Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 RNU6-400P-201ENST00000391173 106 ntBASIC-1□□□□□ -2.57
USP35Q9P2H5 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1□□□□□ -2.57
USP35Q9P2H5 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.01□□□□□ -2.57
USP35Q9P2H5 RNA5SP86-201ENST00000390869 98 ntBASIC-1.01□□□□□ -2.57
USP35Q9P2H5 RNA5SP180-201ENST00000516181 101 ntBASIC-1.01□□□□□ -2.57
USP35Q9P2H5 RNU6-419P-201ENST00000517030 63 ntBASIC-1.01□□□□□ -2.57
USP35Q9P2H5 AC013734.1-201ENST00000619329 111 ntBASIC-1.01□□□□□ -2.57
USP35Q9P2H5 RNY3P8-201ENST00000411366 126 ntBASIC-1.02□□□□□ -2.57
USP35Q9P2H5 AC079150.2-201ENST00000443733 78 ntBASIC-1.02□□□□□ -2.57
USP35Q9P2H5 HLA-S-202ENST00000425174 53 ntBASIC-1.03□□□□□ -2.57
USP35Q9P2H5 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.03□□□□□ -2.57
USP35Q9P2H5 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.05□□□□□ -2.58
USP35Q9P2H5 RNU6-499P-201ENST00000365615 107 ntBASIC-1.05□□□□□ -2.58
USP35Q9P2H5 AL451105.1-201ENST00000450005 189 ntBASIC-1.05□□□□□ -2.58
USP35Q9P2H5 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.05□□□□□ -2.58
USP35Q9P2H5 RNU6-695P-201ENST00000391157 104 ntBASIC-1.06□□□□□ -2.58
USP35Q9P2H5 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.07□□□□□ -2.58
USP35Q9P2H5 MIR548X-201ENST00000580069 75 ntBASIC-1.07□□□□□ -2.58
USP35Q9P2H5 MIR581-201ENST00000384895 96 ntBASIC-1.08□□□□□ -2.58
USP35Q9P2H5 RNU6-530P-201ENST00000391180 107 ntBASIC-1.08□□□□□ -2.58
USP35Q9P2H5 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.09□□□□□ -2.58
USP35Q9P2H5 RNU6-226P-201ENST00000363778 107 ntBASIC-1.09□□□□□ -2.58
USP35Q9P2H5 MIR487B-201ENST00000385021 84 ntBASIC-1.09□□□□□ -2.58
USP35Q9P2H5 MIR548H1-201ENST00000408610 102 ntBASIC-1.09□□□□□ -2.58
USP35Q9P2H5 MIR3123-201ENST00000583417 75 ntBASIC-1.1□□□□□ -2.59
USP35Q9P2H5 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.11□□□□□ -2.59
USP35Q9P2H5 MIR1246-201ENST00000636535 73 ntBASIC-1.11□□□□□ -2.59
USP35Q9P2H5 MIR202-201ENST00000362219 110 ntBASIC-1.12□□□□□ -2.59
USP35Q9P2H5 U6.97-201ENST00000636904 101 ntBASIC-1.13□□□□□ -2.59
USP35Q9P2H5 SNORD45.2-201ENST00000363552 72 ntBASIC-1.14□□□□□ -2.59
USP35Q9P2H5 RNU6-361P-201ENST00000364454 107 ntBASIC-1.14□□□□□ -2.59
USP35Q9P2H5 RNU6-841P-201ENST00000383872 107 ntBASIC-1.14□□□□□ -2.59
USP35Q9P2H5 MIR548N-201ENST00000408742 75 ntBASIC-1.15□□□□□ -2.59
USP35Q9P2H5 RNU6-980P-201ENST00000516925 103 ntBASIC-1.15□□□□□ -2.59
USP35Q9P2H5 MIR548W-201ENST00000581970 74 ntBASIC-1.15□□□□□ -2.59
USP35Q9P2H5 MIR548AM-201ENST00000584298 74 ntBASIC-1.15□□□□□ -2.59
USP35Q9P2H5 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.15□□□□□ -2.59
USP35Q9P2H5 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.16□□□□□ -2.6
USP35Q9P2H5 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.17□□□□□ -2.6
USP35Q9P2H5 RNU6-742P-201ENST00000365289 107 ntBASIC-1.17□□□□□ -2.6
USP35Q9P2H5 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.17□□□□□ -2.6
USP35Q9P2H5 AC108019.1-201ENST00000512540 175 ntBASIC-1.17□□□□□ -2.6
USP35Q9P2H5 RNU4-33P-201ENST00000364316 85 ntBASIC-1.18□□□□□ -2.6
USP35Q9P2H5 SNORA17.4-201ENST00000391287 132 ntBASIC-1.18□□□□□ -2.6
USP35Q9P2H5 SNORD18C-201ENST00000362704 69 ntBASIC-1.19□□□□□ -2.6
USP35Q9P2H5 SNORD18.1-201ENST00000363807 70 ntBASIC-1.19□□□□□ -2.6
USP35Q9P2H5 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.19□□□□□ -2.6
USP35Q9P2H5 RNU6-68P-201ENST00000516576 104 ntBASIC-1.19□□□□□ -2.6
USP35Q9P2H5 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.19□□□□□ -2.6
USP35Q9P2H5 SNORD60-201ENST00000383903 83 ntBASIC-1.2□□□□□ -2.6
USP35Q9P2H5 snoU13.10-201ENST00000459301 103 ntBASIC-1.21□□□□□ -2.6
USP35Q9P2H5 MIR4756-201ENST00000577874 78 ntBASIC-1.21□□□□□ -2.6
USP35Q9P2H5 MIR4426-201ENST00000640330 63 ntBASIC-1.21□□□□□ -2.6
USP35Q9P2H5 RNU4-88P-201ENST00000411220 86 ntBASIC-1.22□□□□□ -2.6
USP35Q9P2H5 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.23□□□□□ -2.61
USP35Q9P2H5 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.23□□□□□ -2.61
USP35Q9P2H5 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.23□□□□□ -2.61
USP35Q9P2H5 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.24□□□□□ -2.61
USP35Q9P2H5 RNU6-983P-201ENST00000516004 103 ntBASIC-1.26□□□□□ -2.61
USP35Q9P2H5 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.27□□□□□ -2.61
USP35Q9P2H5 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.27□□□□□ -2.61
USP35Q9P2H5 MIR664B-201ENST00000626756 61 ntBASIC-1.27□□□□□ -2.61
USP35Q9P2H5 RNU6-614P-201ENST00000384369 107 ntBASIC-1.28□□□□□ -2.61
USP35Q9P2H5 U6.59-201ENST00000615686 107 ntBASIC-1.28□□□□□ -2.61
USP35Q9P2H5 RNU6-936P-201ENST00000384005 107 ntBASIC-1.29□□□□□ -2.62
USP35Q9P2H5 RNU6-300P-201ENST00000459080 104 ntBASIC-1.29□□□□□ -2.62
USP35Q9P2H5 RNU6-912P-201ENST00000363800 104 ntBASIC-1.3□□□□□ -2.62
USP35Q9P2H5 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.3□□□□□ -2.62
USP35Q9P2H5 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.3□□□□□ -2.62
USP35Q9P2H5 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.3□□□□□ -2.62
USP35Q9P2H5 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.31□□□□□ -2.62
USP35Q9P2H5 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.31□□□□□ -2.62
USP35Q9P2H5 MIR379-201ENST00000362218 67 ntBASIC-1.32□□□□□ -2.62
USP35Q9P2H5 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.32□□□□□ -2.62
USP35Q9P2H5 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.32□□□□□ -2.62
USP35Q9P2H5 AC097484.2-201ENST00000509147 251 ntBASIC-1.32□□□□□ -2.62
USP35Q9P2H5 RNU6-176P-201ENST00000517196 105 ntBASIC-1.32□□□□□ -2.62
USP35Q9P2H5 RNY4P7-201ENST00000364600 96 ntBASIC-1.33□□□□□ -2.62
USP35Q9P2H5 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.34□□□□□ -2.62
USP35Q9P2H5 RNU6-753P-201ENST00000363926 107 ntBASIC-1.35□□□□□ -2.63
USP35Q9P2H5 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.35□□□□□ -2.63
USP35Q9P2H5 MTND4LP19-201ENST00000403051 166 ntBASIC-1.35□□□□□ -2.63
USP35Q9P2H5 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.35□□□□□ -2.63
USP35Q9P2H5 MIR4748-201ENST00000578076 82 ntBASIC-1.35□□□□□ -2.63
USP35Q9P2H5 MIR548AL-201ENST00000578416 97 ntBASIC-1.35□□□□□ -2.63
USP35Q9P2H5 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.35□□□□□ -2.63
USP35Q9P2H5 SNORD113-3-201ENST00000364830 72 ntBASIC-1.36□□□□□ -2.63
USP35Q9P2H5 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.36□□□□□ -2.63
USP35Q9P2H5 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.36□□□□□ -2.63
USP35Q9P2H5 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.37□□□□□ -2.63
USP35Q9P2H5 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.37□□□□□ -2.63
USP35Q9P2H5 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.37□□□□□ -2.63
USP35Q9P2H5 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.37□□□□□ -2.63
USP35Q9P2H5 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.37□□□□□ -2.63
USP35Q9P2H5 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.37□□□□□ -2.63
USP35Q9P2H5 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.38□□□□□ -2.63
USP35Q9P2H5 MIR496-201ENST00000385226 102 ntBASIC-1.38□□□□□ -2.63
USP35Q9P2H5 RNA5SP405-201ENST00000363059 114 ntBASIC-1.39□□□□□ -2.63
USP35Q9P2H5 FTX_4.1-201ENST00000616291 147 ntBASIC-1.39□□□□□ -2.63
USP35Q9P2H5 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms