Protein–RNA interactions for Protein: Q08ER8

ZNF543, Zinc finger protein 543, humanhuman

Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543Q08ER8 SNORD18C-201ENST00000362704 69 ntBASIC-1.5□□□□□ -2.65
ZNF543Q08ER8 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.5□□□□□ -2.65
ZNF543Q08ER8 MIR633-201ENST00000384821 98 ntBASIC-1.5□□□□□ -2.65
ZNF543Q08ER8 RNU6-829P-201ENST00000363700 112 ntBASIC-1.51□□□□□ -2.65
ZNF543Q08ER8 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.51□□□□□ -2.65
ZNF543Q08ER8 MIR601-201ENST00000385256 79 ntBASIC-1.51□□□□□ -2.65
ZNF543Q08ER8 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.51□□□□□ -2.65
ZNF543Q08ER8 MIR4426-201ENST00000640330 63 ntBASIC-1.51□□□□□ -2.65
ZNF543Q08ER8 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.52□□□□□ -2.65
ZNF543Q08ER8 SNORD113-4-201ENST00000364802 75 ntBASIC-1.52□□□□□ -2.65
ZNF543Q08ER8 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.53□□□□□ -2.65
ZNF543Q08ER8 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.53□□□□□ -2.65
ZNF543Q08ER8 MIR548H1-201ENST00000408610 102 ntBASIC-1.54□□□□□ -2.66
ZNF543Q08ER8 RNA5SP461-201ENST00000516451 104 ntBASIC-1.54□□□□□ -2.66
ZNF543Q08ER8 RNU6-841P-201ENST00000383872 107 ntBASIC-1.55□□□□□ -2.66
ZNF543Q08ER8 AC139453.2-201ENST00000487255 133 ntBASIC-1.55□□□□□ -2.66
ZNF543Q08ER8 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.55□□□□□ -2.66
ZNF543Q08ER8 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.56□□□□□ -2.66
ZNF543Q08ER8 RNU6-742P-201ENST00000365289 107 ntBASIC-1.57□□□□□ -2.66
ZNF543Q08ER8 MIR487B-201ENST00000385021 84 ntBASIC-1.57□□□□□ -2.66
ZNF543Q08ER8 AC079150.2-201ENST00000443733 78 ntBASIC-1.59□□□□□ -2.66
ZNF543Q08ER8 RNU6-300P-201ENST00000459080 104 ntBASIC-1.59□□□□□ -2.66
ZNF543Q08ER8 RNA5SP180-201ENST00000516181 101 ntBASIC-1.59□□□□□ -2.66
ZNF543Q08ER8 MIR548AM-201ENST00000584298 74 ntBASIC-1.6□□□□□ -2.67
ZNF543Q08ER8 MIR1285-2-201ENST00000408311 88 ntBASIC-1.61□□□□□ -2.67
ZNF543Q08ER8 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.62□□□□□ -2.67
ZNF543Q08ER8 RNU6-176P-201ENST00000517196 105 ntBASIC-1.62□□□□□ -2.67
ZNF543Q08ER8 MIR365A-201ENST00000362260 87 ntBASIC-1.64□□□□□ -2.67
ZNF543Q08ER8 RNU6-68P-201ENST00000516576 104 ntBASIC-1.64□□□□□ -2.67
ZNF543Q08ER8 RNU6-980P-201ENST00000516925 103 ntBASIC-1.64□□□□□ -2.67
ZNF543Q08ER8 RNU4-33P-201ENST00000364316 85 ntBASIC-1.65□□□□□ -2.67
ZNF543Q08ER8 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.65□□□□□ -2.67
ZNF543Q08ER8 RNU6-226P-201ENST00000363778 107 ntBASIC-1.66□□□□□ -2.68
ZNF543Q08ER8 RNU6-499P-201ENST00000365615 107 ntBASIC-1.66□□□□□ -2.68
ZNF543Q08ER8 MIR548W-201ENST00000581970 74 ntBASIC-1.66□□□□□ -2.68
ZNF543Q08ER8 MIR379-201ENST00000362218 67 ntBASIC-1.67□□□□□ -2.68
ZNF543Q08ER8 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.67□□□□□ -2.68
ZNF543Q08ER8 snoU13.10-201ENST00000459301 103 ntBASIC-1.67□□□□□ -2.68
ZNF543Q08ER8 MIR4441-201ENST00000582623 100 ntBASIC-1.67□□□□□ -2.68
ZNF543Q08ER8 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.68□□□□□ -2.68
ZNF543Q08ER8 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.69□□□□□ -2.68
ZNF543Q08ER8 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.7□□□□□ -2.68
ZNF543Q08ER8 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.7□□□□□ -2.68
ZNF543Q08ER8 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.7□□□□□ -2.68
ZNF543Q08ER8 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.7□□□□□ -2.68
ZNF543Q08ER8 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.72□□□□□ -2.68
ZNF543Q08ER8 AC108019.1-201ENST00000512540 175 ntBASIC-1.72□□□□□ -2.68
ZNF543Q08ER8 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.73□□□□□ -2.69
ZNF543Q08ER8 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.73□□□□□ -2.69
ZNF543Q08ER8 SNORD18.1-201ENST00000363807 70 ntBASIC-1.74□□□□□ -2.69
ZNF543Q08ER8 U4.2-201ENST00000618561 85 ntBASIC-1.74□□□□□ -2.69
ZNF543Q08ER8 MIR1246-201ENST00000636535 73 ntBASIC-1.74□□□□□ -2.69
ZNF543Q08ER8 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.75□□□□□ -2.69
ZNF543Q08ER8 RNU4-88P-201ENST00000411220 86 ntBASIC-1.75□□□□□ -2.69
ZNF543Q08ER8 RNU6-912P-201ENST00000363800 104 ntBASIC-1.76□□□□□ -2.69
ZNF543Q08ER8 SNORD114-3-201ENST00000364969 75 ntBASIC-1.76□□□□□ -2.69
ZNF543Q08ER8 RNU6-788P-201ENST00000390967 104 ntBASIC-1.76□□□□□ -2.69
ZNF543Q08ER8 MIR548AL-201ENST00000578416 97 ntBASIC-1.76□□□□□ -2.69
ZNF543Q08ER8 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.79□□□□□ -2.7
ZNF543Q08ER8 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.79□□□□□ -2.7
ZNF543Q08ER8 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.79□□□□□ -2.7
ZNF543Q08ER8 MIR4756-201ENST00000577874 78 ntBASIC-1.79□□□□□ -2.7
ZNF543Q08ER8 MIR4723-201ENST00000585070 81 ntBASIC-1.8□□□□□ -2.7
ZNF543Q08ER8 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.8□□□□□ -2.7
ZNF543Q08ER8 MIR548H4-201ENST00000408689 111 ntBASIC-1.82□□□□□ -2.7
ZNF543Q08ER8 AC097484.2-201ENST00000509147 251 ntBASIC-1.82□□□□□ -2.7
ZNF543Q08ER8 MIR4317-201ENST00000637586 65 ntBASIC-1.82□□□□□ -2.7
ZNF543Q08ER8 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.84□□□□□ -2.7
ZNF543Q08ER8 MIR664B-201ENST00000626756 61 ntBASIC-1.84□□□□□ -2.7
ZNF543Q08ER8 SNORD113-3-201ENST00000364830 72 ntBASIC-1.85□□□□□ -2.71
ZNF543Q08ER8 RNU6-936P-201ENST00000384005 107 ntBASIC-1.85□□□□□ -2.71
ZNF543Q08ER8 RNU6-838P-201ENST00000363399 108 ntBASIC-1.86□□□□□ -2.71
ZNF543Q08ER8 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.86□□□□□ -2.71
ZNF543Q08ER8 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.86□□□□□ -2.71
ZNF543Q08ER8 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.87□□□□□ -2.71
ZNF543Q08ER8 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.87□□□□□ -2.71
ZNF543Q08ER8 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.87□□□□□ -2.71
ZNF543Q08ER8 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.87□□□□□ -2.71
ZNF543Q08ER8 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.87□□□□□ -2.71
ZNF543Q08ER8 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.87□□□□□ -2.71
ZNF543Q08ER8 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.87□□□□□ -2.71
ZNF543Q08ER8 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.88□□□□□ -2.71
ZNF543Q08ER8 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.88□□□□□ -2.71
ZNF543Q08ER8 MIR1207-201ENST00000408249 87 ntBASIC-1.88□□□□□ -2.71
ZNF543Q08ER8 RNU6-753P-201ENST00000363926 107 ntBASIC-1.89□□□□□ -2.71
ZNF543Q08ER8 RNU6-614P-201ENST00000384369 107 ntBASIC-1.9□□□□□ -2.71
ZNF543Q08ER8 RNU6-983P-201ENST00000516004 103 ntBASIC-1.9□□□□□ -2.71
ZNF543Q08ER8 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.9□□□□□ -2.71
ZNF543Q08ER8 U6.59-201ENST00000615686 107 ntBASIC-1.9□□□□□ -2.71
ZNF543Q08ER8 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.91□□□□□ -2.72
ZNF543Q08ER8 FTX_4.1-201ENST00000616291 147 ntBASIC-1.91□□□□□ -2.72
ZNF543Q08ER8 RNU6-822P-201ENST00000362707 106 ntBASIC-1.92□□□□□ -2.72
ZNF543Q08ER8 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.92□□□□□ -2.72
ZNF543Q08ER8 RNU6-808P-201ENST00000391233 108 ntBASIC-1.92□□□□□ -2.72
ZNF543Q08ER8 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.92□□□□□ -2.72
ZNF543Q08ER8 RNY4P27-201ENST00000363341 96 ntBASIC-1.93□□□□□ -2.72
ZNF543Q08ER8 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.94□□□□□ -2.72
ZNF543Q08ER8 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.94□□□□□ -2.72
ZNF543Q08ER8 MIR1254-1-201ENST00000408257 97 ntBASIC-1.94□□□□□ -2.72
ZNF543Q08ER8 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.95□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 253.7 ms