Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RNU6-737P-201ENST00000365370 107 ntBASIC-0.89□□□□□ -2.55
TRIM38O00635 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.89□□□□□ -2.55
TRIM38O00635 MIR4324-201ENST00000584846 72 ntBASIC-0.89□□□□□ -2.55
TRIM38O00635 Y_RNA.59-201ENST00000362828 102 ntBASIC-0.92□□□□□ -2.56
TRIM38O00635 RNU6-620P-201ENST00000384017 96 ntBASIC-0.92□□□□□ -2.56
TRIM38O00635 MIR124-1-201ENST00000385275 85 ntBASIC-0.92□□□□□ -2.56
TRIM38O00635 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.94□□□□□ -2.56
TRIM38O00635 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
TRIM38O00635 MIR3115-201ENST00000577915 68 ntBASIC-0.94□□□□□ -2.56
TRIM38O00635 MIR4748-201ENST00000578076 82 ntBASIC-0.95□□□□□ -2.56
TRIM38O00635 SNORD18.1-201ENST00000363807 70 ntBASIC-0.96□□□□□ -2.56
TRIM38O00635 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.96□□□□□ -2.56
TRIM38O00635 AL731768.1-201ENST00000603124 139 ntBASIC-0.96□□□□□ -2.56
TRIM38O00635 MIR6738-201ENST00000619620 64 ntBASIC-0.96□□□□□ -2.56
TRIM38O00635 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.97□□□□□ -2.56
TRIM38O00635 RNU6-118P-201ENST00000516552 102 ntBASIC-0.97□□□□□ -2.56
TRIM38O00635 MIR664B-201ENST00000626756 61 ntBASIC-0.98□□□□□ -2.57
TRIM38O00635 Y_RNA.284-201ENST00000364806 102 ntBASIC-1□□□□□ -2.57
TRIM38O00635 RNU6-1161P-201ENST00000516176 102 ntBASIC-1□□□□□ -2.57
TRIM38O00635 MIR548AH-201ENST00000637109 76 ntBASIC-1□□□□□ -2.57
TRIM38O00635 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1□□□□□ -2.57
TRIM38O00635 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.02□□□□□ -2.57
TRIM38O00635 MIR3165-201ENST00000579874 75 ntBASIC-1.02□□□□□ -2.57
TRIM38O00635 RNU6-10P-201ENST00000384036 107 ntBASIC-1.03□□□□□ -2.57
TRIM38O00635 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.03□□□□□ -2.57
TRIM38O00635 SNX3P1X-201ENST00000414887 175 ntBASIC-1.04□□□□□ -2.58
TRIM38O00635 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.06□□□□□ -2.58
TRIM38O00635 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.07□□□□□ -2.58
TRIM38O00635 RNY4P9-201ENST00000363194 97 ntBASIC-1.08□□□□□ -2.58
TRIM38O00635 MIR587-201ENST00000384845 96 ntBASIC-1.08□□□□□ -2.58
TRIM38O00635 SNORD115-45-201ENST00000391078 81 ntBASIC-1.08□□□□□ -2.58
TRIM38O00635 RNA5SP405-201ENST00000363059 114 ntBASIC-1.09□□□□□ -2.58
TRIM38O00635 RNU6-194P-201ENST00000363862 105 ntBASIC-1.09□□□□□ -2.58
TRIM38O00635 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.09□□□□□ -2.58
TRIM38O00635 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.09□□□□□ -2.58
TRIM38O00635 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.09□□□□□ -2.58
TRIM38O00635 AL359920.1-201ENST00000618332 176 ntBASIC-1.11□□□□□ -2.59
TRIM38O00635 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.13□□□□□ -2.59
TRIM38O00635 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.13□□□□□ -2.59
TRIM38O00635 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.13□□□□□ -2.59
TRIM38O00635 RNU6-627P-201ENST00000364032 102 ntBASIC-1.14□□□□□ -2.59
TRIM38O00635 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.16□□□□□ -2.6
TRIM38O00635 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.17□□□□□ -2.6
TRIM38O00635 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.17□□□□□ -2.6
TRIM38O00635 MIR198-201ENST00000637333 62 ntBASIC-1.17□□□□□ -2.6
TRIM38O00635 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.18□□□□□ -2.6
TRIM38O00635 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.19□□□□□ -2.6
TRIM38O00635 RNA5SP461-201ENST00000516451 104 ntBASIC-1.21□□□□□ -2.6
TRIM38O00635 MIR4320-201ENST00000636981 65 ntBASIC-1.21□□□□□ -2.6
TRIM38O00635 RNY4P25-201ENST00000459254 96 ntBASIC-1.23□□□□□ -2.61
TRIM38O00635 MIR1246-201ENST00000636535 73 ntBASIC-1.23□□□□□ -2.61
TRIM38O00635 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.24□□□□□ -2.61
TRIM38O00635 MIR5693-201ENST00000577722 73 ntBASIC-1.27□□□□□ -2.61
TRIM38O00635 MIR4723-201ENST00000585070 81 ntBASIC-1.27□□□□□ -2.61
TRIM38O00635 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.28□□□□□ -2.61
TRIM38O00635 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.28□□□□□ -2.61
TRIM38O00635 MIR3139-201ENST00000579145 76 ntBASIC-1.29□□□□□ -2.62
TRIM38O00635 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.3□□□□□ -2.62
TRIM38O00635 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.3□□□□□ -2.62
TRIM38O00635 MIR601-201ENST00000385256 79 ntBASIC-1.3□□□□□ -2.62
TRIM38O00635 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.32□□□□□ -2.62
TRIM38O00635 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.33□□□□□ -2.62
TRIM38O00635 RNA5SP180-201ENST00000516181 101 ntBASIC-1.35□□□□□ -2.63
TRIM38O00635 MT-TM-201ENST00000387377 68 ntBASIC-1.36□□□□□ -2.63
TRIM38O00635 SNORD114-13-201ENST00000364377 74 ntBASIC-1.37□□□□□ -2.63
TRIM38O00635 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.38□□□□□ -2.63
TRIM38O00635 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.39□□□□□ -2.63
TRIM38O00635 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.39□□□□□ -2.63
TRIM38O00635 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.4□□□□□ -2.63
TRIM38O00635 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.41□□□□□ -2.64
TRIM38O00635 RNU6-230P-201ENST00000362457 104 ntBASIC-1.42□□□□□ -2.64
TRIM38O00635 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.42□□□□□ -2.64
TRIM38O00635 RNU4-85P-201ENST00000364675 123 ntBASIC-1.44□□□□□ -2.64
TRIM38O00635 MIR1285-2-201ENST00000408311 88 ntBASIC-1.44□□□□□ -2.64
TRIM38O00635 RNU6-892P-201ENST00000410335 99 ntBASIC-1.45□□□□□ -2.64
TRIM38O00635 RNA5SP449-201ENST00000516871 130 ntBASIC-1.47□□□□□ -2.64
TRIM38O00635 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.47□□□□□ -2.64
TRIM38O00635 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.49□□□□□ -2.65
TRIM38O00635 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.49□□□□□ -2.65
TRIM38O00635 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.49□□□□□ -2.65
TRIM38O00635 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.49□□□□□ -2.65
TRIM38O00635 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.52□□□□□ -2.65
TRIM38O00635 MIR4441-201ENST00000582623 100 ntBASIC-1.52□□□□□ -2.65
TRIM38O00635 MIR365A-201ENST00000362260 87 ntBASIC-1.53□□□□□ -2.65
TRIM38O00635 U4.2-201ENST00000618561 85 ntBASIC-1.54□□□□□ -2.66
TRIM38O00635 SNORD114-3-201ENST00000364969 75 ntBASIC-1.59□□□□□ -2.66
TRIM38O00635 MIR1207-201ENST00000408249 87 ntBASIC-1.6□□□□□ -2.67
TRIM38O00635 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.6□□□□□ -2.67
TRIM38O00635 RNU6-665P-201ENST00000384639 107 ntBASIC-1.65□□□□□ -2.67
TRIM38O00635 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.71□□□□□ -2.68
TRIM38O00635 RNY4P27-201ENST00000363341 96 ntBASIC-1.73□□□□□ -2.69
TRIM38O00635 MIR496-201ENST00000385226 102 ntBASIC-1.77□□□□□ -2.69
TRIM38O00635 MIR509-1-201ENST00000385265 94 ntBASIC-1.78□□□□□ -2.69
TRIM38O00635 MIR509-2-201ENST00000390724 91 ntBASIC-1.78□□□□□ -2.69
TRIM38O00635 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.88□□□□□ -2.71
TRIM38O00635 RNY4P10-201ENST00000365571 96 ntBASIC-1.88□□□□□ -2.71
TRIM38O00635 RNA5SP106-201ENST00000517274 100 ntBASIC-1.88□□□□□ -2.71
TRIM38O00635 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.89□□□□□ -2.71
TRIM38O00635 RNU6-119P-201ENST00000364882 107 ntBASIC-1.9□□□□□ -2.71
TRIM38O00635 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.9□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms