Protein–RNA interactions for Protein: A6NC98

CCDC88B, Coiled-coil domain-containing protein 88B, humanhuman

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88BA6NC98 RNU6-1011P-201ENST00000384668 107 ntBASIC-8.34□□□□□ -3.74
CCDC88BA6NC98 MIR548M-201ENST00000408260 86 ntBASIC-8.41□□□□□ -3.76
CCDC88BA6NC98 AL606753.1-201ENST00000427435 87 ntBASIC-8.45□□□□□ -3.76
CCDC88BA6NC98 MIR3910-1-201ENST00000580936 111 ntBASIC-8.47□□□□□ -3.77
CCDC88BA6NC98 RNU6-794P-201ENST00000517261 64 ntBASIC-8.48□□□□□ -3.77
CCDC88BA6NC98 RNU6-724P-201ENST00000390958 105 ntBASIC-8.49□□□□□ -3.77
CCDC88BA6NC98 Y_RNA.685-201ENST00000516532 108 ntBASIC-8.61□□□□□ -3.79
CCDC88BA6NC98 RNA5SP170-201ENST00000517150 101 ntBASIC-8.72□□□□□ -3.81
CCDC88BA6NC98 MTND4LP19-201ENST00000403051 166 ntBASIC-8.93□□□□□ -3.84
CCDC88BA6NC98 RNU6-1298P-201ENST00000362456 101 ntBASIC-8.94□□□□□ -3.84
CCDC88BA6NC98 MIR1302-4-201ENST00000408701 150 ntBASIC-8.95□□□□□ -3.84
CCDC88BA6NC98 AP001094.1-201ENST00000579805 193 ntBASIC-8.97□□□□□ -3.85
CCDC88BA6NC98 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-9.01□□□□□ -3.85
CCDC88BA6NC98 MIR3668-201ENST00000582138 75 ntBASIC-9.28□□□□□ -3.89
CCDC88BA6NC98 MT-TR-201ENST00000387439 65 ntBASIC-9.32□□□□□ -3.9
CCDC88BA6NC98 AC099654.10-201ENST00000640395 161 ntBASIC-9.48□□□□□ -3.93
CCDC88BA6NC98 MIR4719-201ENST00000585233 84 ntBASIC-9.52□□□□□ -3.93
CCDC88BA6NC98 RNU6-638P-201ENST00000516582 104 ntBASIC-9.62□□□□□ -3.95
CCDC88BA6NC98 RNU4-37P-201ENST00000410214 84 ntBASIC-9.78□□□□□ -3.97
CCDC88BA6NC98 U2.22-201ENST00000636441 106 ntBASIC-9.91□□□□□ -4
CCDC88BA6NC98 AL603908.1-201ENST00000406098 201 ntBASIC-9.93□□□□□ -4
CCDC88BA6NC98 snosnR66.1-201ENST00000391095 99 ntBASIC-10.11□□□□□ -4.03
CCDC88BA6NC98 SNORA72.7-201ENST00000516349 94 ntBASIC-10.4□□□□□ -4.07
CCDC88BA6NC98 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-10.52□□□□□ -4.09
Retrieved 24 of 98,524 protein–RNA pairs in 5.7 ms