Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.41□□□□□ -2.48
SLC44A4Q53GD3 U6.103-201ENST00000637085 61 ntBASIC-0.41□□□□□ -2.48
SLC44A4Q53GD3 RNU6-912P-201ENST00000363800 104 ntBASIC-0.42□□□□□ -2.48
SLC44A4Q53GD3 snoU83B.1-201ENST00000517136 88 ntBASIC-0.42□□□□□ -2.48
SLC44A4Q53GD3 RNU6-176P-201ENST00000517196 105 ntBASIC-0.42□□□□□ -2.48
SLC44A4Q53GD3 AC138207.3-201ENST00000585289 166 ntBASIC-0.42□□□□□ -2.48
SLC44A4Q53GD3 MIR8064-201ENST00000612863 90 ntBASIC-0.42□□□□□ -2.48
SLC44A4Q53GD3 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.42□□□□□ -2.48
SLC44A4Q53GD3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.44□□□□□ -2.48
SLC44A4Q53GD3 MIR4499-201ENST00000584834 69 ntBASIC-0.44□□□□□ -2.48
SLC44A4Q53GD3 SNORD18C-201ENST00000362704 69 ntBASIC-0.45□□□□□ -2.48
SLC44A4Q53GD3 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.45□□□□□ -2.48
SLC44A4Q53GD3 MIR196A1-201ENST00000388006 70 ntBASIC-0.45□□□□□ -2.48
SLC44A4Q53GD3 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.46□□□□□ -2.48
SLC44A4Q53GD3 SNORD111B-201ENST00000408587 80 ntBASIC-0.46□□□□□ -2.48
SLC44A4Q53GD3 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.46□□□□□ -2.48
SLC44A4Q53GD3 RNA5SP67-201ENST00000516422 131 ntBASIC-0.47□□□□□ -2.48
SLC44A4Q53GD3 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.47□□□□□ -2.48
SLC44A4Q53GD3 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.47□□□□□ -2.48
SLC44A4Q53GD3 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.48□□□□□ -2.49
SLC44A4Q53GD3 MIR224-201ENST00000384889 81 ntBASIC-0.48□□□□□ -2.49
SLC44A4Q53GD3 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-0.48□□□□□ -2.49
SLC44A4Q53GD3 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.49□□□□□ -2.49
SLC44A4Q53GD3 uc_338.19-201ENST00000616808 99 ntBASIC-0.49□□□□□ -2.49
SLC44A4Q53GD3 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.5□□□□□ -2.49
SLC44A4Q53GD3 RNA5SP224-201ENST00000365069 126 ntBASIC-0.51□□□□□ -2.49
SLC44A4Q53GD3 RNU6-576P-201ENST00000390854 102 ntBASIC-0.51□□□□□ -2.49
SLC44A4Q53GD3 SNORD115.2-201ENST00000391126 59 ntBASIC-0.51□□□□□ -2.49
SLC44A4Q53GD3 MIR3681-201ENST00000580089 72 ntBASIC-0.51□□□□□ -2.49
SLC44A4Q53GD3 MIR548W-201ENST00000581970 74 ntBASIC-0.51□□□□□ -2.49
SLC44A4Q53GD3 MIR379-201ENST00000362218 67 ntBASIC-0.52□□□□□ -2.49
SLC44A4Q53GD3 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.52□□□□□ -2.49
SLC44A4Q53GD3 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.52□□□□□ -2.49
SLC44A4Q53GD3 MIR409-201ENST00000362237 79 ntBASIC-0.53□□□□□ -2.49
SLC44A4Q53GD3 FTX_4.1-201ENST00000616291 147 ntBASIC-0.53□□□□□ -2.49
SLC44A4Q53GD3 MIR6502-201ENST00000617296 76 ntBASIC-0.53□□□□□ -2.49
SLC44A4Q53GD3 RNA5SP331-201ENST00000364986 107 ntBASIC-0.54□□□□□ -2.5
SLC44A4Q53GD3 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.54□□□□□ -2.5
SLC44A4Q53GD3 MIR548H1-201ENST00000408610 102 ntBASIC-0.54□□□□□ -2.5
SLC44A4Q53GD3 snoU13.10-201ENST00000459301 103 ntBASIC-0.54□□□□□ -2.5
SLC44A4Q53GD3 MIR3123-201ENST00000583417 75 ntBASIC-0.54□□□□□ -2.5
SLC44A4Q53GD3 RNU6-485P-201ENST00000363475 107 ntBASIC-0.55□□□□□ -2.5
SLC44A4Q53GD3 RNU6-400P-201ENST00000391173 106 ntBASIC-0.55□□□□□ -2.5
SLC44A4Q53GD3 MIR1254-1-201ENST00000408257 97 ntBASIC-0.55□□□□□ -2.5
SLC44A4Q53GD3 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.56□□□□□ -2.5
SLC44A4Q53GD3 RNU6-836P-201ENST00000362920 107 ntBASIC-0.57□□□□□ -2.5
SLC44A4Q53GD3 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.57□□□□□ -2.5
SLC44A4Q53GD3 SNORD113-3-201ENST00000364830 72 ntBASIC-0.57□□□□□ -2.5
SLC44A4Q53GD3 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.57□□□□□ -2.5
SLC44A4Q53GD3 SNORD83B-201ENST00000386745 93 ntBASIC-0.57□□□□□ -2.5
SLC44A4Q53GD3 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.57□□□□□ -2.5
SLC44A4Q53GD3 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.58□□□□□ -2.5
SLC44A4Q53GD3 MIR487B-201ENST00000385021 84 ntBASIC-0.59□□□□□ -2.5
SLC44A4Q53GD3 MIR378F-201ENST00000578143 78 ntBASIC-0.59□□□□□ -2.5
SLC44A4Q53GD3 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.61□□□□□ -2.51
SLC44A4Q53GD3 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.61□□□□□ -2.51
SLC44A4Q53GD3 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.61□□□□□ -2.51
SLC44A4Q53GD3 SNORD45C-201ENST00000383893 79 ntBASIC-0.61□□□□□ -2.51
SLC44A4Q53GD3 MIR548AX-201ENST00000580117 73 ntBASIC-0.61□□□□□ -2.51
SLC44A4Q53GD3 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.62□□□□□ -2.51
SLC44A4Q53GD3 MIR4520-1-201ENST00000582609 70 ntBASIC-0.62□□□□□ -2.51
SLC44A4Q53GD3 SCARNA17-201ENST00000516183 144 ntBASIC-0.63□□□□□ -2.51
SLC44A4Q53GD3 MIR548AM-201ENST00000584298 74 ntBASIC-0.66□□□□□ -2.52
SLC44A4Q53GD3 RNA5SP266-201ENST00000410273 108 ntBASIC-0.67□□□□□ -2.52
SLC44A4Q53GD3 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.68□□□□□ -2.52
SLC44A4Q53GD3 RNU6-841P-201ENST00000383872 107 ntBASIC-0.68□□□□□ -2.52
SLC44A4Q53GD3 MT-TQ-201ENST00000387372 72 ntBASIC-0.68□□□□□ -2.52
SLC44A4Q53GD3 RNA5SP86-201ENST00000390869 98 ntBASIC-0.68□□□□□ -2.52
SLC44A4Q53GD3 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.69□□□□□ -2.52
SLC44A4Q53GD3 MIR656-201ENST00000385224 78 ntBASIC-0.69□□□□□ -2.52
SLC44A4Q53GD3 RNU6-345P-201ENST00000517001 107 ntBASIC-0.69□□□□□ -2.52
SLC44A4Q53GD3 MIR4306-201ENST00000583390 91 ntBASIC-0.69□□□□□ -2.52
SLC44A4Q53GD3 RNU6-854P-201ENST00000364036 107 ntBASIC-0.71□□□□□ -2.52
SLC44A4Q53GD3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.71□□□□□ -2.52
SLC44A4Q53GD3 Y_RNA.335-201ENST00000365299 96 ntBASIC-0.73□□□□□ -2.53
SLC44A4Q53GD3 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.74□□□□□ -2.53
SLC44A4Q53GD3 AC097484.2-201ENST00000509147 251 ntBASIC-0.74□□□□□ -2.53
SLC44A4Q53GD3 RNU6-133P-201ENST00000383989 107 ntBASIC-0.75□□□□□ -2.53
SLC44A4Q53GD3 RNU6-1091P-201ENST00000363945 107 ntBASIC-0.76□□□□□ -2.53
SLC44A4Q53GD3 Y_RNA.406-201ENST00000383984 100 ntBASIC-0.76□□□□□ -2.53
SLC44A4Q53GD3 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.76□□□□□ -2.53
SLC44A4Q53GD3 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.76□□□□□ -2.53
SLC44A4Q53GD3 RNU6-706P-201ENST00000517229 104 ntBASIC-0.76□□□□□ -2.53
SLC44A4Q53GD3 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.76□□□□□ -2.53
SLC44A4Q53GD3 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.76□□□□□ -2.53
SLC44A4Q53GD3 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.76□□□□□ -2.53
SLC44A4Q53GD3 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.76□□□□□ -2.53
SLC44A4Q53GD3 RNU6-226P-201ENST00000363778 107 ntBASIC-0.77□□□□□ -2.53
SLC44A4Q53GD3 RNU6-894P-201ENST00000517094 105 ntBASIC-0.77□□□□□ -2.53
SLC44A4Q53GD3 MIR5591-201ENST00000578248 65 ntBASIC-0.77□□□□□ -2.53
SLC44A4Q53GD3 MIR4756-201ENST00000577874 78 ntBASIC-0.79□□□□□ -2.54
SLC44A4Q53GD3 MIR4324-201ENST00000584846 72 ntBASIC-0.79□□□□□ -2.54
SLC44A4Q53GD3 AC108019.1-201ENST00000512540 175 ntBASIC-0.81□□□□□ -2.54
SLC44A4Q53GD3 RNU6-1340P-201ENST00000384438 107 ntBASIC-0.82□□□□□ -2.54
SLC44A4Q53GD3 MIR3115-201ENST00000577915 68 ntBASIC-0.83□□□□□ -2.54
SLC44A4Q53GD3 HLA-S-202ENST00000425174 53 ntBASIC-0.84□□□□□ -2.54
SLC44A4Q53GD3 MIR4770-201ENST00000579149 58 ntBASIC-0.84□□□□□ -2.54
SLC44A4Q53GD3 RNU6-983P-201ENST00000516004 103 ntBASIC-0.86□□□□□ -2.55
SLC44A4Q53GD3 SNX3P1X-201ENST00000414887 175 ntBASIC-0.87□□□□□ -2.55
SLC44A4Q53GD3 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms