Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 AC108019.1-201ENST00000512540 175 ntBASIC-0.64□□□□□ -2.51
EMP3P54852 MIRLET7A3-201ENST00000362116 74 ntBASIC-0.66□□□□□ -2.52
EMP3P54852 MIR4756-201ENST00000577874 78 ntBASIC-0.66□□□□□ -2.52
EMP3P54852 MIR378F-201ENST00000578143 78 ntBASIC-0.66□□□□□ -2.52
EMP3P54852 Y_RNA.165-201ENST00000363721 102 ntBASIC-0.67□□□□□ -2.52
EMP3P54852 RNU6-118P-201ENST00000516552 102 ntBASIC-0.67□□□□□ -2.52
EMP3P54852 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.68□□□□□ -2.52
EMP3P54852 MIR224-201ENST00000384889 81 ntBASIC-0.69□□□□□ -2.52
EMP3P54852 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.7□□□□□ -2.52
EMP3P54852 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.7□□□□□ -2.52
EMP3P54852 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.71□□□□□ -2.52
EMP3P54852 SNORD114-15-201ENST00000364687 72 ntBASIC-0.72□□□□□ -2.52
EMP3P54852 MIR4306-201ENST00000583390 91 ntBASIC-0.72□□□□□ -2.52
EMP3P54852 RNY4P9-201ENST00000363194 97 ntBASIC-0.73□□□□□ -2.53
EMP3P54852 RNU6-30P-201ENST00000384561 107 ntBASIC-0.73□□□□□ -2.53
EMP3P54852 snoU13.19-201ENST00000459148 104 ntBASIC-0.73□□□□□ -2.53
EMP3P54852 RNA5SP449-201ENST00000516871 130 ntBASIC-0.74□□□□□ -2.53
EMP3P54852 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.76□□□□□ -2.53
EMP3P54852 MIR5591-201ENST00000578248 65 ntBASIC-0.76□□□□□ -2.53
EMP3P54852 MIR4770-201ENST00000579149 58 ntBASIC-0.79□□□□□ -2.54
EMP3P54852 MT-TQ-201ENST00000387372 72 ntBASIC-0.8□□□□□ -2.54
EMP3P54852 RNU4-63P-201ENST00000411313 118 ntBASIC-0.8□□□□□ -2.54
EMP3P54852 MIR548AX-201ENST00000580117 73 ntBASIC-0.82□□□□□ -2.54
EMP3P54852 RNY4P25-201ENST00000459254 96 ntBASIC-0.83□□□□□ -2.54
EMP3P54852 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.83□□□□□ -2.54
EMP3P54852 SCARNA17-201ENST00000516183 144 ntBASIC-0.85□□□□□ -2.55
EMP3P54852 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.86□□□□□ -2.55
EMP3P54852 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.86□□□□□ -2.55
EMP3P54852 MIR664B-201ENST00000626756 61 ntBASIC-0.86□□□□□ -2.55
EMP3P54852 MIR3681-201ENST00000580089 72 ntBASIC-0.9□□□□□ -2.55
EMP3P54852 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.93□□□□□ -2.56
EMP3P54852 HLA-S-202ENST00000425174 53 ntBASIC-0.93□□□□□ -2.56
EMP3P54852 SNORD18.1-201ENST00000363807 70 ntBASIC-0.95□□□□□ -2.56
EMP3P54852 MIR409-201ENST00000362237 79 ntBASIC-0.97□□□□□ -2.56
EMP3P54852 RNU6-194P-201ENST00000363862 105 ntBASIC-0.97□□□□□ -2.56
EMP3P54852 SNORD114-13-201ENST00000364377 74 ntBASIC-0.97□□□□□ -2.56
EMP3P54852 MIR5693-201ENST00000577722 73 ntBASIC-0.97□□□□□ -2.56
EMP3P54852 RNA5SP405-201ENST00000363059 114 ntBASIC-0.99□□□□□ -2.57
EMP3P54852 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.02□□□□□ -2.57
EMP3P54852 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.03□□□□□ -2.57
EMP3P54852 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.05□□□□□ -2.58
EMP3P54852 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.08□□□□□ -2.58
EMP3P54852 RNA5SP266-201ENST00000410273 108 ntBASIC-1.08□□□□□ -2.58
EMP3P54852 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.09□□□□□ -2.58
EMP3P54852 AL627230.5-201ENST00000619807 58 ntBASIC-1.1□□□□□ -2.59
EMP3P54852 RNA5SP331-201ENST00000364986 107 ntBASIC-1.11□□□□□ -2.59
EMP3P54852 RNU6-10P-201ENST00000384036 107 ntBASIC-1.14□□□□□ -2.59
EMP3P54852 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.17□□□□□ -2.6
EMP3P54852 MIR587-201ENST00000384845 96 ntBASIC-1.17□□□□□ -2.6
EMP3P54852 MIR4324-201ENST00000584846 72 ntBASIC-1.18□□□□□ -2.6
EMP3P54852 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.19□□□□□ -2.6
EMP3P54852 MIR3115-201ENST00000577915 68 ntBASIC-1.19□□□□□ -2.6
EMP3P54852 RNU6-230P-201ENST00000362457 104 ntBASIC-1.21□□□□□ -2.6
EMP3P54852 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.23□□□□□ -2.61
EMP3P54852 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.26□□□□□ -2.61
EMP3P54852 MIR6738-201ENST00000619620 64 ntBASIC-1.26□□□□□ -2.61
EMP3P54852 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.28□□□□□ -2.61
EMP3P54852 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.28□□□□□ -2.61
EMP3P54852 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.29□□□□□ -2.62
EMP3P54852 MIR4320-201ENST00000636981 65 ntBASIC-1.3□□□□□ -2.62
EMP3P54852 SNX3P1X-201ENST00000414887 175 ntBASIC-1.32□□□□□ -2.62
EMP3P54852 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.33□□□□□ -2.62
EMP3P54852 RNU6-665P-201ENST00000384639 107 ntBASIC-1.34□□□□□ -2.62
EMP3P54852 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.36□□□□□ -2.63
EMP3P54852 MIR3165-201ENST00000579874 75 ntBASIC-1.36□□□□□ -2.63
EMP3P54852 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.39□□□□□ -2.63
EMP3P54852 MIR198-201ENST00000637333 62 ntBASIC-1.39□□□□□ -2.63
EMP3P54852 MIR3139-201ENST00000579145 76 ntBASIC-1.4□□□□□ -2.63
EMP3P54852 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.41□□□□□ -2.64
EMP3P54852 RNY4P19-201ENST00000362530 96 ntBASIC-1.46□□□□□ -2.64
EMP3P54852 MIR601-201ENST00000385256 79 ntBASIC-1.46□□□□□ -2.64
EMP3P54852 MT-TM-201ENST00000387377 68 ntBASIC-1.51□□□□□ -2.65
EMP3P54852 MIR1246-201ENST00000636535 73 ntBASIC-1.6□□□□□ -2.67
EMP3P54852 RNU6-916P-201ENST00000516088 109 ntBASIC-1.63□□□□□ -2.67
EMP3P54852 MIR4723-201ENST00000585070 81 ntBASIC-1.64□□□□□ -2.67
EMP3P54852 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.65□□□□□ -2.67
EMP3P54852 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.65□□□□□ -2.67
EMP3P54852 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.65□□□□□ -2.67
EMP3P54852 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.65□□□□□ -2.67
EMP3P54852 U4.2-201ENST00000618561 85 ntBASIC-1.67□□□□□ -2.68
EMP3P54852 RNA5SP180-201ENST00000516181 101 ntBASIC-1.68□□□□□ -2.68
EMP3P54852 RNA5SP461-201ENST00000516451 104 ntBASIC-1.68□□□□□ -2.68
EMP3P54852 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.7□□□□□ -2.68
EMP3P54852 MIR365A-201ENST00000362260 87 ntBASIC-1.72□□□□□ -2.68
EMP3P54852 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.72□□□□□ -2.68
EMP3P54852 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.75□□□□□ -2.69
EMP3P54852 MIR1285-2-201ENST00000408311 88 ntBASIC-1.76□□□□□ -2.69
EMP3P54852 MIR4441-201ENST00000582623 100 ntBASIC-1.76□□□□□ -2.69
EMP3P54852 SNORD114-3-201ENST00000364969 75 ntBASIC-1.77□□□□□ -2.69
EMP3P54852 MIR363-201ENST00000384840 75 ntBASIC-1.83□□□□□ -2.7
EMP3P54852 MIR509-1-201ENST00000385265 94 ntBASIC-1.84□□□□□ -2.7
EMP3P54852 MIR509-2-201ENST00000390724 91 ntBASIC-1.84□□□□□ -2.7
EMP3P54852 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.85□□□□□ -2.71
EMP3P54852 MIR1207-201ENST00000408249 87 ntBASIC-1.85□□□□□ -2.71
EMP3P54852 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.93□□□□□ -2.72
EMP3P54852 RNY4P27-201ENST00000363341 96 ntBASIC-1.98□□□□□ -2.73
EMP3P54852 RNY4P10-201ENST00000365571 96 ntBASIC-2□□□□□ -2.73
EMP3P54852 RNA5SP106-201ENST00000517274 100 ntBASIC-2.03□□□□□ -2.73
EMP3P54852 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.05□□□□□ -2.74
EMP3P54852 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.19□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 231.8 ms