Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 RNU6-841P-201ENST00000383872 107 ntBASIC-2.12□□□□□ -2.75
SNRNP48Q6IEG0 AC005520.4-201ENST00000604337 90 ntBASIC-2.12□□□□□ -2.75
SNRNP48Q6IEG0 AC013734.1-201ENST00000619329 111 ntBASIC-2.12□□□□□ -2.75
SNRNP48Q6IEG0 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.13□□□□□ -2.75
SNRNP48Q6IEG0 RNU6-810P-201ENST00000364001 107 ntBASIC-2.13□□□□□ -2.75
SNRNP48Q6IEG0 RNU6-279P-201ENST00000391297 101 ntBASIC-2.13□□□□□ -2.75
SNRNP48Q6IEG0 RNU6-871P-201ENST00000516122 100 ntBASIC-2.13□□□□□ -2.75
SNRNP48Q6IEG0 MIR548AM-201ENST00000584298 74 ntBASIC-2.13□□□□□ -2.75
SNRNP48Q6IEG0 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.13□□□□□ -2.75
SNRNP48Q6IEG0 SNORD116.2-201ENST00000391251 93 ntBASIC-2.14□□□□□ -2.75
SNRNP48Q6IEG0 RNU6-122P-201ENST00000516818 107 ntBASIC-2.14□□□□□ -2.75
SNRNP48Q6IEG0 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.15□□□□□ -2.75
SNRNP48Q6IEG0 MT-TM-201ENST00000387377 68 ntBASIC-2.15□□□□□ -2.75
SNRNP48Q6IEG0 RNU6-828P-201ENST00000364876 107 ntBASIC-2.17□□□□□ -2.76
SNRNP48Q6IEG0 RNY3P8-201ENST00000411366 126 ntBASIC-2.17□□□□□ -2.76
SNRNP48Q6IEG0 RNU6-649P-201ENST00000384463 107 ntBASIC-2.18□□□□□ -2.76
SNRNP48Q6IEG0 RNU4-88P-201ENST00000411220 86 ntBASIC-2.18□□□□□ -2.76
SNRNP48Q6IEG0 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.2□□□□□ -2.76
SNRNP48Q6IEG0 U6.111-201ENST00000636093 83 ntBASIC-2.2□□□□□ -2.76
SNRNP48Q6IEG0 SNORA40B-201ENST00000385573 128 ntBASIC-2.21□□□□□ -2.76
SNRNP48Q6IEG0 U6.97-201ENST00000636904 101 ntBASIC-2.21□□□□□ -2.76
SNRNP48Q6IEG0 RNU6-520P-201ENST00000384717 104 ntBASIC-2.22□□□□□ -2.76
SNRNP48Q6IEG0 SNORD78.1-201ENST00000390866 65 ntBASIC-2.22□□□□□ -2.76
SNRNP48Q6IEG0 RNU6-539P-201ENST00000516665 103 ntBASIC-2.22□□□□□ -2.76
SNRNP48Q6IEG0 MIR4511-201ENST00000582784 87 ntBASIC-2.22□□□□□ -2.76
SNRNP48Q6IEG0 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.23□□□□□ -2.77
SNRNP48Q6IEG0 MIR548W-201ENST00000581970 74 ntBASIC-2.23□□□□□ -2.77
SNRNP48Q6IEG0 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.24□□□□□ -2.77
SNRNP48Q6IEG0 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.24□□□□□ -2.77
SNRNP48Q6IEG0 AC103706.3-201ENST00000636297 85 ntBASIC-2.24□□□□□ -2.77
SNRNP48Q6IEG0 RNU7-119P-201ENST00000459279 63 ntBASIC-2.25□□□□□ -2.77
SNRNP48Q6IEG0 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.25□□□□□ -2.77
SNRNP48Q6IEG0 RNA5SP225-201ENST00000410874 135 ntBASIC-2.26□□□□□ -2.77
SNRNP48Q6IEG0 SNORA40.16-201ENST00000517238 121 ntBASIC-2.26□□□□□ -2.77
SNRNP48Q6IEG0 RNU6-940P-201ENST00000363433 104 ntBASIC-2.27□□□□□ -2.77
SNRNP48Q6IEG0 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.28□□□□□ -2.77
SNRNP48Q6IEG0 snoU13.10-201ENST00000459301 103 ntBASIC-2.28□□□□□ -2.77
SNRNP48Q6IEG0 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.28□□□□□ -2.77
SNRNP48Q6IEG0 MIR581-201ENST00000384895 96 ntBASIC-2.29□□□□□ -2.78
SNRNP48Q6IEG0 MIR202-201ENST00000362219 110 ntBASIC-2.32□□□□□ -2.78
SNRNP48Q6IEG0 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.32□□□□□ -2.78
SNRNP48Q6IEG0 MIR1302-4-201ENST00000408701 150 ntBASIC-2.32□□□□□ -2.78
SNRNP48Q6IEG0 MIR466-201ENST00000580653 84 ntBASIC-2.32□□□□□ -2.78
SNRNP48Q6IEG0 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.32□□□□□ -2.78
SNRNP48Q6IEG0 SNORD60-201ENST00000383903 83 ntBASIC-2.33□□□□□ -2.78
SNRNP48Q6IEG0 RNU6-800P-201ENST00000384473 103 ntBASIC-2.33□□□□□ -2.78
SNRNP48Q6IEG0 MIR4679-1-201ENST00000637619 75 ntBASIC-2.33□□□□□ -2.78
SNRNP48Q6IEG0 MIR3938-201ENST00000582157 103 ntBASIC-2.34□□□□□ -2.78
SNRNP48Q6IEG0 SNORD18C-201ENST00000362704 69 ntBASIC-2.35□□□□□ -2.79
SNRNP48Q6IEG0 MIR4748-201ENST00000578076 82 ntBASIC-2.36□□□□□ -2.79
SNRNP48Q6IEG0 MIR4662A-201ENST00000637499 67 ntBASIC-2.36□□□□□ -2.79
SNRNP48Q6IEG0 RNU6-776P-201ENST00000364403 104 ntBASIC-2.37□□□□□ -2.79
SNRNP48Q6IEG0 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.37□□□□□ -2.79
SNRNP48Q6IEG0 RNU6-361P-201ENST00000364454 107 ntBASIC-2.38□□□□□ -2.79
SNRNP48Q6IEG0 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.38□□□□□ -2.79
SNRNP48Q6IEG0 RNU6-530P-201ENST00000391180 107 ntBASIC-2.38□□□□□ -2.79
SNRNP48Q6IEG0 SNORA17.4-201ENST00000391287 132 ntBASIC-2.38□□□□□ -2.79
SNRNP48Q6IEG0 SNORD45.2-201ENST00000363552 72 ntBASIC-2.39□□□□□ -2.79
SNRNP48Q6IEG0 MIR548N-201ENST00000408742 75 ntBASIC-2.39□□□□□ -2.79
SNRNP48Q6IEG0 AL451105.1-201ENST00000450005 189 ntBASIC-2.4□□□□□ -2.79
SNRNP48Q6IEG0 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.41□□□□□ -2.8
SNRNP48Q6IEG0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.42□□□□□ -2.8
SNRNP48Q6IEG0 AC110620.1-201ENST00000416042 228 ntBASIC-2.42□□□□□ -2.8
SNRNP48Q6IEG0 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.44□□□□□ -2.8
SNRNP48Q6IEG0 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.45□□□□□ -2.8
SNRNP48Q6IEG0 FTX_4.1-201ENST00000616291 147 ntBASIC-2.46□□□□□ -2.8
SNRNP48Q6IEG0 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.48□□□□□ -2.81
SNRNP48Q6IEG0 RNU6-419P-201ENST00000517030 63 ntBASIC-2.48□□□□□ -2.81
SNRNP48Q6IEG0 MIR4426-201ENST00000640330 63 ntBASIC-2.48□□□□□ -2.81
SNRNP48Q6IEG0 RNU6-230P-201ENST00000362457 104 ntBASIC-2.49□□□□□ -2.81
SNRNP48Q6IEG0 Y_RNA.685-201ENST00000516532 108 ntBASIC-2.49□□□□□ -2.81
SNRNP48Q6IEG0 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.5□□□□□ -2.81
SNRNP48Q6IEG0 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.5□□□□□ -2.81
SNRNP48Q6IEG0 RNU6-68P-201ENST00000516576 104 ntBASIC-2.5□□□□□ -2.81
SNRNP48Q6IEG0 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.5□□□□□ -2.81
SNRNP48Q6IEG0 AC097484.2-201ENST00000509147 251 ntBASIC-2.51□□□□□ -2.81
SNRNP48Q6IEG0 RNY4P9-201ENST00000363194 97 ntBASIC-2.52□□□□□ -2.81
SNRNP48Q6IEG0 RNU6-471P-201ENST00000383944 106 ntBASIC-2.54□□□□□ -2.82
SNRNP48Q6IEG0 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.54□□□□□ -2.82
SNRNP48Q6IEG0 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.54□□□□□ -2.82
SNRNP48Q6IEG0 SNORD113-3-201ENST00000364830 72 ntBASIC-2.55□□□□□ -2.82
SNRNP48Q6IEG0 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.55□□□□□ -2.82
SNRNP48Q6IEG0 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.55□□□□□ -2.82
SNRNP48Q6IEG0 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.55□□□□□ -2.82
SNRNP48Q6IEG0 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.55□□□□□ -2.82
SNRNP48Q6IEG0 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.55□□□□□ -2.82
SNRNP48Q6IEG0 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.55□□□□□ -2.82
SNRNP48Q6IEG0 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.56□□□□□ -2.82
SNRNP48Q6IEG0 RNU6-300P-201ENST00000459080 104 ntBASIC-2.57□□□□□ -2.82
SNRNP48Q6IEG0 AC114801.3-201ENST00000510231 177 ntBASIC-2.57□□□□□ -2.82
SNRNP48Q6IEG0 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.58□□□□□ -2.82
SNRNP48Q6IEG0 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.58□□□□□ -2.82
SNRNP48Q6IEG0 RNU6-590P-201ENST00000365039 107 ntBASIC-2.59□□□□□ -2.82
SNRNP48Q6IEG0 RNU6-176P-201ENST00000517196 105 ntBASIC-2.59□□□□□ -2.82
SNRNP48Q6IEG0 MIR379-201ENST00000362218 67 ntBASIC-2.61□□□□□ -2.83
SNRNP48Q6IEG0 RNU6-141P-201ENST00000410499 105 ntBASIC-2.61□□□□□ -2.83
SNRNP48Q6IEG0 RNU6-742P-201ENST00000365289 107 ntBASIC-2.62□□□□□ -2.83
SNRNP48Q6IEG0 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.62□□□□□ -2.83
SNRNP48Q6IEG0 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.62□□□□□ -2.83
SNRNP48Q6IEG0 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.63□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 231.3 ms