Protein–RNA interactions for Protein: Q9H400

LIME1, Lck-interacting transmembrane adapter 1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1Q9H400 SNORD111B-201ENST00000408587 80 ntBASIC-3.3□□□□□ -2.94
LIME1Q9H400 RNU6-485P-201ENST00000363475 107 ntBASIC-3.39□□□□□ -2.95
LIME1Q9H400 RNU6-665P-201ENST00000384639 107 ntBASIC-3.41□□□□□ -2.96
LIME1Q9H400 RNU6-1091P-201ENST00000363945 107 ntBASIC-3.52□□□□□ -2.97
LIME1Q9H400 RNU4-85P-201ENST00000364675 123 ntBASIC-3.59□□□□□ -2.98
LIME1Q9H400 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.59□□□□□ -2.98
LIME1Q9H400 RNU6-133P-201ENST00000383989 107 ntBASIC-3.62□□□□□ -2.99
LIME1Q9H400 RNU6-724P-201ENST00000390958 105 ntBASIC-3.62□□□□□ -2.99
LIME1Q9H400 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.66□□□□□ -3
LIME1Q9H400 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.69□□□□□ -3
LIME1Q9H400 RNU6-620P-201ENST00000384017 96 ntBASIC-3.71□□□□□ -3
LIME1Q9H400 RNU6-627P-201ENST00000364032 102 ntBASIC-3.73□□□□□ -3.01
LIME1Q9H400 RNA5SP449-201ENST00000516871 130 ntBASIC-3.75□□□□□ -3.01
LIME1Q9H400 RNU6-894P-201ENST00000517094 105 ntBASIC-3.84□□□□□ -3.02
LIME1Q9H400 RNY4P13-201ENST00000384284 96 ntBASIC-3.89□□□□□ -3.03
LIME1Q9H400 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-3.89□□□□□ -3.03
LIME1Q9H400 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.9□□□□□ -3.03
LIME1Q9H400 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.1□□□□□ -3.07
LIME1Q9H400 MIR363-201ENST00000384840 75 ntBASIC-4.12□□□□□ -3.07
LIME1Q9H400 MIR548T-201ENST00000408369 74 ntBASIC-4.23□□□□□ -3.09
LIME1Q9H400 RNU6-916P-201ENST00000516088 109 ntBASIC-4.29□□□□□ -3.1
LIME1Q9H400 Y_RNA.15-201ENST00000362420 102 ntBASIC-4.47□□□□□ -3.13
LIME1Q9H400 RNU6-892P-201ENST00000410335 99 ntBASIC-4.83□□□□□ -3.18
LIME1Q9H400 RNY4P19-201ENST00000362530 96 ntBASIC-5.12□□□□□ -3.23
Retrieved 24 of 98,524 protein–RNA pairs in 230.4 ms