Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MIR509-2-201ENST00000390724 91 ntBASIC-2.71□□□□□ -2.84
PTCHD1Q96NR3 MIR548T-201ENST00000408369 74 ntBASIC-2.74□□□□□ -2.85
PTCHD1Q96NR3 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.75□□□□□ -2.85
PTCHD1Q96NR3 RNY4-201ENST00000516507 96 ntBASIC-2.75□□□□□ -2.85
PTCHD1Q96NR3 RNA5SP106-201ENST00000517274 100 ntBASIC-2.75□□□□□ -2.85
PTCHD1Q96NR3 RNU6-627P-201ENST00000364032 102 ntBASIC-2.76□□□□□ -2.85
PTCHD1Q96NR3 RNY4P10-201ENST00000365571 96 ntBASIC-2.8□□□□□ -2.86
PTCHD1Q96NR3 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.87□□□□□ -2.87
PTCHD1Q96NR3 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.88□□□□□ -2.87
PTCHD1Q96NR3 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.88□□□□□ -2.87
PTCHD1Q96NR3 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.89□□□□□ -2.87
PTCHD1Q96NR3 RNU6-665P-201ENST00000384639 107 ntBASIC-2.93□□□□□ -2.88
PTCHD1Q96NR3 RNA5SP449-201ENST00000516871 130 ntBASIC-3.15□□□□□ -2.91
PTCHD1Q96NR3 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.15□□□□□ -2.91
PTCHD1Q96NR3 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.23□□□□□ -2.93
PTCHD1Q96NR3 RNU4-85P-201ENST00000364675 123 ntBASIC-3.26□□□□□ -2.93
PTCHD1Q96NR3 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.38□□□□□ -2.95
PTCHD1Q96NR3 RNY4P13-201ENST00000384284 96 ntBASIC-3.38□□□□□ -2.95
PTCHD1Q96NR3 MIR363-201ENST00000384840 75 ntBASIC-3.59□□□□□ -2.98
PTCHD1Q96NR3 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.65□□□□□ -2.99
PTCHD1Q96NR3 RNU6-892P-201ENST00000410335 99 ntBASIC-3.72□□□□□ -3
PTCHD1Q96NR3 RNU6-916P-201ENST00000516088 109 ntBASIC-3.76□□□□□ -3.01
PTCHD1Q96NR3 Y_RNA.15-201ENST00000362420 102 ntBASIC-3.88□□□□□ -3.03
PTCHD1Q96NR3 RNY4P19-201ENST00000362530 96 ntBASIC-4.37□□□□□ -3.11
Retrieved 24 of 98,524 protein–RNA pairs in 451.4 ms