Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MIR4317-201ENST00000637586 65 ntBASIC-1.06□□□□□ -2.58
HLA-DOAP06340 RNU6-695P-201ENST00000391157 104 ntBASIC-1.07□□□□□ -2.58
HLA-DOAP06340 RNU6-68P-201ENST00000516576 104 ntBASIC-1.07□□□□□ -2.58
HLA-DOAP06340 RNU6-176P-201ENST00000517196 105 ntBASIC-1.09□□□□□ -2.58
HLA-DOAP06340 SNORD18C-201ENST00000362704 69 ntBASIC-1.1□□□□□ -2.59
HLA-DOAP06340 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.1□□□□□ -2.59
HLA-DOAP06340 RNU6-30P-201ENST00000384561 107 ntBASIC-1.1□□□□□ -2.59
HLA-DOAP06340 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.1□□□□□ -2.59
HLA-DOAP06340 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.11□□□□□ -2.59
HLA-DOAP06340 RNU6-822P-201ENST00000362707 106 ntBASIC-1.13□□□□□ -2.59
HLA-DOAP06340 RNU6-400P-201ENST00000391173 106 ntBASIC-1.13□□□□□ -2.59
HLA-DOAP06340 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.13□□□□□ -2.59
HLA-DOAP06340 MIR378F-201ENST00000578143 78 ntBASIC-1.13□□□□□ -2.59
HLA-DOAP06340 MIR548AX-201ENST00000580117 73 ntBASIC-1.13□□□□□ -2.59
HLA-DOAP06340 RNU4-63P-201ENST00000411313 118 ntBASIC-1.15□□□□□ -2.59
HLA-DOAP06340 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.16□□□□□ -2.6
HLA-DOAP06340 MIR6502-201ENST00000617296 76 ntBASIC-1.16□□□□□ -2.6
HLA-DOAP06340 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.17□□□□□ -2.6
HLA-DOAP06340 RNU6-59P-201ENST00000384787 107 ntBASIC-1.18□□□□□ -2.6
HLA-DOAP06340 RNU6-912P-201ENST00000363800 104 ntBASIC-1.19□□□□□ -2.6
HLA-DOAP06340 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.2□□□□□ -2.6
HLA-DOAP06340 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.21□□□□□ -2.6
HLA-DOAP06340 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.21□□□□□ -2.6
HLA-DOAP06340 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.22□□□□□ -2.6
HLA-DOAP06340 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.22□□□□□ -2.6
HLA-DOAP06340 SCARNA17-201ENST00000516183 144 ntBASIC-1.22□□□□□ -2.6
HLA-DOAP06340 MIR4520-1-201ENST00000582609 70 ntBASIC-1.22□□□□□ -2.6
HLA-DOAP06340 MIR3123-201ENST00000583417 75 ntBASIC-1.22□□□□□ -2.6
HLA-DOAP06340 MIR379-201ENST00000362218 67 ntBASIC-1.24□□□□□ -2.61
HLA-DOAP06340 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.28□□□□□ -2.61
HLA-DOAP06340 MIR4306-201ENST00000583390 91 ntBASIC-1.28□□□□□ -2.61
HLA-DOAP06340 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.29□□□□□ -2.62
HLA-DOAP06340 MIR548H1-201ENST00000408610 102 ntBASIC-1.29□□□□□ -2.62
HLA-DOAP06340 snoU13.10-201ENST00000459301 103 ntBASIC-1.29□□□□□ -2.62
HLA-DOAP06340 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.29□□□□□ -2.62
HLA-DOAP06340 RNA5SP67-201ENST00000516422 131 ntBASIC-1.29□□□□□ -2.62
HLA-DOAP06340 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.3□□□□□ -2.62
HLA-DOAP06340 MIR548W-201ENST00000581970 74 ntBASIC-1.3□□□□□ -2.62
HLA-DOAP06340 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.31□□□□□ -2.62
HLA-DOAP06340 SNORD115.2-201ENST00000391126 59 ntBASIC-1.31□□□□□ -2.62
HLA-DOAP06340 MIR409-201ENST00000362237 79 ntBASIC-1.32□□□□□ -2.62
HLA-DOAP06340 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.32□□□□□ -2.62
HLA-DOAP06340 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.32□□□□□ -2.62
HLA-DOAP06340 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.32□□□□□ -2.62
HLA-DOAP06340 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.34□□□□□ -2.62
HLA-DOAP06340 MIR487B-201ENST00000385021 84 ntBASIC-1.34□□□□□ -2.62
HLA-DOAP06340 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.36□□□□□ -2.63
HLA-DOAP06340 MIR1254-1-201ENST00000408257 97 ntBASIC-1.38□□□□□ -2.63
HLA-DOAP06340 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.39□□□□□ -2.63
HLA-DOAP06340 AL627230.5-201ENST00000619807 58 ntBASIC-1.39□□□□□ -2.63
HLA-DOAP06340 RNU6-841P-201ENST00000383872 107 ntBASIC-1.4□□□□□ -2.63
HLA-DOAP06340 MIR548AM-201ENST00000584298 74 ntBASIC-1.4□□□□□ -2.63
HLA-DOAP06340 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.41□□□□□ -2.64
HLA-DOAP06340 RNA5SP86-201ENST00000390869 98 ntBASIC-1.41□□□□□ -2.64
HLA-DOAP06340 FTX_4.1-201ENST00000616291 147 ntBASIC-1.41□□□□□ -2.64
HLA-DOAP06340 MIR5591-201ENST00000578248 65 ntBASIC-1.42□□□□□ -2.64
HLA-DOAP06340 RNU6-706P-201ENST00000517229 104 ntBASIC-1.43□□□□□ -2.64
HLA-DOAP06340 SNORD113-3-201ENST00000364830 72 ntBASIC-1.44□□□□□ -2.64
HLA-DOAP06340 MIR4324-201ENST00000584846 72 ntBASIC-1.46□□□□□ -2.64
HLA-DOAP06340 AC138207.3-201ENST00000585289 166 ntBASIC-1.46□□□□□ -2.64
HLA-DOAP06340 RNA5SP224-201ENST00000365069 126 ntBASIC-1.47□□□□□ -2.64
HLA-DOAP06340 HLA-S-202ENST00000425174 53 ntBASIC-1.47□□□□□ -2.64
HLA-DOAP06340 U6.103-201ENST00000637085 61 ntBASIC-1.47□□□□□ -2.64
HLA-DOAP06340 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.48□□□□□ -2.65
HLA-DOAP06340 RNU6-836P-201ENST00000362920 107 ntBASIC-1.49□□□□□ -2.65
HLA-DOAP06340 RNA5SP331-201ENST00000364986 107 ntBASIC-1.49□□□□□ -2.65
HLA-DOAP06340 RNA5SP266-201ENST00000410273 108 ntBASIC-1.49□□□□□ -2.65
HLA-DOAP06340 MIR4770-201ENST00000579149 58 ntBASIC-1.51□□□□□ -2.65
HLA-DOAP06340 RNU6-724P-201ENST00000390958 105 ntBASIC-1.52□□□□□ -2.65
HLA-DOAP06340 RNU6-345P-201ENST00000517001 107 ntBASIC-1.54□□□□□ -2.66
HLA-DOAP06340 MIR6738-201ENST00000619620 64 ntBASIC-1.54□□□□□ -2.66
HLA-DOAP06340 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.55□□□□□ -2.66
HLA-DOAP06340 SNORD45C-201ENST00000383893 79 ntBASIC-1.56□□□□□ -2.66
HLA-DOAP06340 AC097484.2-201ENST00000509147 251 ntBASIC-1.56□□□□□ -2.66
HLA-DOAP06340 RNU6-226P-201ENST00000363778 107 ntBASIC-1.57□□□□□ -2.66
HLA-DOAP06340 MIR3115-201ENST00000577915 68 ntBASIC-1.58□□□□□ -2.66
HLA-DOAP06340 SNORD111B-201ENST00000408587 80 ntBASIC-1.6□□□□□ -2.67
HLA-DOAP06340 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.6□□□□□ -2.67
HLA-DOAP06340 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.6□□□□□ -2.67
HLA-DOAP06340 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.6□□□□□ -2.67
HLA-DOAP06340 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.6□□□□□ -2.67
HLA-DOAP06340 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.6□□□□□ -2.67
HLA-DOAP06340 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.6□□□□□ -2.67
HLA-DOAP06340 MIR3165-201ENST00000579874 75 ntBASIC-1.61□□□□□ -2.67
HLA-DOAP06340 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.62□□□□□ -2.67
HLA-DOAP06340 MIR587-201ENST00000384845 96 ntBASIC-1.62□□□□□ -2.67
HLA-DOAP06340 AC108019.1-201ENST00000512540 175 ntBASIC-1.63□□□□□ -2.67
HLA-DOAP06340 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.65□□□□□ -2.67
HLA-DOAP06340 RNU6-10P-201ENST00000384036 107 ntBASIC-1.65□□□□□ -2.67
HLA-DOAP06340 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.65□□□□□ -2.67
HLA-DOAP06340 MIR656-201ENST00000385224 78 ntBASIC-1.65□□□□□ -2.67
HLA-DOAP06340 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.65□□□□□ -2.67
HLA-DOAP06340 MIR4756-201ENST00000577874 78 ntBASIC-1.65□□□□□ -2.67
HLA-DOAP06340 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.66□□□□□ -2.68
HLA-DOAP06340 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.68□□□□□ -2.68
HLA-DOAP06340 SNORD18.1-201ENST00000363807 70 ntBASIC-1.73□□□□□ -2.69
HLA-DOAP06340 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.74□□□□□ -2.69
HLA-DOAP06340 SNX3P1X-201ENST00000414887 175 ntBASIC-1.75□□□□□ -2.69
HLA-DOAP06340 RNU6-485P-201ENST00000363475 107 ntBASIC-1.76□□□□□ -2.69
HLA-DOAP06340 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-1.76□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 259.6 ms