Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.8□□□□□ -2.54
SSU72Q9NP77 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.8□□□□□ -2.54
SSU72Q9NP77 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.83□□□□□ -2.54
SSU72Q9NP77 SNORD18C-201ENST00000362704 69 ntBASIC-0.84□□□□□ -2.54
SSU72Q9NP77 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.84□□□□□ -2.54
SSU72Q9NP77 MIR6874-201ENST00000635894 71 ntBASIC-0.84□□□□□ -2.54
SSU72Q9NP77 AC091912.2-201ENST00000624798 167 ntBASIC-0.85□□□□□ -2.55
SSU72Q9NP77 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.86□□□□□ -2.55
SSU72Q9NP77 RNU6-695P-201ENST00000391157 104 ntBASIC-0.86□□□□□ -2.55
SSU72Q9NP77 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.87□□□□□ -2.55
SSU72Q9NP77 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.87□□□□□ -2.55
SSU72Q9NP77 MIR409-201ENST00000362237 79 ntBASIC-0.89□□□□□ -2.55
SSU72Q9NP77 RNU6-576P-201ENST00000390854 102 ntBASIC-0.9□□□□□ -2.55
SSU72Q9NP77 AL627230.5-201ENST00000619807 58 ntBASIC-0.9□□□□□ -2.55
SSU72Q9NP77 U6.103-201ENST00000637085 61 ntBASIC-0.91□□□□□ -2.56
SSU72Q9NP77 MIR4499-201ENST00000584834 69 ntBASIC-0.92□□□□□ -2.56
SSU72Q9NP77 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.93□□□□□ -2.56
SSU72Q9NP77 MIR196A1-201ENST00000388006 70 ntBASIC-0.93□□□□□ -2.56
SSU72Q9NP77 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.93□□□□□ -2.56
SSU72Q9NP77 MIR379-201ENST00000362218 67 ntBASIC-0.94□□□□□ -2.56
SSU72Q9NP77 RNU6-724P-201ENST00000390958 105 ntBASIC-0.95□□□□□ -2.56
SSU72Q9NP77 RNA5SP266-201ENST00000410273 108 ntBASIC-0.95□□□□□ -2.56
SSU72Q9NP77 uc_338.19-201ENST00000616808 99 ntBASIC-0.98□□□□□ -2.57
SSU72Q9NP77 RNU6-912P-201ENST00000363800 104 ntBASIC-1□□□□□ -2.57
SSU72Q9NP77 RNA5SP331-201ENST00000364986 107 ntBASIC-1□□□□□ -2.57
SSU72Q9NP77 RNU6-400P-201ENST00000391173 106 ntBASIC-1□□□□□ -2.57
SSU72Q9NP77 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.01□□□□□ -2.57
SSU72Q9NP77 MIR587-201ENST00000384845 96 ntBASIC-1.01□□□□□ -2.57
SSU72Q9NP77 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.01□□□□□ -2.57
SSU72Q9NP77 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.02□□□□□ -2.57
SSU72Q9NP77 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.02□□□□□ -2.57
SSU72Q9NP77 MIR8485-201ENST00000401372 91 ntBASIC-1.03□□□□□ -2.57
SSU72Q9NP77 MIR6738-201ENST00000619620 64 ntBASIC-1.03□□□□□ -2.57
SSU72Q9NP77 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.06□□□□□ -2.58
SSU72Q9NP77 RNU6-10P-201ENST00000384036 107 ntBASIC-1.06□□□□□ -2.58
SSU72Q9NP77 SNORD83B-201ENST00000386745 93 ntBASIC-1.06□□□□□ -2.58
SSU72Q9NP77 MIR4324-201ENST00000584846 72 ntBASIC-1.07□□□□□ -2.58
SSU72Q9NP77 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.08□□□□□ -2.58
SSU72Q9NP77 SNX3P1X-201ENST00000414887 175 ntBASIC-1.08□□□□□ -2.58
SSU72Q9NP77 SCARNA17-201ENST00000516183 144 ntBASIC-1.08□□□□□ -2.58
SSU72Q9NP77 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.09□□□□□ -2.58
SSU72Q9NP77 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.09□□□□□ -2.58
SSU72Q9NP77 MIR6502-201ENST00000617296 76 ntBASIC-1.1□□□□□ -2.59
SSU72Q9NP77 SNORD115.2-201ENST00000391126 59 ntBASIC-1.11□□□□□ -2.59
SSU72Q9NP77 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.13□□□□□ -2.59
SSU72Q9NP77 MIR3123-201ENST00000583417 75 ntBASIC-1.13□□□□□ -2.59
SSU72Q9NP77 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.14□□□□□ -2.59
SSU72Q9NP77 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-1.14□□□□□ -2.59
SSU72Q9NP77 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.14□□□□□ -2.59
SSU72Q9NP77 MIR4320-201ENST00000636981 65 ntBASIC-1.14□□□□□ -2.59
SSU72Q9NP77 MIR548H1-201ENST00000408610 102 ntBASIC-1.15□□□□□ -2.59
SSU72Q9NP77 RNA5SP224-201ENST00000365069 126 ntBASIC-1.16□□□□□ -2.6
SSU72Q9NP77 RNU6-836P-201ENST00000362920 107 ntBASIC-1.18□□□□□ -2.6
SSU72Q9NP77 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.18□□□□□ -2.6
SSU72Q9NP77 MIR548W-201ENST00000581970 74 ntBASIC-1.18□□□□□ -2.6
SSU72Q9NP77 AC138207.3-201ENST00000585289 166 ntBASIC-1.18□□□□□ -2.6
SSU72Q9NP77 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.18□□□□□ -2.6
SSU72Q9NP77 FTX_4.1-201ENST00000616291 147 ntBASIC-1.18□□□□□ -2.6
SSU72Q9NP77 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.19□□□□□ -2.6
SSU72Q9NP77 SNORD111B-201ENST00000408587 80 ntBASIC-1.19□□□□□ -2.6
SSU72Q9NP77 snoU13.10-201ENST00000459301 103 ntBASIC-1.2□□□□□ -2.6
SSU72Q9NP77 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.21□□□□□ -2.6
SSU72Q9NP77 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.21□□□□□ -2.6
SSU72Q9NP77 MIR378F-201ENST00000578143 78 ntBASIC-1.22□□□□□ -2.6
SSU72Q9NP77 MIR601-201ENST00000385256 79 ntBASIC-1.24□□□□□ -2.61
SSU72Q9NP77 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.25□□□□□ -2.61
SSU72Q9NP77 MIR3165-201ENST00000579874 75 ntBASIC-1.26□□□□□ -2.61
SSU72Q9NP77 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.27□□□□□ -2.61
SSU72Q9NP77 MIR1254-1-201ENST00000408257 97 ntBASIC-1.27□□□□□ -2.61
SSU72Q9NP77 RNU6-485P-201ENST00000363475 107 ntBASIC-1.28□□□□□ -2.61
SSU72Q9NP77 MIR198-201ENST00000637333 62 ntBASIC-1.28□□□□□ -2.61
SSU72Q9NP77 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.29□□□□□ -2.62
SSU72Q9NP77 RNU6-841P-201ENST00000383872 107 ntBASIC-1.29□□□□□ -2.62
SSU72Q9NP77 MIR3115-201ENST00000577915 68 ntBASIC-1.29□□□□□ -2.62
SSU72Q9NP77 SNORD45C-201ENST00000383893 79 ntBASIC-1.3□□□□□ -2.62
SSU72Q9NP77 MIR4306-201ENST00000583390 91 ntBASIC-1.3□□□□□ -2.62
SSU72Q9NP77 RNA5SP461-201ENST00000516451 104 ntBASIC-1.31□□□□□ -2.62
SSU72Q9NP77 RNU6-345P-201ENST00000517001 107 ntBASIC-1.31□□□□□ -2.62
SSU72Q9NP77 SNORD113-3-201ENST00000364830 72 ntBASIC-1.32□□□□□ -2.62
SSU72Q9NP77 MIR4520-1-201ENST00000582609 70 ntBASIC-1.32□□□□□ -2.62
SSU72Q9NP77 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.33□□□□□ -2.62
SSU72Q9NP77 MIR548AM-201ENST00000584298 74 ntBASIC-1.33□□□□□ -2.62
SSU72Q9NP77 MIR4723-201ENST00000585070 81 ntBASIC-1.36□□□□□ -2.63
SSU72Q9NP77 MIR656-201ENST00000385224 78 ntBASIC-1.39□□□□□ -2.63
SSU72Q9NP77 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.4□□□□□ -2.63
SSU72Q9NP77 MIR487B-201ENST00000385021 84 ntBASIC-1.4□□□□□ -2.63
SSU72Q9NP77 RNA5SP86-201ENST00000390869 98 ntBASIC-1.42□□□□□ -2.64
SSU72Q9NP77 U4.2-201ENST00000618561 85 ntBASIC-1.42□□□□□ -2.64
SSU72Q9NP77 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.43□□□□□ -2.64
SSU72Q9NP77 MIR365A-201ENST00000362260 87 ntBASIC-1.44□□□□□ -2.64
SSU72Q9NP77 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.44□□□□□ -2.64
SSU72Q9NP77 MIR1285-2-201ENST00000408311 88 ntBASIC-1.44□□□□□ -2.64
SSU72Q9NP77 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.44□□□□□ -2.64
SSU72Q9NP77 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.44□□□□□ -2.64
SSU72Q9NP77 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.44□□□□□ -2.64
SSU72Q9NP77 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.44□□□□□ -2.64
SSU72Q9NP77 AC097484.2-201ENST00000509147 251 ntBASIC-1.46□□□□□ -2.64
SSU72Q9NP77 RNU6-133P-201ENST00000383989 107 ntBASIC-1.47□□□□□ -2.64
SSU72Q9NP77 RNA5SP180-201ENST00000516181 101 ntBASIC-1.47□□□□□ -2.64
SSU72Q9NP77 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms