Protein–RNA interactions for Protein: A0A0J9YXS1

NPHP3-ACAD11, NPHP3-ACAD11 readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11A0A0J9YXS1 SNORD114-13-201ENST00000364377 74 ntBASIC-3.03□□□□□ -2.89
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.05□□□□□ -2.9
NPHP3-ACAD11A0A0J9YXS1 MIR509-1-201ENST00000385265 94 ntBASIC-3.08□□□□□ -2.9
NPHP3-ACAD11A0A0J9YXS1 MIR509-2-201ENST00000390724 91 ntBASIC-3.08□□□□□ -2.9
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.14□□□□□ -2.91
NPHP3-ACAD11A0A0J9YXS1 RNA5SP106-201ENST00000517274 100 ntBASIC-3.17□□□□□ -2.92
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.19□□□□□ -2.92
NPHP3-ACAD11A0A0J9YXS1 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.19□□□□□ -2.92
NPHP3-ACAD11A0A0J9YXS1 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.19□□□□□ -2.92
NPHP3-ACAD11A0A0J9YXS1 RNY4P10-201ENST00000365571 96 ntBASIC-3.21□□□□□ -2.92
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.25□□□□□ -2.93
NPHP3-ACAD11A0A0J9YXS1 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.33□□□□□ -2.94
NPHP3-ACAD11A0A0J9YXS1 RNU4-85P-201ENST00000364675 123 ntBASIC-3.45□□□□□ -2.96
NPHP3-ACAD11A0A0J9YXS1 RNU6-665P-201ENST00000384639 107 ntBASIC-3.46□□□□□ -2.96
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.63□□□□□ -2.99
NPHP3-ACAD11A0A0J9YXS1 RNA5SP449-201ENST00000516871 130 ntBASIC-3.63□□□□□ -2.99
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.67□□□□□ -3
NPHP3-ACAD11A0A0J9YXS1 RNU6-892P-201ENST00000410335 99 ntBASIC-3.93□□□□□ -3.04
NPHP3-ACAD11A0A0J9YXS1 RNY4P13-201ENST00000384284 96 ntBASIC-3.95□□□□□ -3.04
NPHP3-ACAD11A0A0J9YXS1 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.12□□□□□ -3.07
NPHP3-ACAD11A0A0J9YXS1 MIR363-201ENST00000384840 75 ntBASIC-4.16□□□□□ -3.08
NPHP3-ACAD11A0A0J9YXS1 RNU6-916P-201ENST00000516088 109 ntBASIC-4.32□□□□□ -3.1
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.15-201ENST00000362420 102 ntBASIC-4.55□□□□□ -3.14
NPHP3-ACAD11A0A0J9YXS1 RNY4P19-201ENST00000362530 96 ntBASIC-5.2□□□□□ -3.24
Retrieved 24 of 98,524 protein–RNA pairs in 3.5 ms