Protein–RNA interactions for Protein: A6NC98

CCDC88B, Coiled-coil domain-containing protein 88B, humanhuman

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88BA6NC98 RNU6-81P-201ENST00000365608 104 ntBASIC-6.74□□□□□ -3.49
CCDC88BA6NC98 RNU6-1276P-201ENST00000365372 104 ntBASIC-6.75□□□□□ -3.49
CCDC88BA6NC98 RNU6-640P-201ENST00000363693 105 ntBASIC-6.76□□□□□ -3.49
CCDC88BA6NC98 RNU6-1056P-201ENST00000383996 107 ntBASIC-6.76□□□□□ -3.49
CCDC88BA6NC98 RNU6-1160P-201ENST00000384546 104 ntBASIC-6.77□□□□□ -3.49
CCDC88BA6NC98 AP000770.2-201ENST00000623694 100 ntBASIC-6.77□□□□□ -3.49
CCDC88BA6NC98 RNU6-886P-201ENST00000384319 105 ntBASIC-6.79□□□□□ -3.5
CCDC88BA6NC98 RNU6-787P-201ENST00000384032 107 ntBASIC-6.81□□□□□ -3.5
CCDC88BA6NC98 MTCYBP6-201ENST00000441810 138 ntBASIC-6.81□□□□□ -3.5
CCDC88BA6NC98 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-6.83□□□□□ -3.5
CCDC88BA6NC98 AL117351.2-201ENST00000513571 157 ntBASIC-6.83□□□□□ -3.5
CCDC88BA6NC98 Y_RNA.506-201ENST00000384494 102 ntBASIC-6.85□□□□□ -3.51
CCDC88BA6NC98 Y_RNA.193-201ENST00000363979 102 ntBASIC-6.88□□□□□ -3.51
CCDC88BA6NC98 RNU6-1131P-201ENST00000364955 107 ntBASIC-6.88□□□□□ -3.51
CCDC88BA6NC98 RNY1P5-201ENST00000383890 115 ntBASIC-6.91□□□□□ -3.52
CCDC88BA6NC98 RNU6-32P-201ENST00000383948 107 ntBASIC-6.91□□□□□ -3.52
CCDC88BA6NC98 RNU6-13P-201ENST00000384248 107 ntBASIC-6.91□□□□□ -3.52
CCDC88BA6NC98 RNU6-12P-201ENST00000384604 107 ntBASIC-6.91□□□□□ -3.52
CCDC88BA6NC98 RNU6-41P-201ENST00000384741 107 ntBASIC-6.91□□□□□ -3.52
CCDC88BA6NC98 MIR606-201ENST00000384851 96 ntBASIC-6.91□□□□□ -3.52
CCDC88BA6NC98 RNU6-49P-201ENST00000384256 107 ntBASIC-6.92□□□□□ -3.52
CCDC88BA6NC98 AC008267.6-201ENST00000441664 139 ntBASIC-6.92□□□□□ -3.52
CCDC88BA6NC98 RNU6-294P-201ENST00000364999 102 ntBASIC-6.93□□□□□ -3.52
CCDC88BA6NC98 RNU6-388P-201ENST00000517012 105 ntBASIC-6.98□□□□□ -3.53
CCDC88BA6NC98 RNU6-389P-201ENST00000517048 105 ntBASIC-6.98□□□□□ -3.53
CCDC88BA6NC98 RNU6-153P-201ENST00000364422 104 ntBASIC-6.98□□□□□ -3.53
CCDC88BA6NC98 Y_RNA.535-201ENST00000384612 99 ntBASIC-6.99□□□□□ -3.53
CCDC88BA6NC98 RNU6-1091P-201ENST00000363945 107 ntBASIC-7.01□□□□□ -3.53
CCDC88BA6NC98 MIR4503-201ENST00000582187 83 ntBASIC-7.03□□□□□ -3.53
CCDC88BA6NC98 RNU6-471P-201ENST00000383944 106 ntBASIC-7.04□□□□□ -3.54
CCDC88BA6NC98 Y_RNA.464-201ENST00000384282 110 ntBASIC-7.04□□□□□ -3.54
CCDC88BA6NC98 MIR450A2-201ENST00000385022 100 ntBASIC-7.04□□□□□ -3.54
CCDC88BA6NC98 AL365222.1-201ENST00000614661 98 ntBASIC-7.04□□□□□ -3.54
CCDC88BA6NC98 RNU6-829P-201ENST00000363700 112 ntBASIC-7.05□□□□□ -3.54
CCDC88BA6NC98 RNU6-463P-201ENST00000384340 107 ntBASIC-7.07□□□□□ -3.54
CCDC88BA6NC98 SNORD111B-201ENST00000408587 80 ntBASIC-7.08□□□□□ -3.54
CCDC88BA6NC98 MIR548S-201ENST00000581352 82 ntBASIC-7.08□□□□□ -3.54
CCDC88BA6NC98 RNU6-1212P-201ENST00000517023 104 ntBASIC-7.1□□□□□ -3.55
CCDC88BA6NC98 MIR633-201ENST00000384821 98 ntBASIC-7.11□□□□□ -3.55
CCDC88BA6NC98 RNU6-738P-201ENST00000384531 106 ntBASIC-7.12□□□□□ -3.55
CCDC88BA6NC98 RNU6-753P-201ENST00000363926 107 ntBASIC-7.14□□□□□ -3.55
CCDC88BA6NC98 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-7.17□□□□□ -3.56
CCDC88BA6NC98 Y_RNA.386-201ENST00000383913 105 ntBASIC-7.17□□□□□ -3.56
CCDC88BA6NC98 AC026407.1-201ENST00000518369 204 ntBASIC-7.18□□□□□ -3.56
CCDC88BA6NC98 RNU6-147P-201ENST00000383983 107 ntBASIC-7.2□□□□□ -3.56
CCDC88BA6NC98 RNY4P19-201ENST00000362530 96 ntBASIC-7.22□□□□□ -3.56
CCDC88BA6NC98 RNY4P30-201ENST00000410216 95 ntBASIC-7.22□□□□□ -3.56
CCDC88BA6NC98 RNU6-930P-201ENST00000390938 100 ntBASIC-7.23□□□□□ -3.57
CCDC88BA6NC98 RNU6-485P-201ENST00000363475 107 ntBASIC-7.24□□□□□ -3.57
CCDC88BA6NC98 MIR548F3-201ENST00000408509 87 ntBASIC-7.24□□□□□ -3.57
CCDC88BA6NC98 Y_RNA.61-201ENST00000362835 102 ntBASIC-7.27□□□□□ -3.57
CCDC88BA6NC98 RNU6-820P-201ENST00000384273 107 ntBASIC-7.29□□□□□ -3.58
CCDC88BA6NC98 RNU6-406P-201ENST00000516470 107 ntBASIC-7.3□□□□□ -3.58
CCDC88BA6NC98 RNU6-1168P-201ENST00000390831 104 ntBASIC-7.32□□□□□ -3.58
CCDC88BA6NC98 RNU6-894P-201ENST00000517094 105 ntBASIC-7.34□□□□□ -3.58
CCDC88BA6NC98 RNU6-857P-201ENST00000515893 110 ntBASIC-7.36□□□□□ -3.59
CCDC88BA6NC98 RNU6-1275P-201ENST00000391087 107 ntBASIC-7.37□□□□□ -3.59
CCDC88BA6NC98 SNORA26.2-201ENST00000390922 122 ntBASIC-7.38□□□□□ -3.59
CCDC88BA6NC98 MIR3908-201ENST00000579798 126 ntBASIC-7.43□□□□□ -3.6
CCDC88BA6NC98 RNU6-22P-201ENST00000384355 107 ntBASIC-7.45□□□□□ -3.6
CCDC88BA6NC98 MIR1255A-201ENST00000408338 113 ntBASIC-7.45□□□□□ -3.6
CCDC88BA6NC98 RNU6-892P-201ENST00000410335 99 ntBASIC-7.45□□□□□ -3.6
CCDC88BA6NC98 RNU6-1154P-201ENST00000391001 104 ntBASIC-7.46□□□□□ -3.6
CCDC88BA6NC98 RNA5SP89-201ENST00000410300 108 ntBASIC-7.46□□□□□ -3.6
CCDC88BA6NC98 MIR3133-201ENST00000583157 78 ntBASIC-7.46□□□□□ -3.6
CCDC88BA6NC98 Y_RNA.81-201ENST00000362997 102 ntBASIC-7.47□□□□□ -3.61
CCDC88BA6NC98 RNU6-327P-201ENST00000516270 127 ntBASIC-7.48□□□□□ -3.61
CCDC88BA6NC98 MIR3202-2-201ENST00000635980 79 ntBASIC-7.48□□□□□ -3.61
CCDC88BA6NC98 RNU6-936P-201ENST00000384005 107 ntBASIC-7.49□□□□□ -3.61
CCDC88BA6NC98 Y_RNA.703-201ENST00000516846 111 ntBASIC-7.54□□□□□ -3.62
CCDC88BA6NC98 U6.103-201ENST00000637085 61 ntBASIC-7.54□□□□□ -3.62
CCDC88BA6NC98 MT-TG-201ENST00000387429 68 ntBASIC-7.55□□□□□ -3.62
CCDC88BA6NC98 RNU6-279P-201ENST00000391297 101 ntBASIC-7.55□□□□□ -3.62
CCDC88BA6NC98 AC079150.2-201ENST00000443733 78 ntBASIC-7.55□□□□□ -3.62
CCDC88BA6NC98 RNU6-1117P-201ENST00000384525 104 ntBASIC-7.56□□□□□ -3.62
CCDC88BA6NC98 RNU6-313P-201ENST00000516317 112 ntBASIC-7.59□□□□□ -3.62
CCDC88BA6NC98 MIR4662A-201ENST00000637499 67 ntBASIC-7.62□□□□□ -3.63
CCDC88BA6NC98 RNU6-573P-201ENST00000383938 106 ntBASIC-7.68□□□□□ -3.64
CCDC88BA6NC98 RNU6-1045P-201ENST00000516321 107 ntBASIC-7.68□□□□□ -3.64
CCDC88BA6NC98 DLEU2_4.2-201ENST00000616613 58 ntBASIC-7.75□□□□□ -3.65
CCDC88BA6NC98 RNU6-919P-201ENST00000516731 104 ntBASIC-7.78□□□□□ -3.65
CCDC88BA6NC98 RNU6-133P-201ENST00000383989 107 ntBASIC-7.8□□□□□ -3.66
CCDC88BA6NC98 RNU6-499P-201ENST00000365615 107 ntBASIC-7.81□□□□□ -3.66
CCDC88BA6NC98 SNORD20-201ENST00000384550 80 ntBASIC-7.84□□□□□ -3.66
CCDC88BA6NC98 Y_RNA.694-201ENST00000516677 117 ntBASIC-7.84□□□□□ -3.66
CCDC88BA6NC98 AC125388.1-201ENST00000459631 156 ntBASIC-7.89□□□□□ -3.67
CCDC88BA6NC98 MIR5582-201ENST00000579697 68 ntBASIC-7.9□□□□□ -3.67
CCDC88BA6NC98 RNA5SP225-201ENST00000410874 135 ntBASIC-7.91□□□□□ -3.68
CCDC88BA6NC98 Y_RNA.369-201ENST00000365568 117 ntBASIC-7.93□□□□□ -3.68
CCDC88BA6NC98 RNU6-215P-201ENST00000365169 102 ntBASIC-7.94□□□□□ -3.68
CCDC88BA6NC98 RNU6-44P-201ENST00000384045 107 ntBASIC-7.95□□□□□ -3.68
CCDC88BA6NC98 MIR3671-201ENST00000580455 88 ntBASIC-7.98□□□□□ -3.69
CCDC88BA6NC98 SNORD78.1-201ENST00000390866 65 ntBASIC-8□□□□□ -3.69
CCDC88BA6NC98 RNU6-614P-201ENST00000384369 107 ntBASIC-8.03□□□□□ -3.69
CCDC88BA6NC98 U6.59-201ENST00000615686 107 ntBASIC-8.03□□□□□ -3.69
CCDC88BA6NC98 MIR548T-201ENST00000408369 74 ntBASIC-8.07□□□□□ -3.7
CCDC88BA6NC98 SNORD73B-201ENST00000364394 72 ntBASIC-8.09□□□□□ -3.7
CCDC88BA6NC98 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-8.15□□□□□ -3.71
CCDC88BA6NC98 Y_RNA.388-201ENST00000383919 113 ntBASIC-8.16□□□□□ -3.72
CCDC88BA6NC98 RNY4P29-201ENST00000410801 97 ntBASIC-8.18□□□□□ -3.72
Retrieved 100 of 98,524 protein–RNA pairs in 364.2 ms