Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RNU6-737P-201ENST00000365370 107 ntBASIC-0.48□□□□□ -2.49
RSPO4Q2I0M5 MIR587-201ENST00000384845 96 ntBASIC-0.48□□□□□ -2.49
RSPO4Q2I0M5 MIR196A1-201ENST00000388006 70 ntBASIC-0.48□□□□□ -2.49
RSPO4Q2I0M5 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.49□□□□□ -2.49
RSPO4Q2I0M5 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.49□□□□□ -2.49
RSPO4Q2I0M5 MIR124-1-201ENST00000385275 85 ntBASIC-0.51□□□□□ -2.49
RSPO4Q2I0M5 SNORD83B-201ENST00000386745 93 ntBASIC-0.55□□□□□ -2.5
RSPO4Q2I0M5 MIR487B-201ENST00000385021 84 ntBASIC-0.56□□□□□ -2.5
RSPO4Q2I0M5 MIR4520-1-201ENST00000582609 70 ntBASIC-0.56□□□□□ -2.5
RSPO4Q2I0M5 RNU6-10P-201ENST00000384036 107 ntBASIC-0.58□□□□□ -2.5
RSPO4Q2I0M5 MIR6738-201ENST00000619620 64 ntBASIC-0.58□□□□□ -2.5
RSPO4Q2I0M5 SNORD114-3-201ENST00000364969 75 ntBASIC-0.59□□□□□ -2.5
RSPO4Q2I0M5 SCARNA17-201ENST00000516183 144 ntBASIC-0.59□□□□□ -2.5
RSPO4Q2I0M5 MIR4324-201ENST00000584846 72 ntBASIC-0.6□□□□□ -2.51
RSPO4Q2I0M5 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.62□□□□□ -2.51
RSPO4Q2I0M5 RNA5SP86-201ENST00000390869 98 ntBASIC-0.64□□□□□ -2.51
RSPO4Q2I0M5 RNA5SP461-201ENST00000516451 104 ntBASIC-0.64□□□□□ -2.51
RSPO4Q2I0M5 MIR548AH-201ENST00000637109 76 ntBASIC-0.65□□□□□ -2.51
RSPO4Q2I0M5 MIR378F-201ENST00000578143 78 ntBASIC-0.66□□□□□ -2.52
RSPO4Q2I0M5 AL731768.1-201ENST00000603124 139 ntBASIC-0.66□□□□□ -2.52
RSPO4Q2I0M5 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.69□□□□□ -2.52
RSPO4Q2I0M5 Y_RNA.137-201ENST00000363455 112 ntBASIC-0.7□□□□□ -2.52
RSPO4Q2I0M5 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.7□□□□□ -2.52
RSPO4Q2I0M5 RNU6-706P-201ENST00000517229 104 ntBASIC-0.7□□□□□ -2.52
RSPO4Q2I0M5 MIR4306-201ENST00000583390 91 ntBASIC-0.71□□□□□ -2.52
RSPO4Q2I0M5 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.73□□□□□ -2.53
RSPO4Q2I0M5 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.75□□□□□ -2.53
RSPO4Q2I0M5 RNU6-892P-201ENST00000410335 99 ntBASIC-0.75□□□□□ -2.53
RSPO4Q2I0M5 MIR3115-201ENST00000577915 68 ntBASIC-0.75□□□□□ -2.53
RSPO4Q2I0M5 MIR365A-201ENST00000362260 87 ntBASIC-0.78□□□□□ -2.53
RSPO4Q2I0M5 MIR4748-201ENST00000578076 82 ntBASIC-0.78□□□□□ -2.53
RSPO4Q2I0M5 MIR5591-201ENST00000578248 65 ntBASIC-0.78□□□□□ -2.53
RSPO4Q2I0M5 MIR4770-201ENST00000579149 58 ntBASIC-0.78□□□□□ -2.53
RSPO4Q2I0M5 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.79□□□□□ -2.54
RSPO4Q2I0M5 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.79□□□□□ -2.54
RSPO4Q2I0M5 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
RSPO4Q2I0M5 SNORD115-45-201ENST00000391078 81 ntBASIC-0.79□□□□□ -2.54
RSPO4Q2I0M5 AC108019.1-201ENST00000512540 175 ntBASIC-0.79□□□□□ -2.54
RSPO4Q2I0M5 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.8□□□□□ -2.54
RSPO4Q2I0M5 MIR1285-2-201ENST00000408311 88 ntBASIC-0.81□□□□□ -2.54
RSPO4Q2I0M5 MIR4756-201ENST00000577874 78 ntBASIC-0.81□□□□□ -2.54
RSPO4Q2I0M5 AL359920.1-201ENST00000618332 176 ntBASIC-0.82□□□□□ -2.54
RSPO4Q2I0M5 RNA5SP180-201ENST00000516181 101 ntBASIC-0.83□□□□□ -2.54
RSPO4Q2I0M5 MIR4441-201ENST00000582623 100 ntBASIC-0.83□□□□□ -2.54
RSPO4Q2I0M5 RNU6-118P-201ENST00000516552 102 ntBASIC-0.84□□□□□ -2.54
RSPO4Q2I0M5 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.85□□□□□ -2.55
RSPO4Q2I0M5 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.86□□□□□ -2.55
RSPO4Q2I0M5 MIR3165-201ENST00000579874 75 ntBASIC-0.86□□□□□ -2.55
RSPO4Q2I0M5 RNY4P27-201ENST00000363341 96 ntBASIC-0.87□□□□□ -2.55
RSPO4Q2I0M5 RNY4P9-201ENST00000363194 97 ntBASIC-0.88□□□□□ -2.55
RSPO4Q2I0M5 HLA-S-202ENST00000425174 53 ntBASIC-0.88□□□□□ -2.55
RSPO4Q2I0M5 RNU6-226P-201ENST00000363778 107 ntBASIC-0.89□□□□□ -2.55
RSPO4Q2I0M5 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.89□□□□□ -2.55
RSPO4Q2I0M5 Y_RNA.612-201ENST00000410717 95 ntBASIC-0.89□□□□□ -2.55
RSPO4Q2I0M5 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.9□□□□□ -2.55
RSPO4Q2I0M5 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.91□□□□□ -2.56
RSPO4Q2I0M5 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.91□□□□□ -2.56
RSPO4Q2I0M5 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.94□□□□□ -2.56
RSPO4Q2I0M5 MIRLET7A3-201ENST00000362116 74 ntBASIC-0.95□□□□□ -2.56
RSPO4Q2I0M5 MIR664B-201ENST00000626756 61 ntBASIC-0.95□□□□□ -2.56
RSPO4Q2I0M5 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.96□□□□□ -2.56
RSPO4Q2I0M5 SNORD18.1-201ENST00000363807 70 ntBASIC-0.98□□□□□ -2.57
RSPO4Q2I0M5 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.98□□□□□ -2.57
RSPO4Q2I0M5 MIR1246-201ENST00000636535 73 ntBASIC-0.99□□□□□ -2.57
RSPO4Q2I0M5 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.01□□□□□ -2.57
RSPO4Q2I0M5 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.01□□□□□ -2.57
RSPO4Q2I0M5 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.02□□□□□ -2.57
RSPO4Q2I0M5 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.02□□□□□ -2.57
RSPO4Q2I0M5 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.03□□□□□ -2.57
RSPO4Q2I0M5 RNU6-194P-201ENST00000363862 105 ntBASIC-1.05□□□□□ -2.58
RSPO4Q2I0M5 RNY4P25-201ENST00000459254 96 ntBASIC-1.05□□□□□ -2.58
RSPO4Q2I0M5 RNA5SP405-201ENST00000363059 114 ntBASIC-1.08□□□□□ -2.58
RSPO4Q2I0M5 RNU4-85P-201ENST00000364675 123 ntBASIC-1.08□□□□□ -2.58
RSPO4Q2I0M5 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.08□□□□□ -2.58
RSPO4Q2I0M5 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.1□□□□□ -2.59
RSPO4Q2I0M5 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.15□□□□□ -2.59
RSPO4Q2I0M5 RNY4P7-201ENST00000364600 96 ntBASIC-1.15□□□□□ -2.59
RSPO4Q2I0M5 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.17□□□□□ -2.6
RSPO4Q2I0M5 MIR5693-201ENST00000577722 73 ntBASIC-1.17□□□□□ -2.6
RSPO4Q2I0M5 MIR496-201ENST00000385226 102 ntBASIC-1.18□□□□□ -2.6
RSPO4Q2I0M5 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.2□□□□□ -2.6
RSPO4Q2I0M5 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.2□□□□□ -2.6
RSPO4Q2I0M5 RNA5SP449-201ENST00000516871 130 ntBASIC-1.21□□□□□ -2.6
RSPO4Q2I0M5 SNORD114-13-201ENST00000364377 74 ntBASIC-1.22□□□□□ -2.6
RSPO4Q2I0M5 RNU6-119P-201ENST00000364882 107 ntBASIC-1.22□□□□□ -2.6
RSPO4Q2I0M5 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.22□□□□□ -2.6
RSPO4Q2I0M5 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.22□□□□□ -2.6
RSPO4Q2I0M5 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.26□□□□□ -2.61
RSPO4Q2I0M5 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.26□□□□□ -2.61
RSPO4Q2I0M5 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.27□□□□□ -2.61
RSPO4Q2I0M5 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.28□□□□□ -2.61
RSPO4Q2I0M5 MIR3139-201ENST00000579145 76 ntBASIC-1.29□□□□□ -2.62
RSPO4Q2I0M5 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.29□□□□□ -2.62
RSPO4Q2I0M5 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.3□□□□□ -2.62
RSPO4Q2I0M5 RNA5SP93-201ENST00000362525 114 ntBASIC-1.34□□□□□ -2.62
RSPO4Q2I0M5 MT-TM-201ENST00000387377 68 ntBASIC-1.35□□□□□ -2.63
RSPO4Q2I0M5 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.35□□□□□ -2.63
RSPO4Q2I0M5 RNU6-230P-201ENST00000362457 104 ntBASIC-1.37□□□□□ -2.63
RSPO4Q2I0M5 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.38□□□□□ -2.63
RSPO4Q2I0M5 RNY4-201ENST00000516507 96 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 275.8 ms