Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.91□□□□□ -2.56
EPHB3P54753 SNORD113-3-201ENST00000364830 72 ntBASIC-0.92□□□□□ -2.56
EPHB3P54753 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.95□□□□□ -2.56
EPHB3P54753 RNU6-226P-201ENST00000363778 107 ntBASIC-0.95□□□□□ -2.56
EPHB3P54753 HLA-S-202ENST00000425174 53 ntBASIC-0.95□□□□□ -2.56
EPHB3P54753 MIR548AM-201ENST00000584298 74 ntBASIC-0.95□□□□□ -2.56
EPHB3P54753 RNU6-1091P-201ENST00000363945 107 ntBASIC-0.96□□□□□ -2.56
EPHB3P54753 Y_RNA.406-201ENST00000383984 100 ntBASIC-0.96□□□□□ -2.56
EPHB3P54753 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.97□□□□□ -2.56
EPHB3P54753 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.99□□□□□ -2.57
EPHB3P54753 Y_RNA.684-201ENST00000516510 99 ntBASIC-1□□□□□ -2.57
EPHB3P54753 AC097484.2-201ENST00000509147 251 ntBASIC-1.01□□□□□ -2.57
EPHB3P54753 MIR5591-201ENST00000578248 65 ntBASIC-1.01□□□□□ -2.57
EPHB3P54753 MIR4520-1-201ENST00000582609 70 ntBASIC-1.02□□□□□ -2.57
EPHB3P54753 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.03□□□□□ -2.57
EPHB3P54753 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.03□□□□□ -2.57
EPHB3P54753 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.04□□□□□ -2.58
EPHB3P54753 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.06□□□□□ -2.58
EPHB3P54753 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.06□□□□□ -2.58
EPHB3P54753 MIR4770-201ENST00000579149 58 ntBASIC-1.06□□□□□ -2.58
EPHB3P54753 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.06□□□□□ -2.58
EPHB3P54753 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.06□□□□□ -2.58
EPHB3P54753 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.06□□□□□ -2.58
EPHB3P54753 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.06□□□□□ -2.58
EPHB3P54753 RNA5SP86-201ENST00000390869 98 ntBASIC-1.07□□□□□ -2.58
EPHB3P54753 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.08□□□□□ -2.58
EPHB3P54753 RNU6-983P-201ENST00000516004 103 ntBASIC-1.08□□□□□ -2.58
EPHB3P54753 RNU6-119P-201ENST00000364882 107 ntBASIC-1.1□□□□□ -2.59
EPHB3P54753 MIR487B-201ENST00000385021 84 ntBASIC-1.11□□□□□ -2.59
EPHB3P54753 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.12□□□□□ -2.59
EPHB3P54753 MIR496-201ENST00000385226 102 ntBASIC-1.12□□□□□ -2.59
EPHB3P54753 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.12□□□□□ -2.59
EPHB3P54753 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.15□□□□□ -2.59
EPHB3P54753 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.19□□□□□ -2.6
EPHB3P54753 RNU6-854P-201ENST00000364036 107 ntBASIC-1.19□□□□□ -2.6
EPHB3P54753 SNORD18.1-201ENST00000363807 70 ntBASIC-1.2□□□□□ -2.6
EPHB3P54753 RNY4P7-201ENST00000364600 96 ntBASIC-1.21□□□□□ -2.6
EPHB3P54753 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.22□□□□□ -2.6
EPHB3P54753 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.22□□□□□ -2.6
EPHB3P54753 RNU6-118P-201ENST00000516552 102 ntBASIC-1.23□□□□□ -2.61
EPHB3P54753 SNORD54-201ENST00000459159 67 ntBASIC-1.25□□□□□ -2.61
EPHB3P54753 RNA5SP93-201ENST00000362525 114 ntBASIC-1.28□□□□□ -2.61
EPHB3P54753 AC108019.1-201ENST00000512540 175 ntBASIC-1.29□□□□□ -2.62
EPHB3P54753 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.3□□□□□ -2.62
EPHB3P54753 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.3□□□□□ -2.62
EPHB3P54753 MIR548T-201ENST00000408369 74 ntBASIC-1.31□□□□□ -2.62
EPHB3P54753 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.31□□□□□ -2.62
EPHB3P54753 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.32□□□□□ -2.62
EPHB3P54753 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.33□□□□□ -2.62
EPHB3P54753 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.33□□□□□ -2.62
EPHB3P54753 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.35□□□□□ -2.63
EPHB3P54753 RNU6-422P-201ENST00000384632 107 ntBASIC-1.35□□□□□ -2.63
EPHB3P54753 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.36□□□□□ -2.63
EPHB3P54753 RNY4-201ENST00000516507 96 ntBASIC-1.36□□□□□ -2.63
EPHB3P54753 MIR3139-201ENST00000579145 76 ntBASIC-1.36□□□□□ -2.63
EPHB3P54753 MIR4756-201ENST00000577874 78 ntBASIC-1.37□□□□□ -2.63
EPHB3P54753 MIR4748-201ENST00000578076 82 ntBASIC-1.37□□□□□ -2.63
EPHB3P54753 MIR664B-201ENST00000626756 61 ntBASIC-1.37□□□□□ -2.63
EPHB3P54753 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.4□□□□□ -2.63
EPHB3P54753 MT-TM-201ENST00000387377 68 ntBASIC-1.42□□□□□ -2.64
EPHB3P54753 RNU6-737P-201ENST00000365370 107 ntBASIC-1.43□□□□□ -2.64
EPHB3P54753 AL731768.1-201ENST00000603124 139 ntBASIC-1.43□□□□□ -2.64
EPHB3P54753 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.45□□□□□ -2.64
EPHB3P54753 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.45□□□□□ -2.64
EPHB3P54753 RNA5SP405-201ENST00000363059 114 ntBASIC-1.46□□□□□ -2.64
EPHB3P54753 RNU6-620P-201ENST00000384017 96 ntBASIC-1.46□□□□□ -2.64
EPHB3P54753 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
EPHB3P54753 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.47□□□□□ -2.64
EPHB3P54753 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.47□□□□□ -2.64
EPHB3P54753 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.51□□□□□ -2.65
EPHB3P54753 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.51□□□□□ -2.65
EPHB3P54753 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.51□□□□□ -2.65
EPHB3P54753 MIR124-1-201ENST00000385275 85 ntBASIC-1.52□□□□□ -2.65
EPHB3P54753 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.53□□□□□ -2.65
EPHB3P54753 RNY4P9-201ENST00000363194 97 ntBASIC-1.55□□□□□ -2.66
EPHB3P54753 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.55□□□□□ -2.66
EPHB3P54753 RNU6-194P-201ENST00000363862 105 ntBASIC-1.56□□□□□ -2.66
EPHB3P54753 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.56□□□□□ -2.66
EPHB3P54753 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.58□□□□□ -2.66
EPHB3P54753 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.59□□□□□ -2.66
EPHB3P54753 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.6□□□□□ -2.67
EPHB3P54753 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.62□□□□□ -2.67
EPHB3P54753 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.62□□□□□ -2.67
EPHB3P54753 AL359920.1-201ENST00000618332 176 ntBASIC-1.62□□□□□ -2.67
EPHB3P54753 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.63□□□□□ -2.67
EPHB3P54753 MIR548AH-201ENST00000637109 76 ntBASIC-1.65□□□□□ -2.67
EPHB3P54753 RNU6-627P-201ENST00000364032 102 ntBASIC-1.66□□□□□ -2.68
EPHB3P54753 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.67□□□□□ -2.68
EPHB3P54753 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.69□□□□□ -2.68
EPHB3P54753 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.69□□□□□ -2.68
EPHB3P54753 RNU6-230P-201ENST00000362457 104 ntBASIC-1.73□□□□□ -2.69
EPHB3P54753 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.75□□□□□ -2.69
EPHB3P54753 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.75□□□□□ -2.69
EPHB3P54753 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.75□□□□□ -2.69
EPHB3P54753 SNORD115-45-201ENST00000391078 81 ntBASIC-1.76□□□□□ -2.69
EPHB3P54753 RNU6-803P-201ENST00000516034 102 ntBASIC-1.76□□□□□ -2.69
EPHB3P54753 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.79□□□□□ -2.7
EPHB3P54753 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.81□□□□□ -2.7
EPHB3P54753 RNY4P25-201ENST00000459254 96 ntBASIC-1.82□□□□□ -2.7
EPHB3P54753 MIR5693-201ENST00000577722 73 ntBASIC-1.94□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 290 ms