Protein–RNA interactions for Protein: Q99801

NKX3-1, Homeobox protein Nkx-3.1, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1Q99801 MIR509-2-201ENST00000390724 91 ntBASIC-3.38□□□□□ -2.95
NKX3-1Q99801 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.39□□□□□ -2.95
NKX3-1Q99801 RNA5SP106-201ENST00000517274 100 ntBASIC-3.39□□□□□ -2.95
NKX3-1Q99801 RNY4P10-201ENST00000365571 96 ntBASIC-3.46□□□□□ -2.96
NKX3-1Q99801 RNU6-133P-201ENST00000383989 107 ntBASIC-3.51□□□□□ -2.97
NKX3-1Q99801 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.52□□□□□ -2.97
NKX3-1Q99801 RNU6-620P-201ENST00000384017 96 ntBASIC-3.54□□□□□ -2.98
NKX3-1Q99801 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-3.62□□□□□ -2.99
NKX3-1Q99801 RNU6-627P-201ENST00000364032 102 ntBASIC-3.64□□□□□ -2.99
NKX3-1Q99801 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.64□□□□□ -2.99
NKX3-1Q99801 RNU6-894P-201ENST00000517094 105 ntBASIC-3.71□□□□□ -3
NKX3-1Q99801 RNU6-665P-201ENST00000384639 107 ntBASIC-3.75□□□□□ -3.01
NKX3-1Q99801 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.78□□□□□ -3.01
NKX3-1Q99801 RNU4-85P-201ENST00000364675 123 ntBASIC-3.82□□□□□ -3.02
NKX3-1Q99801 RNA5SP449-201ENST00000516871 130 ntBASIC-3.83□□□□□ -3.02
NKX3-1Q99801 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.96□□□□□ -3.04
NKX3-1Q99801 MIR548T-201ENST00000408369 74 ntBASIC-4.04□□□□□ -3.06
NKX3-1Q99801 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.16□□□□□ -3.08
NKX3-1Q99801 RNY4P13-201ENST00000384284 96 ntBASIC-4.28□□□□□ -3.09
NKX3-1Q99801 MIR363-201ENST00000384840 75 ntBASIC-4.48□□□□□ -3.13
NKX3-1Q99801 RNU6-892P-201ENST00000410335 99 ntBASIC-4.57□□□□□ -3.14
NKX3-1Q99801 RNU6-916P-201ENST00000516088 109 ntBASIC-4.59□□□□□ -3.14
NKX3-1Q99801 Y_RNA.15-201ENST00000362420 102 ntBASIC-5□□□□□ -3.21
NKX3-1Q99801 RNY4P19-201ENST00000362530 96 ntBASIC-5.43□□□□□ -3.28
Retrieved 24 of 98,524 protein–RNA pairs in 201.9 ms