Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MIR4324-201ENST00000584846 72 ntBASIC-1.01□□□□□ -2.57
PTCHD1Q96NR3 MIR4317-201ENST00000637586 65 ntBASIC-1.01□□□□□ -2.57
PTCHD1Q96NR3 MIR548H4-201ENST00000408689 111 ntBASIC-1.02□□□□□ -2.57
PTCHD1Q96NR3 RNU6-986P-201ENST00000363133 102 ntBASIC-1.03□□□□□ -2.57
PTCHD1Q96NR3 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.03□□□□□ -2.57
PTCHD1Q96NR3 RNA5SP266-201ENST00000410273 108 ntBASIC-1.04□□□□□ -2.58
PTCHD1Q96NR3 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.05□□□□□ -2.58
PTCHD1Q96NR3 MIR581-201ENST00000384895 96 ntBASIC-1.05□□□□□ -2.58
PTCHD1Q96NR3 AC091912.2-201ENST00000624798 167 ntBASIC-1.05□□□□□ -2.58
PTCHD1Q96NR3 MIR6874-201ENST00000635894 71 ntBASIC-1.06□□□□□ -2.58
PTCHD1Q96NR3 MIR4306-201ENST00000583390 91 ntBASIC-1.07□□□□□ -2.58
PTCHD1Q96NR3 MIR6738-201ENST00000619620 64 ntBASIC-1.07□□□□□ -2.58
PTCHD1Q96NR3 SNORD18C-201ENST00000362704 69 ntBASIC-1.08□□□□□ -2.58
PTCHD1Q96NR3 RNA5SP331-201ENST00000364986 107 ntBASIC-1.08□□□□□ -2.58
PTCHD1Q96NR3 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.08□□□□□ -2.58
PTCHD1Q96NR3 MIR8485-201ENST00000401372 91 ntBASIC-1.08□□□□□ -2.58
PTCHD1Q96NR3 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.09□□□□□ -2.58
PTCHD1Q96NR3 RNU6-822P-201ENST00000362707 106 ntBASIC-1.1□□□□□ -2.59
PTCHD1Q96NR3 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.1□□□□□ -2.59
PTCHD1Q96NR3 MIR587-201ENST00000384845 96 ntBASIC-1.1□□□□□ -2.59
PTCHD1Q96NR3 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.11□□□□□ -2.59
PTCHD1Q96NR3 MIR3115-201ENST00000577915 68 ntBASIC-1.11□□□□□ -2.59
PTCHD1Q96NR3 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.12□□□□□ -2.59
PTCHD1Q96NR3 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.13□□□□□ -2.59
PTCHD1Q96NR3 RNU6-400P-201ENST00000391173 106 ntBASIC-1.13□□□□□ -2.59
PTCHD1Q96NR3 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.14□□□□□ -2.59
PTCHD1Q96NR3 RNU6-10P-201ENST00000384036 107 ntBASIC-1.15□□□□□ -2.59
PTCHD1Q96NR3 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.17□□□□□ -2.6
PTCHD1Q96NR3 RNU6-695P-201ENST00000391157 104 ntBASIC-1.18□□□□□ -2.6
PTCHD1Q96NR3 MIR379-201ENST00000362218 67 ntBASIC-1.19□□□□□ -2.6
PTCHD1Q96NR3 SNX3P1X-201ENST00000414887 175 ntBASIC-1.19□□□□□ -2.6
PTCHD1Q96NR3 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.2□□□□□ -2.6
PTCHD1Q96NR3 RNU6-59P-201ENST00000384787 107 ntBASIC-1.21□□□□□ -2.6
PTCHD1Q96NR3 RNU6-68P-201ENST00000516576 104 ntBASIC-1.21□□□□□ -2.6
PTCHD1Q96NR3 RNU6-706P-201ENST00000517229 104 ntBASIC-1.21□□□□□ -2.6
PTCHD1Q96NR3 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.24□□□□□ -2.61
PTCHD1Q96NR3 MIR4320-201ENST00000636981 65 ntBASIC-1.24□□□□□ -2.61
PTCHD1Q96NR3 MIR3165-201ENST00000579874 75 ntBASIC-1.25□□□□□ -2.61
PTCHD1Q96NR3 RNU6-226P-201ENST00000363778 107 ntBASIC-1.26□□□□□ -2.61
PTCHD1Q96NR3 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.26□□□□□ -2.61
PTCHD1Q96NR3 MIR6502-201ENST00000617296 76 ntBASIC-1.26□□□□□ -2.61
PTCHD1Q96NR3 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.26□□□□□ -2.61
PTCHD1Q96NR3 HLA-S-202ENST00000425174 53 ntBASIC-1.27□□□□□ -2.61
PTCHD1Q96NR3 MIR5591-201ENST00000578248 65 ntBASIC-1.27□□□□□ -2.61
PTCHD1Q96NR3 MIR4520-1-201ENST00000582609 70 ntBASIC-1.28□□□□□ -2.61
PTCHD1Q96NR3 AC138207.3-201ENST00000585289 166 ntBASIC-1.28□□□□□ -2.61
PTCHD1Q96NR3 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.29□□□□□ -2.62
PTCHD1Q96NR3 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.3□□□□□ -2.62
PTCHD1Q96NR3 RNA5SP461-201ENST00000516451 104 ntBASIC-1.31□□□□□ -2.62
PTCHD1Q96NR3 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.32□□□□□ -2.62
PTCHD1Q96NR3 MIR3123-201ENST00000583417 75 ntBASIC-1.34□□□□□ -2.62
PTCHD1Q96NR3 MIR4770-201ENST00000579149 58 ntBASIC-1.35□□□□□ -2.63
PTCHD1Q96NR3 RNU6-912P-201ENST00000363800 104 ntBASIC-1.36□□□□□ -2.63
PTCHD1Q96NR3 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.36□□□□□ -2.63
PTCHD1Q96NR3 RNA5SP86-201ENST00000390869 98 ntBASIC-1.37□□□□□ -2.63
PTCHD1Q96NR3 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.38□□□□□ -2.63
PTCHD1Q96NR3 MIR601-201ENST00000385256 79 ntBASIC-1.38□□□□□ -2.63
PTCHD1Q96NR3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.38□□□□□ -2.63
PTCHD1Q96NR3 MIR198-201ENST00000637333 62 ntBASIC-1.38□□□□□ -2.63
PTCHD1Q96NR3 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.42□□□□□ -2.64
PTCHD1Q96NR3 MIR487B-201ENST00000385021 84 ntBASIC-1.42□□□□□ -2.64
PTCHD1Q96NR3 SNORD115.2-201ENST00000391126 59 ntBASIC-1.42□□□□□ -2.64
PTCHD1Q96NR3 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.43□□□□□ -2.64
PTCHD1Q96NR3 MIR548H1-201ENST00000408610 102 ntBASIC-1.43□□□□□ -2.64
PTCHD1Q96NR3 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.45□□□□□ -2.64
PTCHD1Q96NR3 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.46□□□□□ -2.64
PTCHD1Q96NR3 RNU6-841P-201ENST00000383872 107 ntBASIC-1.47□□□□□ -2.64
PTCHD1Q96NR3 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.47□□□□□ -2.64
PTCHD1Q96NR3 MIR1246-201ENST00000636535 73 ntBASIC-1.47□□□□□ -2.64
PTCHD1Q96NR3 U6.103-201ENST00000637085 61 ntBASIC-1.47□□□□□ -2.64
PTCHD1Q96NR3 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.48□□□□□ -2.65
PTCHD1Q96NR3 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.49□□□□□ -2.65
PTCHD1Q96NR3 snoU13.10-201ENST00000459301 103 ntBASIC-1.49□□□□□ -2.65
PTCHD1Q96NR3 MIR4723-201ENST00000585070 81 ntBASIC-1.49□□□□□ -2.65
PTCHD1Q96NR3 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.5□□□□□ -2.65
PTCHD1Q96NR3 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.5□□□□□ -2.65
PTCHD1Q96NR3 MIR548W-201ENST00000581970 74 ntBASIC-1.5□□□□□ -2.65
PTCHD1Q96NR3 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.5□□□□□ -2.65
PTCHD1Q96NR3 RNA5SP180-201ENST00000516181 101 ntBASIC-1.51□□□□□ -2.65
PTCHD1Q96NR3 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.51□□□□□ -2.65
PTCHD1Q96NR3 SNORD18.1-201ENST00000363807 70 ntBASIC-1.52□□□□□ -2.65
PTCHD1Q96NR3 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.53□□□□□ -2.65
PTCHD1Q96NR3 FTX_4.1-201ENST00000616291 147 ntBASIC-1.53□□□□□ -2.65
PTCHD1Q96NR3 MIR548AM-201ENST00000584298 74 ntBASIC-1.54□□□□□ -2.66
PTCHD1Q96NR3 RNU6-836P-201ENST00000362920 107 ntBASIC-1.55□□□□□ -2.66
PTCHD1Q96NR3 AC108019.1-201ENST00000512540 175 ntBASIC-1.55□□□□□ -2.66
PTCHD1Q96NR3 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.56□□□□□ -2.66
PTCHD1Q96NR3 RNU6-983P-201ENST00000516004 103 ntBASIC-1.56□□□□□ -2.66
PTCHD1Q96NR3 MIR4756-201ENST00000577874 78 ntBASIC-1.56□□□□□ -2.66
PTCHD1Q96NR3 U4.2-201ENST00000618561 85 ntBASIC-1.56□□□□□ -2.66
PTCHD1Q96NR3 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.57□□□□□ -2.66
PTCHD1Q96NR3 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.57□□□□□ -2.66
PTCHD1Q96NR3 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.57□□□□□ -2.66
PTCHD1Q96NR3 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.57□□□□□ -2.66
PTCHD1Q96NR3 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.57□□□□□ -2.66
PTCHD1Q96NR3 RNA5SP224-201ENST00000365069 126 ntBASIC-1.58□□□□□ -2.66
PTCHD1Q96NR3 MIR365A-201ENST00000362260 87 ntBASIC-1.59□□□□□ -2.66
PTCHD1Q96NR3 MIR1285-2-201ENST00000408311 88 ntBASIC-1.59□□□□□ -2.66
PTCHD1Q96NR3 RNU6-345P-201ENST00000517001 107 ntBASIC-1.59□□□□□ -2.66
PTCHD1Q96NR3 MIR1254-1-201ENST00000408257 97 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 247.9 ms