUW8 RNU6-894P-201ENST00000517094 105 ntBASIC-3.72□□□□□ -3
TDP1Q9NUW8 RNA5SP106-201ENST00000517274 100 ntBASIC-3.72□□□□□ -3
TDP1Q9NUW8 RNU6-627P-201ENST00000364032 102 ntBASIC-3.74□□□□□ -3.01
TDP1Q9NUW8 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.79□□□□□ -3.02
TDP1Q9NUW8 RNY4P10-201ENST00000365571 96 ntBASIC-3.81□□□□□ -3.02
TDP1Q9NUW8 RNU6-665P-201ENST00000384639 107 ntBASIC-3.93□□□□□ -3.04
TDP1Q9NUW8 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.98□□□□□ -3.05
TDP1Q9NUW8 MIR548T-201ENST00000408369 74 ntBASIC-4.04□□□□□ -3.06
TDP1Q9NUW8 RNU4-85P-201ENST00000364675 123 ntBASIC-4.11□□□□□ -3.07
TDP1Q9NUW8 RNA5SP449-201ENST00000516871 130 ntBASIC-4.16□□□□□ -3.08
TDP1Q9NUW8 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.2□□□□□ -3.08
TDP1Q9NUW8 Y_RNA.165-201ENST00000363721 102 ntBASIC-4.32□□□□□ -3.1
TDP1Q9NUW8 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.65□□□□□ -3.15
TDP1Q9NUW8 RNY4P13-201ENST00000384284 96 ntBASIC-4.66□□□□□ -3.16
TDP1Q9NUW8 MIR363-201ENST00000384840 75 ntBASIC-4.75□□□□□ -3.17
TDP1Q9NUW8 RNU6-916P-201ENST00000516088 109 ntBASIC-4.85□□□□□ -3.19
TDP1Q9NUW8 RNU6-892P-201ENST00000410335 99 ntBASIC-4.9□□□□□ -3.19
TDP1Q9NUW8 Y_RNA.15-201ENST00000362420 102 ntBASIC-5.26□□□□□ -3.25
TDP1Q9NUW8 RNY4P19-201ENST00000362530 96 ntBASIC-5.78□□□□□ -3.33
Retrieved 24 of 98,524 protein–RNA pairs in 400.6 ms