Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.82□□□□□ -2.7
CD74P04233 RNU6-820P-201ENST00000384273 107 ntBASIC-1.82□□□□□ -2.7
CD74P04233 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
CD74P04233 AC097484.2-201ENST00000509147 251 ntBASIC-1.82□□□□□ -2.7
CD74P04233 RNU6-828P-201ENST00000364876 107 ntBASIC-1.83□□□□□ -2.7
CD74P04233 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.83□□□□□ -2.7
CD74P04233 RNU6-663P-201ENST00000391105 106 ntBASIC-1.83□□□□□ -2.7
CD74P04233 SNORA17.4-201ENST00000391287 132 ntBASIC-1.83□□□□□ -2.7
CD74P04233 MIR4748-201ENST00000578076 82 ntBASIC-1.83□□□□□ -2.7
CD74P04233 SNORD60-201ENST00000383903 83 ntBASIC-1.84□□□□□ -2.7
CD74P04233 SNORA40.16-201ENST00000517238 121 ntBASIC-1.84□□□□□ -2.7
CD74P04233 AC062037.1-201ENST00000605302 128 ntBASIC-1.84□□□□□ -2.7
CD74P04233 RNU6-912P-201ENST00000363800 104 ntBASIC-1.85□□□□□ -2.71
CD74P04233 RNU6-361P-201ENST00000364454 107 ntBASIC-1.85□□□□□ -2.71
CD74P04233 RNU6-530P-201ENST00000391180 107 ntBASIC-1.85□□□□□ -2.71
CD74P04233 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.85□□□□□ -2.71
CD74P04233 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.85□□□□□ -2.71
CD74P04233 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.85□□□□□ -2.71
CD74P04233 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.85□□□□□ -2.71
CD74P04233 FTX_4.1-201ENST00000616291 147 ntBASIC-1.85□□□□□ -2.71
CD74P04233 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.85□□□□□ -2.71
CD74P04233 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.85□□□□□ -2.71
CD74P04233 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.85□□□□□ -2.71
CD74P04233 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.86□□□□□ -2.71
CD74P04233 RNU6-634P-201ENST00000459134 106 ntBASIC-1.86□□□□□ -2.71
CD74P04233 SNORA40B-201ENST00000385573 128 ntBASIC-1.87□□□□□ -2.71
CD74P04233 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.88□□□□□ -2.71
CD74P04233 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.88□□□□□ -2.71
CD74P04233 SNORD30.1-201ENST00000391309 70 ntBASIC-1.89□□□□□ -2.71
CD74P04233 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.89□□□□□ -2.71
CD74P04233 RNU6-141P-201ENST00000410499 105 ntBASIC-1.89□□□□□ -2.71
CD74P04233 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.89□□□□□ -2.71
CD74P04233 SNORA25.5-201ENST00000363782 126 ntBASIC-1.9□□□□□ -2.71
CD74P04233 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.9□□□□□ -2.71
CD74P04233 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.9□□□□□ -2.71
CD74P04233 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.9□□□□□ -2.71
CD74P04233 MIR4426-201ENST00000640330 63 ntBASIC-1.91□□□□□ -2.72
CD74P04233 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.92□□□□□ -2.72
CD74P04233 SNORA25.4-201ENST00000363666 124 ntBASIC-1.92□□□□□ -2.72
CD74P04233 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.93□□□□□ -2.72
CD74P04233 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.93□□□□□ -2.72
CD74P04233 RNU6-122P-201ENST00000516818 107 ntBASIC-1.93□□□□□ -2.72
CD74P04233 RNU6-742P-201ENST00000365289 107 ntBASIC-1.94□□□□□ -2.72
CD74P04233 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.94□□□□□ -2.72
CD74P04233 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.94□□□□□ -2.72
CD74P04233 RNY4P7-201ENST00000364600 96 ntBASIC-1.95□□□□□ -2.72
CD74P04233 AL451105.1-201ENST00000450005 189 ntBASIC-1.95□□□□□ -2.72
CD74P04233 MIR1254-1-201ENST00000408257 97 ntBASIC-1.96□□□□□ -2.72
CD74P04233 MIR3202-2-201ENST00000635980 79 ntBASIC-1.96□□□□□ -2.72
CD74P04233 RNU6-590P-201ENST00000365039 107 ntBASIC-1.97□□□□□ -2.72
CD74P04233 RNU6-573P-201ENST00000383938 106 ntBASIC-1.97□□□□□ -2.72
CD74P04233 RNU6-871P-201ENST00000516122 100 ntBASIC-1.97□□□□□ -2.72
CD74P04233 RNA5SP93-201ENST00000362525 114 ntBASIC-1.98□□□□□ -2.73
CD74P04233 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.98□□□□□ -2.73
CD74P04233 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.98□□□□□ -2.73
CD74P04233 RNU6-300P-201ENST00000459080 104 ntBASIC-1.98□□□□□ -2.73
CD74P04233 RNU7-119P-201ENST00000459279 63 ntBASIC-1.98□□□□□ -2.73
CD74P04233 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.98□□□□□ -2.73
CD74P04233 SNORD73B-201ENST00000364394 72 ntBASIC-1.99□□□□□ -2.73
CD74P04233 RNY4P9-201ENST00000363194 97 ntBASIC-2□□□□□ -2.73
CD74P04233 MIR1255A-201ENST00000408338 113 ntBASIC-2□□□□□ -2.73
CD74P04233 MIR379-201ENST00000362218 67 ntBASIC-2.01□□□□□ -2.73
CD74P04233 RNU6-857P-201ENST00000515893 110 ntBASIC-2.01□□□□□ -2.73
CD74P04233 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.02□□□□□ -2.73
CD74P04233 RNA5SP170-201ENST00000517150 101 ntBASIC-2.02□□□□□ -2.73
CD74P04233 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.03□□□□□ -2.73
CD74P04233 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.03□□□□□ -2.73
CD74P04233 U6.111-201ENST00000636093 83 ntBASIC-2.03□□□□□ -2.73
CD74P04233 RNU6-940P-201ENST00000363433 104 ntBASIC-2.04□□□□□ -2.74
CD74P04233 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.04□□□□□ -2.74
CD74P04233 SNORD45.2-201ENST00000363552 72 ntBASIC-2.04□□□□□ -2.74
CD74P04233 RNU6-419P-201ENST00000517030 63 ntBASIC-2.04□□□□□ -2.74
CD74P04233 MIR4511-201ENST00000582784 87 ntBASIC-2.04□□□□□ -2.74
CD74P04233 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.04□□□□□ -2.74
CD74P04233 SNORA26.2-201ENST00000390922 122 ntBASIC-2.05□□□□□ -2.74
CD74P04233 AC103706.3-201ENST00000636297 85 ntBASIC-2.05□□□□□ -2.74
CD74P04233 RNU6-230P-201ENST00000362457 104 ntBASIC-2.06□□□□□ -2.74
CD74P04233 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.06□□□□□ -2.74
CD74P04233 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.06□□□□□ -2.74
CD74P04233 RNY4P29-201ENST00000410801 97 ntBASIC-2.06□□□□□ -2.74
CD74P04233 RNU6-539P-201ENST00000516665 103 ntBASIC-2.06□□□□□ -2.74
CD74P04233 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-2.06□□□□□ -2.74
CD74P04233 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.07□□□□□ -2.74
CD74P04233 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.07□□□□□ -2.74
CD74P04233 RNU6-279P-201ENST00000391297 101 ntBASIC-2.07□□□□□ -2.74
CD74P04233 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.08□□□□□ -2.74
CD74P04233 MIR3938-201ENST00000582157 103 ntBASIC-2.08□□□□□ -2.74
CD74P04233 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.09□□□□□ -2.74
CD74P04233 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.09□□□□□ -2.74
CD74P04233 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.1□□□□□ -2.75
CD74P04233 MIR4679-1-201ENST00000637619 75 ntBASIC-2.1□□□□□ -2.75
CD74P04233 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.11□□□□□ -2.75
CD74P04233 RNU6-176P-201ENST00000517196 105 ntBASIC-2.11□□□□□ -2.75
CD74P04233 RNU6-800P-201ENST00000384473 103 ntBASIC-2.12□□□□□ -2.75
CD74P04233 RNA5SP225-201ENST00000410874 135 ntBASIC-2.12□□□□□ -2.75
CD74P04233 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.14□□□□□ -2.75
CD74P04233 SNORD78.1-201ENST00000390866 65 ntBASIC-2.15□□□□□ -2.75
CD74P04233 RNU6-345P-201ENST00000517001 107 ntBASIC-2.15□□□□□ -2.75
CD74P04233 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.16□□□□□ -2.76
CD74P04233 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.17□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 268 ms