Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AL590491.3-201ENST00000610731 82 ntBASIC0.41□□□□□ -2.34
COL9A1P20849 RNA5SP134-201ENST00000516492 96 ntBASIC0.4□□□□□ -2.35
COL9A1P20849 SNORD113-3-201ENST00000364830 72 ntBASIC0.39□□□□□ -2.35
COL9A1P20849 RPS29P8-201ENST00000445109 171 ntBASIC0.39□□□□□ -2.35
COL9A1P20849 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.39□□□□□ -2.35
COL9A1P20849 MIR101-1-201ENST00000362265 75 ntBASIC0.38□□□□□ -2.35
COL9A1P20849 RNU6-1034P-201ENST00000365335 101 ntBASIC0.37□□□□□ -2.35
COL9A1P20849 MIR204-201ENST00000385200 110 ntBASIC0.37□□□□□ -2.35
COL9A1P20849 RNU6-892P-201ENST00000410335 99 ntBASIC0.37□□□□□ -2.35
COL9A1P20849 MIR548AX-201ENST00000580117 73 ntBASIC0.37□□□□□ -2.35
COL9A1P20849 SNORD114-9-201ENST00000364370 72 ntBASIC0.36□□□□□ -2.35
COL9A1P20849 RNU6-164P-201ENST00000364604 103 ntBASIC0.36□□□□□ -2.35
COL9A1P20849 Y_RNA.468-201ENST00000384298 102 ntBASIC0.36□□□□□ -2.35
COL9A1P20849 MIR198-201ENST00000637333 62 ntBASIC0.36□□□□□ -2.35
COL9A1P20849 RNU6-983P-201ENST00000516004 103 ntBASIC0.35□□□□□ -2.35
COL9A1P20849 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.35□□□□□ -2.35
COL9A1P20849 MIR6818-201ENST00000621576 65 ntBASIC0.35□□□□□ -2.35
COL9A1P20849 Y_RNA.413-201ENST00000384007 102 ntBASIC0.34□□□□□ -2.36
COL9A1P20849 Y_RNA.754-201ENST00000476024 102 ntBASIC0.34□□□□□ -2.36
COL9A1P20849 MIR4263-201ENST00000584745 83 ntBASIC0.34□□□□□ -2.36
COL9A1P20849 Y_RNA.790-201ENST00000614282 102 ntBASIC0.34□□□□□ -2.36
COL9A1P20849 Y_RNA.782-201ENST00000614695 102 ntBASIC0.34□□□□□ -2.36
COL9A1P20849 SNORD114-5-201ENST00000362928 70 ntBASIC0.33□□□□□ -2.36
COL9A1P20849 Y_RNA.63-201ENST00000362841 102 ntBASIC0.32□□□□□ -2.36
COL9A1P20849 Y_RNA.449-201ENST00000384187 102 ntBASIC0.32□□□□□ -2.36
COL9A1P20849 MIR147A-201ENST00000385079 72 ntBASIC0.32□□□□□ -2.36
COL9A1P20849 MIR548W-201ENST00000581970 74 ntBASIC0.32□□□□□ -2.36
COL9A1P20849 snoU13.10-201ENST00000459301 103 ntBASIC0.31□□□□□ -2.36
COL9A1P20849 Y_RNA.684-201ENST00000516510 99 ntBASIC0.31□□□□□ -2.36
COL9A1P20849 Y_RNA.514-201ENST00000384528 112 ntBASIC0.3□□□□□ -2.36
COL9A1P20849 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC0.3□□□□□ -2.36
COL9A1P20849 MIR4768-201ENST00000585270 74 ntBASIC0.29□□□□□ -2.36
COL9A1P20849 RNU6-431P-201ENST00000383874 107 ntBASIC0.28□□□□□ -2.36
COL9A1P20849 ULK3-223ENST00000631115 126 ntTSL 5 BASIC0.28□□□□□ -2.36
COL9A1P20849 MIR224-201ENST00000384889 81 ntBASIC0.27□□□□□ -2.37
COL9A1P20849 MIR371B-201ENST00000638082 66 ntBASIC0.27□□□□□ -2.37
COL9A1P20849 snoU83B.1-201ENST00000517136 88 ntBASIC0.26□□□□□ -2.37
COL9A1P20849 MIR1295B-201ENST00000636144 60 ntBASIC0.26□□□□□ -2.37
COL9A1P20849 RNU6-400P-201ENST00000391173 106 ntBASIC0.25□□□□□ -2.37
COL9A1P20849 MIR3123-201ENST00000583417 75 ntBASIC0.25□□□□□ -2.37
COL9A1P20849 Y_RNA.484-201ENST00000384389 103 ntBASIC0.24□□□□□ -2.37
COL9A1P20849 MIR124-1-201ENST00000385275 85 ntBASIC0.24□□□□□ -2.37
COL9A1P20849 SNORD64-201ENST00000386683 67 ntBASIC0.24□□□□□ -2.37
COL9A1P20849 AC021146.6-201ENST00000514659 117 ntBASIC0.24□□□□□ -2.37
COL9A1P20849 SNORD114-11-201ENST00000363738 75 ntBASIC0.23□□□□□ -2.37
COL9A1P20849 MIR3666-201ENST00000607845 111 ntBASIC0.23□□□□□ -2.37
COL9A1P20849 SNORA18.1-201ENST00000363418 128 ntBASIC0.22□□□□□ -2.37
COL9A1P20849 RNA5SP451-201ENST00000410588 110 ntBASIC0.22□□□□□ -2.37
COL9A1P20849 AC097484.2-201ENST00000509147 251 ntBASIC0.21□□□□□ -2.38
COL9A1P20849 MIR3681-201ENST00000580089 72 ntBASIC0.21□□□□□ -2.38
COL9A1P20849 MIR6874-201ENST00000635894 71 ntBASIC0.21□□□□□ -2.38
COL9A1P20849 MIR4788-201ENST00000639104 80 ntBASIC0.21□□□□□ -2.38
COL9A1P20849 Y_RNA.55-201ENST00000362797 102 ntBASIC0.2□□□□□ -2.38
COL9A1P20849 Y_RNA.228-201ENST00000364346 98 ntBASIC0.2□□□□□ -2.38
COL9A1P20849 SNORD114-3-201ENST00000364969 75 ntBASIC0.2□□□□□ -2.38
COL9A1P20849 SNORD114-12-201ENST00000365400 75 ntBASIC0.2□□□□□ -2.38
COL9A1P20849 RNU7-134P-201ENST00000458997 64 ntBASIC0.2□□□□□ -2.38
COL9A1P20849 RNA5SP461-201ENST00000516451 104 ntBASIC0.2□□□□□ -2.38
COL9A1P20849 MIR4290-201ENST00000583807 95 ntBASIC0.2□□□□□ -2.38
COL9A1P20849 AC091912.2-201ENST00000624798 167 ntBASIC0.2□□□□□ -2.38
COL9A1P20849 MIR4320-201ENST00000636981 65 ntBASIC0.2□□□□□ -2.38
COL9A1P20849 RNU4-63P-201ENST00000411313 118 ntBASIC0.19□□□□□ -2.38
COL9A1P20849 Y_RNA.647-201ENST00000459194 112 ntBASIC0.19□□□□□ -2.38
COL9A1P20849 Y_RNA.640-201ENST00000459296 112 ntBASIC0.19□□□□□ -2.38
COL9A1P20849 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
COL9A1P20849 Y_RNA.803-201ENST00000614432 112 ntBASIC0.19□□□□□ -2.38
COL9A1P20849 Y_RNA.815-201ENST00000616655 112 ntBASIC0.19□□□□□ -2.38
COL9A1P20849 Y_RNA.795-201ENST00000619475 112 ntBASIC0.19□□□□□ -2.38
COL9A1P20849 MIR382-201ENST00000637119 76 ntBASIC0.19□□□□□ -2.38
COL9A1P20849 Y_RNA.827-201ENST00000638104 112 ntBASIC0.19□□□□□ -2.38
COL9A1P20849 Y_RNA.204-201ENST00000364112 102 ntBASIC0.18□□□□□ -2.38
COL9A1P20849 RNU6-737P-201ENST00000365370 107 ntBASIC0.18□□□□□ -2.38
COL9A1P20849 MIRLET7A2-201ENST00000362105 72 ntBASIC0.17□□□□□ -2.38
COL9A1P20849 RNY4P27-201ENST00000363341 96 ntBASIC0.17□□□□□ -2.38
COL9A1P20849 RNA5SP300-201ENST00000391197 107 ntBASIC0.17□□□□□ -2.38
COL9A1P20849 MIR214-201ENST00000385214 110 ntBASIC0.16□□□□□ -2.38
COL9A1P20849 RNU6-576P-201ENST00000390854 102 ntBASIC0.16□□□□□ -2.38
COL9A1P20849 SNORD114-28-201ENST00000363610 72 ntBASIC0.15□□□□□ -2.39
COL9A1P20849 RNU6-1161P-201ENST00000516176 102 ntBASIC0.15□□□□□ -2.39
COL9A1P20849 MIR8064-201ENST00000612863 90 ntBASIC0.15□□□□□ -2.39
COL9A1P20849 Y_RNA.583-201ENST00000391033 113 ntBASIC0.14□□□□□ -2.39
COL9A1P20849 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
COL9A1P20849 Y_RNA.175-201ENST00000363794 111 ntBASIC0.13□□□□□ -2.39
COL9A1P20849 RNU6-841P-201ENST00000383872 107 ntBASIC0.13□□□□□ -2.39
COL9A1P20849 SNORD4A-201ENST00000459174 72 ntBASIC0.13□□□□□ -2.39
COL9A1P20849 MIR548AH-201ENST00000637109 76 ntBASIC0.13□□□□□ -2.39
COL9A1P20849 Y_RNA.181-201ENST00000363872 101 ntBASIC0.12□□□□□ -2.39
COL9A1P20849 SNORD114-16-201ENST00000363044 70 ntBASIC0.1□□□□□ -2.39
COL9A1P20849 MIR548AM-201ENST00000584298 74 ntBASIC0.1□□□□□ -2.39
COL9A1P20849 SNORD114-14-201ENST00000362723 75 ntBASIC0.09□□□□□ -2.4
COL9A1P20849 SNORA3B-201ENST00000391305 131 ntBASIC0.08□□□□□ -2.4
COL9A1P20849 RNY4P7-201ENST00000364600 96 ntBASIC0.07□□□□□ -2.4
COL9A1P20849 MIR587-201ENST00000384845 96 ntBASIC0.07□□□□□ -2.4
COL9A1P20849 Y_RNA.137-201ENST00000363455 112 ntBASIC0.06□□□□□ -2.4
COL9A1P20849 Y_RNA.403-201ENST00000383977 101 ntBASIC0.06□□□□□ -2.4
COL9A1P20849 Y_RNA.475-201ENST00000384345 101 ntBASIC0.06□□□□□ -2.4
COL9A1P20849 MIR378F-201ENST00000578143 78 ntBASIC0.06□□□□□ -2.4
COL9A1P20849 MIR4436A-201ENST00000585278 85 ntBASIC0.06□□□□□ -2.4
COL9A1P20849 MIR365A-201ENST00000362260 87 ntBASIC0.05□□□□□ -2.4
COL9A1P20849 SNORD114-25-201ENST00000363742 72 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms