Protein–RNA interactions for Protein: Q12873

CHD3, Chromodomain-helicase-DNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 2,000 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3Q12873 MIR1302-4-201ENST00000408701 150 ntBASIC-3.14□□□□□ -2.91
CHD3Q12873 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.16□□□□□ -2.92
CHD3Q12873 AC079150.2-201ENST00000443733 78 ntBASIC-3.16□□□□□ -2.92
CHD3Q12873 MIR3668-201ENST00000582138 75 ntBASIC-3.16□□□□□ -2.92
CHD3Q12873 snosnR66.1-201ENST00000391095 99 ntBASIC-3.17□□□□□ -2.92
CHD3Q12873 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.18□□□□□ -2.92
CHD3Q12873 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.18□□□□□ -2.92
CHD3Q12873 RNU6-1091P-201ENST00000363945 107 ntBASIC-3.2□□□□□ -2.92
CHD3Q12873 RNU6-894P-201ENST00000517094 105 ntBASIC-3.2□□□□□ -2.92
CHD3Q12873 RNA5SP170-201ENST00000517150 101 ntBASIC-3.24□□□□□ -2.93
CHD3Q12873 RNU6-133P-201ENST00000383989 107 ntBASIC-3.37□□□□□ -2.95
CHD3Q12873 MTND4LP19-201ENST00000403051 166 ntBASIC-3.41□□□□□ -2.96
CHD3Q12873 AL603908.1-201ENST00000406098 201 ntBASIC-3.44□□□□□ -2.96
CHD3Q12873 U2.22-201ENST00000636441 106 ntBASIC-3.45□□□□□ -2.96
CHD3Q12873 Y_RNA.15-201ENST00000362420 102 ntBASIC-3.51□□□□□ -2.97
CHD3Q12873 RNU6-724P-201ENST00000390958 105 ntBASIC-3.53□□□□□ -2.97
CHD3Q12873 RNU6-892P-201ENST00000410335 99 ntBASIC-3.6□□□□□ -2.98
CHD3Q12873 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-3.61□□□□□ -2.99
CHD3Q12873 MIR548T-201ENST00000408369 74 ntBASIC-3.73□□□□□ -3.01
CHD3Q12873 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-3.76□□□□□ -3.01
CHD3Q12873 RNU4-37P-201ENST00000410214 84 ntBASIC-3.79□□□□□ -3.02
CHD3Q12873 RNY4P19-201ENST00000362530 96 ntBASIC-3.82□□□□□ -3.02
CHD3Q12873 SNORA72.7-201ENST00000516349 94 ntBASIC-3.82□□□□□ -3.02
CHD3Q12873 RNU6-638P-201ENST00000516582 104 ntBASIC-3.82□□□□□ -3.02
Retrieved 24 of 98,524 protein–RNA pairs in 5.3 ms